RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 KIAA1211Q6ZU35 1233 aa17.19■□□□□ 0.34
ABCD4-212ENST00000484380 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
ABCD4-212ENST00000484380 KCNB2Q92953 911 aa17.19■□□□□ 0.34
ABCD4-212ENST00000484380 SNX14Q9Y5W7 946 aa17.19■□□□□ 0.34
ABCD4-212ENST00000484380 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
ABCD4-212ENST00000484380 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
ABCD4-212ENST00000484380 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.19■□□□□ 0.34
ABCD4-212ENST00000484380 LRP6O75581 1613 aa17.18■□□□□ 0.34
ABCD4-212ENST00000484380 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
ABCD4-212ENST00000484380 RFX7Q2KHR2 1363 aa17.18■□□□□ 0.34
ABCD4-212ENST00000484380 PTPN12Q05209 780 aaKnown RBP17.18■□□□□ 0.34
ABCD4-212ENST00000484380 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-212ENST00000484380 PKP1Q13835 747 aa17.17■□□□□ 0.34
ABCD4-212ENST00000484380 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
ABCD4-212ENST00000484380 UBE3BQ7Z3V4 1068 aa17.17■□□□□ 0.34
ABCD4-212ENST00000484380 TTC14Q96N46 770 aa17.17■□□□□ 0.34
ABCD4-212ENST00000484380 GZF1Q9H116 711 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-212ENST00000484380 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
ABCD4-212ENST00000484380 WNK3Q9BYP7 1800 aa17.17■□□□□ 0.34
ABCD4-212ENST00000484380 A0A087WZG4 1122 aa17.17■□□□□ 0.34
ABCD4-212ENST00000484380 H7C1W4 665 aa17.17■□□□□ 0.34
ABCD4-212ENST00000484380 JCADQ9P266 1359 aa17.16■□□□□ 0.34
ABCD4-212ENST00000484380 DISP2A7MBM2 1401 aa17.16■□□□□ 0.34
ABCD4-212ENST00000484380 UPF3BQ9BZI7 483 aaKnown RBP17.16■□□□□ 0.34
ABCD4-212ENST00000484380 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
ABCD4-212ENST00000484380 SIL1Q9H173 461 aa17.16■□□□□ 0.34
ABCD4-212ENST00000484380 TLR7Q9NYK1 1049 aaKnown RBP17.16■□□□□ 0.34
ABCD4-212ENST00000484380 ITGB4P16144 1822 aa17.16■□□□□ 0.34
ABCD4-212ENST00000484380 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
ABCD4-212ENST00000484380 KLHDC4Q8TBB5 520 aa17.15■□□□□ 0.34
ABCD4-212ENST00000484380 TM6SF1Q9BZW5 370 aa17.15■□□□□ 0.34
ABCD4-212ENST00000484380 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
ABCD4-212ENST00000484380 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
ABCD4-212ENST00000484380 BRD1O95696 1058 aa17.14■□□□□ 0.34
ABCD4-212ENST00000484380 MRE11P49959 708 aa17.14■□□□□ 0.34
ABCD4-212ENST00000484380 RASEFQ8IZ41 740 aa17.14■□□□□ 0.34
ABCD4-212ENST00000484380 CWC25Q9NXE8 425 aaPredicted RBP17.14■□□□□ 0.34
ABCD4-212ENST00000484380 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
ABCD4-212ENST00000484380 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.33
ABCD4-212ENST00000484380 ATP5JP18859 108 aa17.14■□□□□ 0.33
ABCD4-212ENST00000484380 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
ABCD4-212ENST00000484380 TNNI3KQ59H18 835 aa17.14■□□□□ 0.33
ABCD4-212ENST00000484380 FPGT-TNNI3KV9GXZ4 949 aa17.14■□□□□ 0.33
ABCD4-212ENST00000484380 EVA1CP58658 441 aa17.13■□□□□ 0.33
ABCD4-212ENST00000484380 FOXO4P98177 505 aa17.13■□□□□ 0.33
ABCD4-212ENST00000484380 TTLL7Q6ZT98 887 aa17.13■□□□□ 0.33
ABCD4-212ENST00000484380 CCDC191Q8NCU4 936 aa17.13■□□□□ 0.33
ABCD4-212ENST00000484380 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
ABCD4-212ENST00000484380 LMBRD1Q9NUN5 540 aa17.13■□□□□ 0.33
ABCD4-212ENST00000484380 COL16A1Q07092 1604 aaPredicted RBP17.13■□□□□ 0.33
ABCD4-212ENST00000484380 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
ABCD4-212ENST00000484380 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
ABCD4-212ENST00000484380 PTH1RQ03431 593 aa17.12■□□□□ 0.33
ABCD4-212ENST00000484380 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
ABCD4-212ENST00000484380 MCTP1Q6DN14 999 aa17.12■□□□□ 0.33
ABCD4-212ENST00000484380 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
ABCD4-212ENST00000484380 NMIQ13287 307 aaPredicted RBP17.12■□□□□ 0.33
ABCD4-212ENST00000484380 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
ABCD4-212ENST00000484380 DBNLQ9UJU6 430 aaKnown RBP17.12■□□□□ 0.33
ABCD4-212ENST00000484380 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.11■□□□□ 0.33
ABCD4-212ENST00000484380 SPEF2Q9C093 1822 aa17.11■□□□□ 0.33
ABCD4-212ENST00000484380 A1BGP04217 495 aa17.11■□□□□ 0.33
ABCD4-212ENST00000484380 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
ABCD4-212ENST00000484380 TFCP2Q12800 502 aa17.11■□□□□ 0.33
ABCD4-212ENST00000484380 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
ABCD4-212ENST00000484380 BOLA2Q9H3K6 86 aa17.11■□□□□ 0.33
ABCD4-212ENST00000484380 GPR108Q9NPR9 543 aa17.11■□□□□ 0.33
ABCD4-212ENST00000484380 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
ABCD4-212ENST00000484380 RPAP1Q9BWH6 1393 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-212ENST00000484380 TOM1O60784 492 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 AK2P54819 239 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 VPS53Q5VIR6 699 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 LMBR1LQ6UX01 489 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-212ENST00000484380 ZSWIM6Q9HCJ5 1215 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 LIMCH1Q9UPQ0 1083 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 DDX49Q9Y6V7 483 aaKnown RBP17.1■□□□□ 0.33
ABCD4-212ENST00000484380 UBAP1LF5GYI3 381 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-212ENST00000484380 FAM227BQ96M60 508 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 ATG3Q9NT62 314 aa17.1■□□□□ 0.33
ABCD4-212ENST00000484380 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
ABCD4-212ENST00000484380 ANKRD36CQ5JPF3 1778 aa17.09■□□□□ 0.33
ABCD4-212ENST00000484380 A0A0D9SFI3 127 aa17.08■□□□□ 0.33
ABCD4-212ENST00000484380 ZKSCAN1P17029 563 aaPredicted RBP17.08■□□□□ 0.33
ABCD4-212ENST00000484380 CASTP20810 708 aaKnown RBP17.08■□□□□ 0.33
ABCD4-212ENST00000484380 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.33
ABCD4-212ENST00000484380 PRPF40BQ6NWY9 871 aaKnown RBP17.08■□□□□ 0.33
ABCD4-212ENST00000484380 NOL8Q76FK4 1167 aaKnown RBP17.08■□□□□ 0.33
ABCD4-212ENST00000484380 RUFY3Q7L099 469 aa17.08■□□□□ 0.33
ABCD4-212ENST00000484380 ZNF609O15014 1411 aa17.08■□□□□ 0.32
ABCD4-212ENST00000484380 WDR33Q9C0J8 1336 aaKnown RBP17.08■□□□□ 0.32
ABCD4-212ENST00000484380 CREB3L3Q68CJ9 461 aa17.07■□□□□ 0.32
ABCD4-212ENST00000484380 HAUS7Q99871 368 aa17.07■□□□□ 0.32
ABCD4-212ENST00000484380 CIAO1O76071 339 aa17.07■□□□□ 0.32
ABCD4-212ENST00000484380 IL15P40933 162 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms