RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ALKBH2Q6NS38 261 aa6.15□□□□□ -1.42
VPS41-212ENST00000482217 SVOPQ8N4V2 548 aa6.15□□□□□ -1.42
VPS41-212ENST00000482217 RHPN1Q8TCX5 695 aa6.15□□□□□ -1.42
VPS41-212ENST00000482217 ANKIB1Q9P2G1 1089 aa6.15□□□□□ -1.42
VPS41-212ENST00000482217 BIN2Q9UBW5 565 aaPredicted RBP6.15□□□□□ -1.42
VPS41-212ENST00000482217 IGF1RP08069 1367 aa6.15□□□□□ -1.43
VPS41-212ENST00000482217 MAP3K10Q02779 954 aa6.14□□□□□ -1.43
VPS41-212ENST00000482217 DGKZQ13574 1117 aa6.14□□□□□ -1.43
VPS41-212ENST00000482217 MTMR3Q13615 1198 aa6.14□□□□□ -1.43
VPS41-212ENST00000482217 ECM1Q16610 540 aa6.14□□□□□ -1.43
VPS41-212ENST00000482217 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
VPS41-212ENST00000482217 ZNF385CQ66K41 422 aaPredicted RBP6.14□□□□□ -1.43
VPS41-212ENST00000482217 E9PSI1 815 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 ARHGAP4P98171 946 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 NOM1Q5C9Z4 860 aaKnown RBP6.13□□□□□ -1.43
VPS41-212ENST00000482217 TAF7LQ5H9L4 462 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 SAMD5Q5TGI4 173 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 IER5Q5VY09 327 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 BICDL1Q6ZP65 573 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 IFT43Q96FT9 208 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 ENAMQ9NRM1 1142 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 NDFIP2Q9NV92 336 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 PCDHGC4Q9Y5F7 938 aa6.13□□□□□ -1.43
VPS41-212ENST00000482217 A0A1W2PNR3 127 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 TGFBR3LH3BV60 316 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 RNF225M0QZC1 329 aaPredicted RBP6.12□□□□□ -1.43
VPS41-212ENST00000482217 ERCC3P19447 782 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 MPSTP25325 297 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 EIF1AXP47813 144 aaKnown RBP6.12□□□□□ -1.43
VPS41-212ENST00000482217 SUSD3Q96L08 255 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 ZIC5Q96T25 663 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 ZCCHC2Q9C0B9 1178 aaKnown RBP6.12□□□□□ -1.43
VPS41-212ENST00000482217 NEUROD4Q9HD90 331 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 KLK14Q9P0G3 267 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 GJA3Q9Y6H8 435 aa6.12□□□□□ -1.43
VPS41-212ENST00000482217 ATXN7O15265 892 aaPredicted RBP6.11□□□□□ -1.43
VPS41-212ENST00000482217 BNIP3LO60238 219 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 ARHGEF15O94989 841 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 CELA2BP08218 269 aaPredicted RBP6.11□□□□□ -1.43
VPS41-212ENST00000482217 FAM157BP0CG42 384 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 FGFR3P22607 806 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 MARSP56192 900 aaKnown RBP6.11□□□□□ -1.43
VPS41-212ENST00000482217 LAMC2Q13753 1193 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 FAM182BQ5T319 152 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 ETFBKMTQ8IXQ9 262 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 ABHD17AQ96GS6 310 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 FAM13BQ9NYF5 915 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 DCTN4Q9UJW0 460 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 GDF2Q9UK05 429 aaPredicted RBP6.11□□□□□ -1.43
VPS41-212ENST00000482217 ADAMTS8Q9UP79 889 aa6.11□□□□□ -1.43
VPS41-212ENST00000482217 NDUFB5O43674 189 aa6.1□□□□□ -1.43
VPS41-212ENST00000482217 BCRP11274 1271 aa6.1□□□□□ -1.43
VPS41-212ENST00000482217 LYPD4Q6UWN0 246 aa6.1□□□□□ -1.43
VPS41-212ENST00000482217 TREML1Q86YW5 311 aa6.1□□□□□ -1.43
VPS41-212ENST00000482217 CITED4Q96RK1 184 aa6.1□□□□□ -1.43
VPS41-212ENST00000482217 OXCT2Q9BYC2 517 aaPredicted RBP6.1□□□□□ -1.43
VPS41-212ENST00000482217 BCS1LQ9Y276 419 aa6.1□□□□□ -1.43
VPS41-212ENST00000482217 FZD6O60353 706 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 MICAL2O94851 1124 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 BMP4P12644 408 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 ZAP70P43403 619 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 GOLGA6L1Q8N7Z2 621 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 WHAMMQ8TF30 809 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 ACDQ96AP0 544 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 RBCK1Q9BYM8 510 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 BCL11AQ9H165 835 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 DMGDHQ9UI17 866 aaKnown RBP6.09□□□□□ -1.43
VPS41-212ENST00000482217 BRPF3Q9ULD4 1205 aa6.09□□□□□ -1.43
VPS41-212ENST00000482217 ZBTB39O15060 712 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 RPLP1P05386 114 aaKnown RBP6.08□□□□□ -1.44
VPS41-212ENST00000482217 ARAFP10398 606 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 MAPTP10636 758 aaKnown RBP6.08□□□□□ -1.44
VPS41-212ENST00000482217 MAPK1P28482 360 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 MZF1P28698 734 aaPredicted RBP6.08□□□□□ -1.44
VPS41-212ENST00000482217 USP5P45974 858 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 TNP2Q05952 138 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 AAMPQ13685 434 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 FAM26DQ5JW98 314 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 DNAJC14Q6Y2X3 702 aaPredicted RBP6.08□□□□□ -1.44
VPS41-212ENST00000482217 LRRC69Q6ZNQ3 347 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 BTLAQ7Z6A9 289 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 ZSCAN29Q8IWY8 852 aaPredicted RBP6.08□□□□□ -1.44
VPS41-212ENST00000482217 ZNF280CQ8ND82 737 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 KLRG1Q96E93 195 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 SCARF2Q96GP6 870 aaPredicted RBP6.08□□□□□ -1.44
VPS41-212ENST00000482217 HSH2DQ96JZ2 352 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 ASB16Q96NS5 453 aa6.08□□□□□ -1.44
VPS41-212ENST00000482217 CWC22Q9HCG8 908 aaKnown RBP6.08□□□□□ -1.44
VPS41-212ENST00000482217 AVENQ9NQS1 362 aaPredicted RBP6.08□□□□□ -1.44
VPS41-212ENST00000482217 EFSO43281 561 aa6.07□□□□□ -1.44
VPS41-212ENST00000482217 OIP5O43482 229 aa6.07□□□□□ -1.44
VPS41-212ENST00000482217 PCSK2P16519 638 aa6.07□□□□□ -1.44
VPS41-212ENST00000482217 ARSDP51689 593 aa6.07□□□□□ -1.44
VPS41-212ENST00000482217 KCNMA1Q12791 1236 aa6.07□□□□□ -1.44
VPS41-212ENST00000482217 SLCO4C1Q6ZQN7 724 aa6.07□□□□□ -1.44
VPS41-212ENST00000482217 C11orf16Q9NQ32 467 aa6.07□□□□□ -1.44
VPS41-212ENST00000482217 DCDC2BA2VCK2 349 aa6.06□□□□□ -1.44
VPS41-212ENST00000482217 KHNYNO15037 678 aaKnown RBP6.06□□□□□ -1.44
VPS41-212ENST00000482217 EPB42P16452 691 aa6.06□□□□□ -1.44
VPS41-212ENST00000482217 INPP5BP32019 993 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms