RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 SCNN1DP51172 638 aa23.2■■□□□ 1.3
RXRB-203ENST00000481441 LMOD1P29536 600 aaPredicted RBP23.19■■□□□ 1.3
RXRB-203ENST00000481441 EPS15P42566 896 aa23.19■■□□□ 1.3
RXRB-203ENST00000481441 NUTM1Q86Y26 1132 aa23.19■■□□□ 1.3
RXRB-203ENST00000481441 CAPNS2Q96L46 248 aa23.19■■□□□ 1.3
RXRB-203ENST00000481441 HOXA10P31260 410 aaPredicted RBP23.18■■□□□ 1.3
RXRB-203ENST00000481441 DCTN1Q14203 1278 aa23.18■■□□□ 1.3
RXRB-203ENST00000481441 CFAP53Q96M91 514 aa23.18■■□□□ 1.3
RXRB-203ENST00000481441 NYXQ9GZU5 481 aa23.18■■□□□ 1.3
RXRB-203ENST00000481441 ECE1P42892 770 aa23.17■■□□□ 1.3
RXRB-203ENST00000481441 CST9Q5W186 159 aa23.17■■□□□ 1.3
RXRB-203ENST00000481441 RIC1Q4ADV7 1423 aa23.17■■□□□ 1.3
RXRB-203ENST00000481441 HTATSF1O43719 755 aaKnown RBP23.16■■□□□ 1.3
RXRB-203ENST00000481441 GRIPAP1Q4V328 841 aa23.16■■□□□ 1.3
RXRB-203ENST00000481441 CYP4F22Q6NT55 531 aa23.16■■□□□ 1.3
RXRB-203ENST00000481441 GPR101Q96P66 508 aaPredicted RBP23.16■■□□□ 1.3
RXRB-203ENST00000481441 ERVV-1B6SEH8 477 aa23.15■■□□□ 1.3
RXRB-203ENST00000481441 PAXIP1Q6ZW49 1069 aaPredicted RBP23.15■■□□□ 1.3
RXRB-203ENST00000481441 USP50Q70EL3 339 aaPredicted RBP23.15■■□□□ 1.3
RXRB-203ENST00000481441 SLC51AQ86UW1 340 aa23.15■■□□□ 1.3
RXRB-203ENST00000481441 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
RXRB-203ENST00000481441 NUDCQ9Y266 331 aa23.15■■□□□ 1.3
RXRB-203ENST00000481441 IBTKQ9P2D0 1353 aaPredicted RBP23.15■■□□□ 1.3
RXRB-203ENST00000481441 TRAF5O00463 557 aa23.14■■□□□ 1.3
RXRB-203ENST00000481441 U2AF1L5P0DN76 240 aaPredicted RBP23.14■■□□□ 1.3
RXRB-203ENST00000481441 U2AF1Q01081 240 aaKnown RBP eCLIP23.14■■□□□ 1.33e-7■■■■□ 26
RXRB-203ENST00000481441 TAF7Q15545 349 aaPredicted RBP23.14■■□□□ 1.3
RXRB-203ENST00000481441 RPGRQ92834 1020 aaKnown RBP23.14■■□□□ 1.3
RXRB-203ENST00000481441 BEGAINQ9BUH8 593 aa23.14■■□□□ 1.3
RXRB-203ENST00000481441 TLL2Q9Y6L7 1015 aa23.14■■□□□ 1.3
RXRB-203ENST00000481441 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
RXRB-203ENST00000481441 CRAMP1Q96RY5 1269 aa23.13■■□□□ 1.29
RXRB-203ENST00000481441 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
RXRB-203ENST00000481441 MAP3K15Q6ZN16 1313 aa23.13■■□□□ 1.29
RXRB-203ENST00000481441 KDM3BQ7LBC6 1761 aa23.13■■□□□ 1.29
RXRB-203ENST00000481441 CCDC85CA6NKD9 419 aa23.12■■□□□ 1.29
RXRB-203ENST00000481441 RGS19P49795 217 aa23.12■■□□□ 1.29
RXRB-203ENST00000481441 GRM1Q13255 1194 aa23.12■■□□□ 1.29
RXRB-203ENST00000481441 NGEFQ8N5V2 710 aa23.12■■□□□ 1.29
RXRB-203ENST00000481441 UBN2Q6ZU65 1347 aa23.12■■□□□ 1.29
RXRB-203ENST00000481441 TTLL7Q6ZT98 887 aa23.11■■□□□ 1.29
RXRB-203ENST00000481441 PPEF1O14829 653 aaPredicted RBP23.1■■□□□ 1.29
RXRB-203ENST00000481441 MAP2K2P36507 400 aa23.1■■□□□ 1.29
RXRB-203ENST00000481441 MLLT1Q03111 559 aaPredicted RBP23.1■■□□□ 1.29
RXRB-203ENST00000481441 SUSD4Q5VX71 490 aa23.1■■□□□ 1.29
RXRB-203ENST00000481441 NIM1KQ8IY84 436 aa23.1■■□□□ 1.29
RXRB-203ENST00000481441 AOC2O75106 756 aa23.09■■□□□ 1.29
RXRB-203ENST00000481441 GPTP24298 496 aa23.09■■□□□ 1.29
RXRB-203ENST00000481441 RBM17Q96I25 401 aaKnown RBP23.09■■□□□ 1.29
RXRB-203ENST00000481441 GPRC5DQ9NZD1 345 aa23.09■■□□□ 1.29
RXRB-203ENST00000481441 DLG5Q8TDM6 1919 aa23.09■■□□□ 1.29
RXRB-203ENST00000481441 TCERG1O14776 1098 aaKnown RBP23.08■■□□□ 1.29
RXRB-203ENST00000481441 KIF6Q6ZMV9 814 aa23.08■■□□□ 1.29
RXRB-203ENST00000481441 C3orf67Q6ZVT6 689 aa23.08■■□□□ 1.29
RXRB-203ENST00000481441 ADARB2Q9NS39 739 aaKnown RBP23.08■■□□□ 1.29
RXRB-203ENST00000481441 TSKSQ9UJT2 592 aa23.08■■□□□ 1.29
RXRB-203ENST00000481441 PPIP5K2O43314 1243 aa23.08■■□□□ 1.28
RXRB-203ENST00000481441 NTSR2O95665 410 aa23.08■■□□□ 1.28
RXRB-203ENST00000481441 SAPCD2Q86UD0 394 aa23.08■■□□□ 1.28
RXRB-203ENST00000481441 ZNF34Q8IZ26 560 aa23.08■■□□□ 1.28
RXRB-203ENST00000481441 ZBTB3Q9H5J0 574 aa23.08■■□□□ 1.28
RXRB-203ENST00000481441 RRP7AQ9Y3A4 280 aaKnown RBP23.08■■□□□ 1.28
RXRB-203ENST00000481441 AOC3Q16853 763 aa23.07■■□□□ 1.28
RXRB-203ENST00000481441 VPS33BQ9H267 617 aa23.07■■□□□ 1.28
RXRB-203ENST00000481441 CASP8AP2Q9UKL3 1982 aa23.07■■□□□ 1.28
RXRB-203ENST00000481441 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
RXRB-203ENST00000481441 MYL6BP14649 208 aa23.05■■□□□ 1.28
RXRB-203ENST00000481441 EIF4A1P60842 406 aaKnown RBP23.05■■□□□ 1.28
RXRB-203ENST00000481441 CXCL9Q07325 125 aa23.05■■□□□ 1.28
RXRB-203ENST00000481441 PNISRQ8TF01 805 aaKnown RBP23.05■■□□□ 1.28
RXRB-203ENST00000481441 ATP6V0A2Q9Y487 856 aa23.05■■□□□ 1.28
RXRB-203ENST00000481441 CA12O43570 354 aa23.04■■□□□ 1.28
RXRB-203ENST00000481441 CELF2O95319 508 aaKnown RBP23.04■■□□□ 1.28
RXRB-203ENST00000481441 GIGYF2Q6Y7W6 1299 aaKnown RBP23.04■■□□□ 1.28
RXRB-203ENST00000481441 HHIPL1Q96JK4 782 aa23.04■■□□□ 1.28
RXRB-203ENST00000481441 PGAP2Q9UHJ9 254 aa23.04■■□□□ 1.28
RXRB-203ENST00000481441 ZNRF3Q9ULT6 936 aa23.04■■□□□ 1.28
RXRB-203ENST00000481441 RTFDC1Q9BY42 306 aaPredicted RBP23.03■■□□□ 1.28
RXRB-203ENST00000481441 GLIS2Q9BZE0 524 aaPredicted RBP23.03■■□□□ 1.28
RXRB-203ENST00000481441 GMPSP49915 693 aaPredicted RBP23.02■■□□□ 1.28
RXRB-203ENST00000481441 NLRP3Q96P20 1036 aa23.02■■□□□ 1.28
RXRB-203ENST00000481441 MCOLN1Q9GZU1 580 aa23.02■■□□□ 1.28
RXRB-203ENST00000481441 BRPF1P55201 1214 aaPredicted RBP23.01■■□□□ 1.27
RXRB-203ENST00000481441 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
RXRB-203ENST00000481441 SLC10A5Q5PT55 438 aa23.01■■□□□ 1.27
RXRB-203ENST00000481441 PPP1R42Q7Z4L9 355 aa23.01■■□□□ 1.27
RXRB-203ENST00000481441 TMX4Q9H1E5 349 aaPredicted RBP23.01■■□□□ 1.27
RXRB-203ENST00000481441 LAMB2P55268 1798 aa23■■□□□ 1.27
RXRB-203ENST00000481441 ABCC4O15439 1325 aa23■■□□□ 1.27
RXRB-203ENST00000481441 CDHR2Q9BYE9 1310 aa23■■□□□ 1.27
RXRB-203ENST00000481441 HIRAP54198 1017 aaPredicted RBP23■■□□□ 1.27
RXRB-203ENST00000481441 SUPT20HQ8NEM7 779 aa23■■□□□ 1.27
RXRB-203ENST00000481441 ERBB4Q15303 1308 aa22.99■■□□□ 1.27
RXRB-203ENST00000481441 ZC3H15Q8WU90 426 aaKnown RBP22.99■■□□□ 1.27
RXRB-203ENST00000481441 ANKRD36CQ5JPF3 1778 aa22.98■■□□□ 1.27
RXRB-203ENST00000481441 CIAPIN1Q6FI81 312 aa22.98■■□□□ 1.27
RXRB-203ENST00000481441 LRP10Q7Z4F1 713 aa22.98■■□□□ 1.27
RXRB-203ENST00000481441 KIAA2012Q0VF49 1180 aa22.97■■□□□ 1.27
RXRB-203ENST00000481441 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
RXRB-203ENST00000481441 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms