RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 ZNF296Q8WUU4 475 aaPredicted RBP9.57□□□□□ -0.88
CHD6-209ENST00000482596 KDM2AQ9Y2K7 1162 aa9.57□□□□□ -0.88
CHD6-209ENST00000482596 TTC28Q96AY4 2481 aa9.57□□□□□ -0.88
CHD6-209ENST00000482596 CNTNAP4Q9C0A0 1308 aa9.56□□□□□ -0.88
CHD6-209ENST00000482596 NME9Q86XW9 330 aa9.56□□□□□ -0.88
CHD6-209ENST00000482596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.56□□□□□ -0.884e-7■■□□□ 14.3
CHD6-209ENST00000482596 GLIS2Q9BZE0 524 aaPredicted RBP9.56□□□□□ -0.88
CHD6-209ENST00000482596 ATG3Q9NT62 314 aa9.56□□□□□ -0.88
CHD6-209ENST00000482596 EYSQ5T1H1 3165 aa9.56□□□□□ -0.88
CHD6-209ENST00000482596 ZNF831Q5JPB2 1677 aa9.55□□□□□ -0.88
CHD6-209ENST00000482596 HUNKP57058 714 aa9.55□□□□□ -0.88
CHD6-209ENST00000482596 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
CHD6-209ENST00000482596 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
CHD6-209ENST00000482596 CSRNP1Q96S65 589 aa9.55□□□□□ -0.88
CHD6-209ENST00000482596 PRO3102Q9H379 93 aa9.55□□□□□ -0.88
CHD6-209ENST00000482596 BCORQ6W2J9 1755 aa9.55□□□□□ -0.88
CHD6-209ENST00000482596 NFIXQ14938 502 aa9.54□□□□□ -0.88
CHD6-209ENST00000482596 Q7L0L9 218 aa9.54□□□□□ -0.88
CHD6-209ENST00000482596 ZNF277Q9NRM2 450 aaPredicted RBP9.54□□□□□ -0.88
CHD6-209ENST00000482596 STXBP5LQ9Y2K9 1186 aa9.54□□□□□ -0.88
CHD6-209ENST00000482596 LAMA2P24043 3122 aaKnown RBP9.53□□□□□ -0.88
CHD6-209ENST00000482596 ARFGEF2Q9Y6D5 1785 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 G3V3G9 751 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 FZD9O00144 591 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 SERPINB2P05120 415 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 TATP17735 454 aaPredicted RBP9.53□□□□□ -0.88
CHD6-209ENST00000482596 SCNN1DP51172 638 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 DLK2Q6UY11 383 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 GPC2Q8N158 579 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 RAPGEF4Q8WZA2 1011 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 TMOD3Q9NYL9 352 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.53□□□□□ -0.88
CHD6-209ENST00000482596 GJA3Q9Y6H8 435 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 CGNL1Q0VF96 1302 aa9.53□□□□□ -0.88
CHD6-209ENST00000482596 KTN1Q86UP2 1357 aaKnown RBP9.52□□□□□ -0.88
CHD6-209ENST00000482596 TBC1D8O95759 1140 aa9.52□□□□□ -0.89
CHD6-209ENST00000482596 RGMBQ6NW40 437 aa9.52□□□□□ -0.89
CHD6-209ENST00000482596 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
CHD6-209ENST00000482596 MAP3K19Q56UN5 1328 aa9.52□□□□□ -0.89
CHD6-209ENST00000482596 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
CHD6-209ENST00000482596 HOXC9P31274 260 aa9.51□□□□□ -0.89
CHD6-209ENST00000482596 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
CHD6-209ENST00000482596 USP50Q70EL3 339 aaPredicted RBP9.51□□□□□ -0.89
CHD6-209ENST00000482596 DEFB123Q8N688 67 aa9.51□□□□□ -0.89
CHD6-209ENST00000482596 BOLA1Q9Y3E2 137 aa9.51□□□□□ -0.89
CHD6-209ENST00000482596 COL4A5P29400 1685 aa9.51□□□□□ -0.89
CHD6-209ENST00000482596 PRUNE2Q8WUY3 3088 aa9.5□□□□□ -0.89
CHD6-209ENST00000482596 FBLN1P23142 703 aa9.5□□□□□ -0.89
CHD6-209ENST00000482596 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
CHD6-209ENST00000482596 PRPF40BQ6NWY9 871 aaKnown RBP9.5□□□□□ -0.89
CHD6-209ENST00000482596 OLFM4Q6UX06 510 aa9.5□□□□□ -0.89
CHD6-209ENST00000482596 NKX1-1Q15270 411 aaPredicted RBP9.49□□□□□ -0.89
CHD6-209ENST00000482596 INTS3Q68E01 1043 aaKnown RBP9.49□□□□□ -0.89
CHD6-209ENST00000482596 DCAF11Q8TEB1 546 aa9.49□□□□□ -0.89
CHD6-209ENST00000482596 MPHOSPH9Q99550 1183 aa9.49□□□□□ -0.89
CHD6-209ENST00000482596 ANKRD26Q9UPS8 1709 aa9.48□□□□□ -0.89
CHD6-209ENST00000482596 ZNF157P51786 506 aaPredicted RBP9.48□□□□□ -0.89
CHD6-209ENST00000482596 FKBP4Q02790 459 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHD6-209ENST00000482596 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
CHD6-209ENST00000482596 MS4A4AQ96JQ5 239 aa9.48□□□□□ -0.89
CHD6-209ENST00000482596 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
CHD6-209ENST00000482596 TJP1Q07157 1748 aa9.48□□□□□ -0.89
CHD6-209ENST00000482596 GPR25O00155 361 aa9.47□□□□□ -0.89
CHD6-209ENST00000482596 ZPR1O75312 459 aa9.47□□□□□ -0.89
CHD6-209ENST00000482596 FBXO22Q8NEZ5 403 aa9.47□□□□□ -0.89
CHD6-209ENST00000482596 C7orf43Q8WVR3 580 aa9.47□□□□□ -0.89
CHD6-209ENST00000482596 CCDC102AQ96A19 550 aa9.47□□□□□ -0.89
CHD6-209ENST00000482596 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
CHD6-209ENST00000482596 MTMR10Q9NXD2 777 aa9.47□□□□□ -0.89
CHD6-209ENST00000482596 CENPJQ9HC77 1338 aaPredicted RBP9.47□□□□□ -0.89
CHD6-209ENST00000482596 SLC10A3P09131 477 aa9.46□□□□□ -0.9
CHD6-209ENST00000482596 IARSP41252 1262 aaKnown RBP9.46□□□□□ -0.9
CHD6-209ENST00000482596 SBNO2Q9Y2G9 1366 aa9.46□□□□□ -0.9
CHD6-209ENST00000482596 TMEM265A0A087WTH1 108 aa9.45□□□□□ -0.9
CHD6-209ENST00000482596 CCDC93Q567U6 631 aa9.45□□□□□ -0.9
CHD6-209ENST00000482596 SOGA3Q5TF21 947 aa9.45□□□□□ -0.9
CHD6-209ENST00000482596 ANKRD13DQ6ZTN6 518 aa9.45□□□□□ -0.9
CHD6-209ENST00000482596 R3HDMLQ9H3Y0 253 aa9.45□□□□□ -0.9
CHD6-209ENST00000482596 LOC105371045A0A1W2PR82 267 aa9.44□□□□□ -0.9
CHD6-209ENST00000482596 PDE6BP35913 854 aa9.44□□□□□ -0.9
CHD6-209ENST00000482596 AMPHP49418 695 aa9.44□□□□□ -0.9
CHD6-209ENST00000482596 INTS5Q6P9B9 1019 aaKnown RBP9.44□□□□□ -0.9
CHD6-209ENST00000482596 USP48Q86UV5 1035 aa9.44□□□□□ -0.9
CHD6-209ENST00000482596 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
CHD6-209ENST00000482596 BRIP1Q9BX63 1249 aa9.44□□□□□ -0.9
CHD6-209ENST00000482596 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
CHD6-209ENST00000482596 ADARB2Q9NS39 739 aaKnown RBP9.44□□□□□ -0.9
CHD6-209ENST00000482596 PGAP2Q9UHJ9 254 aa9.44□□□□□ -0.9
CHD6-209ENST00000482596 PIEZO1Q92508 2521 aa9.43□□□□□ -0.9
CHD6-209ENST00000482596 POLR2AP24928 1970 aaKnown RBP9.43□□□□□ -0.9
CHD6-209ENST00000482596 FKTNO75072 461 aa9.43□□□□□ -0.9
CHD6-209ENST00000482596 HIRAP54198 1017 aaPredicted RBP9.43□□□□□ -0.9
CHD6-209ENST00000482596 EIF6P56537 245 aaKnown RBP9.43□□□□□ -0.9
CHD6-209ENST00000482596 MAP3K12Q12852 859 aa9.43□□□□□ -0.9
CHD6-209ENST00000482596 DPF3Q92784 378 aa9.43□□□□□ -0.9
CHD6-209ENST00000482596 FAM163AQ96GL9 167 aaPredicted RBP9.43□□□□□ -0.9
CHD6-209ENST00000482596 GBA2Q9HCG7 927 aaPredicted RBP9.43□□□□□ -0.9
CHD6-209ENST00000482596 TRIM17Q9Y577 477 aa9.43□□□□□ -0.9
CHD6-209ENST00000482596 PTCD1O75127 700 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms