RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 CCDC88AQ3V6T2 1871 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 APLP1P51693 650 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 DUSP27Q5VZP5 1158 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 C3orf67Q6ZVT6 689 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 PPP1R42Q7Z4L9 355 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 UTP14AQ9BVJ6 771 aaKnown RBP12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
TMEM39A-207ENST00000482162 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
TMEM39A-207ENST00000482162 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
TMEM39A-207ENST00000482162 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
TMEM39A-207ENST00000482162 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
TMEM39A-207ENST00000482162 PSMD1Q99460 953 aa12.67□□□□□ -0.38
TMEM39A-207ENST00000482162 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
TMEM39A-207ENST00000482162 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
TMEM39A-207ENST00000482162 GNAI1P63096 354 aa12.66□□□□□ -0.38
TMEM39A-207ENST00000482162 CCDC27Q2M243 656 aa12.66□□□□□ -0.38
TMEM39A-207ENST00000482162 HDGFL1Q5TGJ6 251 aa12.66□□□□□ -0.38
TMEM39A-207ENST00000482162 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
TMEM39A-207ENST00000482162 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
TMEM39A-207ENST00000482162 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
TMEM39A-207ENST00000482162 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
TMEM39A-207ENST00000482162 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
TMEM39A-207ENST00000482162 ZNF316A6NFI3 1004 aaPredicted RBP12.65□□□□□ -0.38
TMEM39A-207ENST00000482162 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
TMEM39A-207ENST00000482162 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
TMEM39A-207ENST00000482162 SMC1BQ8NDV3 1235 aa12.65□□□□□ -0.38
TMEM39A-207ENST00000482162 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
TMEM39A-207ENST00000482162 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
TMEM39A-207ENST00000482162 NLRP3Q96P20 1036 aa12.65□□□□□ -0.38
TMEM39A-207ENST00000482162 FZD9O00144 591 aa12.64□□□□□ -0.39
TMEM39A-207ENST00000482162 DDNO94850 711 aaPredicted RBP12.64□□□□□ -0.39
TMEM39A-207ENST00000482162 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
TMEM39A-207ENST00000482162 SYNE4Q8N205 404 aa12.64□□□□□ -0.39
TMEM39A-207ENST00000482162 RPGRQ92834 1020 aaKnown RBP12.64□□□□□ -0.39
TMEM39A-207ENST00000482162 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
TMEM39A-207ENST00000482162 ZNF277Q9NRM2 450 aaPredicted RBP12.64□□□□□ -0.39
TMEM39A-207ENST00000482162 TIAM2Q8IVF5 1701 aa12.63□□□□□ -0.39
TMEM39A-207ENST00000482162 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
TMEM39A-207ENST00000482162 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
TMEM39A-207ENST00000482162 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
TMEM39A-207ENST00000482162 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
TMEM39A-207ENST00000482162 BBOX1O75936 387 aa12.62□□□□□ -0.39
TMEM39A-207ENST00000482162 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
TMEM39A-207ENST00000482162 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 HCLS1P14317 486 aaPredicted RBP12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 SF3B3Q15393 1217 aaKnown RBP12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 SP8Q8IXZ3 490 aa12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 RTFDC1Q9BY42 306 aaPredicted RBP12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 VPS33BQ9H267 617 aa12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 TRMT112Q9UI30 125 aaKnown RBP12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 IL16Q14005 1332 aa12.61□□□□□ -0.39
TMEM39A-207ENST00000482162 PPEF1O14829 653 aaPredicted RBP12.6□□□□□ -0.39
TMEM39A-207ENST00000482162 SLC51AQ86UW1 340 aa12.6□□□□□ -0.39
TMEM39A-207ENST00000482162 TSPYL6Q8N831 410 aa12.6□□□□□ -0.39
TMEM39A-207ENST00000482162 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
TMEM39A-207ENST00000482162 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
TMEM39A-207ENST00000482162 ABCC4O15439 1325 aa12.6□□□□□ -0.39
TMEM39A-207ENST00000482162 ZNF541Q9H0D2 1346 aa12.6□□□□□ -0.39
TMEM39A-207ENST00000482162 COL4A5P29400 1685 aa12.59□□□□□ -0.39
TMEM39A-207ENST00000482162 IQCA1LA6NCM1 817 aa12.59□□□□□ -0.39
TMEM39A-207ENST00000482162 ELL2O00472 640 aaPredicted RBP12.59□□□□□ -0.39
TMEM39A-207ENST00000482162 GPC2Q8N158 579 aa12.59□□□□□ -0.39
TMEM39A-207ENST00000482162 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
TMEM39A-207ENST00000482162 PHAXQ9H814 394 aaKnown RBP12.59□□□□□ -0.39
TMEM39A-207ENST00000482162 ATP5J2-PTCD1G3V325 749 aa12.58□□□□□ -0.4
TMEM39A-207ENST00000482162 HTRA3P83110 453 aa12.58□□□□□ -0.4
TMEM39A-207ENST00000482162 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
TMEM39A-207ENST00000482162 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
TMEM39A-207ENST00000482162 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
TMEM39A-207ENST00000482162 MRS2Q9HD23 443 aa12.58□□□□□ -0.4
TMEM39A-207ENST00000482162 ANP32CO43423 234 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 GRAPQ13588 217 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 CCDC191Q8NCU4 936 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 FAM89AQ96GI7 184 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 SCN4AP35499 1836 aa12.57□□□□□ -0.4
TMEM39A-207ENST00000482162 ITGBL1O95965 494 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 LDHDQ86WU2 507 aa12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 METTL22Q9BUU2 404 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 HACL1Q9UJ83 578 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms