RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 TMX4Q9H1E5 349 aaPredicted RBP19.85■□□□□ 0.77
CDK9-203ENST00000480353 HYPKQ9NX55 129 aa19.85■□□□□ 0.77
CDK9-203ENST00000480353 ELL2O00472 640 aaPredicted RBP19.84■□□□□ 0.77
CDK9-203ENST00000480353 TOMM70O94826 608 aa19.84■□□□□ 0.77
CDK9-203ENST00000480353 LRP10Q7Z4F1 713 aa19.84■□□□□ 0.77
CDK9-203ENST00000480353 RBM17Q96I25 401 aaKnown RBP19.84■□□□□ 0.77
CDK9-203ENST00000480353 RRAGCQ9HB90 399 aa19.84■□□□□ 0.77
CDK9-203ENST00000480353 LTBP3Q9NS15 1303 aa19.83■□□□□ 0.77
CDK9-203ENST00000480353 NTSR2O95665 410 aa19.83■□□□□ 0.77
CDK9-203ENST00000480353 ZNF853P0CG23 659 aa19.83■□□□□ 0.77
CDK9-203ENST00000480353 IFFO2Q5TF58 517 aa19.83■□□□□ 0.77
CDK9-203ENST00000480353 RTKN2Q8IZC4 609 aa19.83■□□□□ 0.77
CDK9-203ENST00000480353 TCIRG1Q13488 830 aa19.82■□□□□ 0.76
CDK9-203ENST00000480353 ANKRD13DQ6ZTN6 518 aa19.82■□□□□ 0.76
CDK9-203ENST00000480353 TRMT112Q9UI30 125 aaKnown RBP19.82■□□□□ 0.76
CDK9-203ENST00000480353 RNF123Q5XPI4 1314 aa19.81■□□□□ 0.76
CDK9-203ENST00000480353 GLTPD2A6NH11 291 aa19.81■□□□□ 0.76
CDK9-203ENST00000480353 GOLGA2Q08379 1002 aa19.81■□□□□ 0.76
CDK9-203ENST00000480353 PLBD2Q8NHP8 589 aa19.81■□□□□ 0.76
CDK9-203ENST00000480353 RIC1Q4ADV7 1423 aa19.81■□□□□ 0.76
CDK9-203ENST00000480353 FKBP4Q02790 459 aaKnown RBP eCLIP19.8■□□□□ 0.76
CDK9-203ENST00000480353 CRY2Q49AN0 593 aa19.8■□□□□ 0.76
CDK9-203ENST00000480353 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
CDK9-203ENST00000480353 HSPA6P17066 643 aa19.79■□□□□ 0.76
CDK9-203ENST00000480353 PRELPP51888 382 aa19.79■□□□□ 0.76
CDK9-203ENST00000480353 CCDC27Q2M243 656 aa19.79■□□□□ 0.76
CDK9-203ENST00000480353 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
CDK9-203ENST00000480353 NLRP10Q86W26 655 aa19.79■□□□□ 0.76
CDK9-203ENST00000480353 SALL2Q9Y467 1007 aaPredicted RBP19.79■□□□□ 0.76
CDK9-203ENST00000480353 SH3TC1Q8TE82 1336 aa19.78■□□□□ 0.76
CDK9-203ENST00000480353 TCERG1O14776 1098 aaKnown RBP19.78■□□□□ 0.76
CDK9-203ENST00000480353 VEGFAP15692 232 aaPredicted RBP19.78■□□□□ 0.76
CDK9-203ENST00000480353 CC2D2BQ6DHV5 1058 aa19.78■□□□□ 0.76
CDK9-203ENST00000480353 FAM9BQ8IZU0 186 aa19.78■□□□□ 0.76
CDK9-203ENST00000480353 C7orf43Q8WVR3 580 aa19.78■□□□□ 0.76
CDK9-203ENST00000480353 PPEF1O14829 653 aaPredicted RBP19.77■□□□□ 0.76
CDK9-203ENST00000480353 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
CDK9-203ENST00000480353 WWC1Q8IX03 1113 aa19.77■□□□□ 0.76
CDK9-203ENST00000480353 RBM46Q8TBY0 533 aaKnown RBP19.77■□□□□ 0.76
CDK9-203ENST00000480353 CRAMP1Q96RY5 1269 aa19.77■□□□□ 0.76
CDK9-203ENST00000480353 STK31Q9BXU1 1019 aa19.77■□□□□ 0.76
CDK9-203ENST00000480353 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
CDK9-203ENST00000480353 HOXA10P31260 410 aaPredicted RBP19.76■□□□□ 0.75
CDK9-203ENST00000480353 GRIPAP1Q4V328 841 aa19.76■□□□□ 0.75
CDK9-203ENST00000480353 SLC10A5Q5PT55 438 aa19.76■□□□□ 0.75
CDK9-203ENST00000480353 OLFM4Q6UX06 510 aa19.76■□□□□ 0.75
CDK9-203ENST00000480353 C8orf58Q8NAV2 365 aa19.76■□□□□ 0.75
CDK9-203ENST00000480353 TSR2Q969E8 191 aaKnown RBP19.76■□□□□ 0.75
CDK9-203ENST00000480353 ZNF428Q96B54 188 aa19.76■□□□□ 0.75
CDK9-203ENST00000480353 ZNF277Q9NRM2 450 aaPredicted RBP19.76■□□□□ 0.75
CDK9-203ENST00000480353 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
CDK9-203ENST00000480353 DDX46Q7L014 1031 aaKnown RBP19.75■□□□□ 0.75
CDK9-203ENST00000480353 SYNE4Q8N205 404 aa19.75■□□□□ 0.75
CDK9-203ENST00000480353 LAMB2P55268 1798 aa19.75■□□□□ 0.75
CDK9-203ENST00000480353 IARSP41252 1262 aaKnown RBP19.74■□□□□ 0.75
CDK9-203ENST00000480353 JDP2Q8WYK2 163 aa19.74■□□□□ 0.75
CDK9-203ENST00000480353 PHAXQ9H814 394 aaKnown RBP19.74■□□□□ 0.75
CDK9-203ENST00000480353 FSTL1Q12841 308 aa19.73■□□□□ 0.75
CDK9-203ENST00000480353 C3orf67Q6ZVT6 689 aa19.73■□□□□ 0.75
CDK9-203ENST00000480353 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
CDK9-203ENST00000480353 IL16Q14005 1332 aa19.73■□□□□ 0.75
CDK9-203ENST00000480353 HSP90B1P14625 803 aaKnown RBP19.72■□□□□ 0.75
CDK9-203ENST00000480353 APLP1P51693 650 aa19.72■□□□□ 0.75
CDK9-203ENST00000480353 TWISTNBQ3B726 338 aaPredicted RBP19.72■□□□□ 0.75
CDK9-203ENST00000480353 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
CDK9-203ENST00000480353 RTL5Q5HYW3 569 aaPredicted RBP19.72■□□□□ 0.75
CDK9-203ENST00000480353 PSMD1Q99460 953 aa19.72■□□□□ 0.75
CDK9-203ENST00000480353 MYD88Q99836 296 aa19.72■□□□□ 0.75
CDK9-203ENST00000480353 WDR90Q96KV7 1748 aa19.71■□□□□ 0.75
CDK9-203ENST00000480353 TSPYL6Q8N831 410 aa19.71■□□□□ 0.75
CDK9-203ENST00000480353 FAM89AQ96GI7 184 aa19.71■□□□□ 0.75
CDK9-203ENST00000480353 ISCA1Q9BUE6 129 aa19.71■□□□□ 0.75
CDK9-203ENST00000480353 ABCC4O15439 1325 aa19.71■□□□□ 0.75
CDK9-203ENST00000480353 BBOX1O75936 387 aa19.7■□□□□ 0.74
CDK9-203ENST00000480353 DDNO94850 711 aaPredicted RBP19.7■□□□□ 0.74
CDK9-203ENST00000480353 WDR63Q8IWG1 891 aa19.7■□□□□ 0.74
CDK9-203ENST00000480353 LARGE2Q8N3Y3 721 aa19.7■□□□□ 0.74
CDK9-203ENST00000480353 DDX60Q8IY21 1712 aaKnown RBP19.69■□□□□ 0.74
CDK9-203ENST00000480353 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
CDK9-203ENST00000480353 SUPT20HQ8NEM7 779 aa19.69■□□□□ 0.74
CDK9-203ENST00000480353 ATP6V0A2Q9Y487 856 aa19.69■□□□□ 0.74
CDK9-203ENST00000480353 EIF6P56537 245 aaKnown RBP19.68■□□□□ 0.74
CDK9-203ENST00000480353 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
CDK9-203ENST00000480353 GRAPQ13588 217 aa19.68■□□□□ 0.74
CDK9-203ENST00000480353 GRAPLQ8TC17 118 aaPredicted RBP19.68■□□□□ 0.74
CDK9-203ENST00000480353 IRS4O14654 1257 aaPredicted RBP19.67■□□□□ 0.74
CDK9-203ENST00000480353 TRIM28Q13263 835 aaKnown RBP19.67■□□□□ 0.74
CDK9-203ENST00000480353 DPP8Q6V1X1 898 aaPredicted RBP19.67■□□□□ 0.74
CDK9-203ENST00000480353 NIM1KQ8IY84 436 aa19.67■□□□□ 0.74
CDK9-203ENST00000480353 CWC25Q9NXE8 425 aaPredicted RBP19.67■□□□□ 0.74
CDK9-203ENST00000480353 MAP3K2Q9Y2U5 619 aa19.67■□□□□ 0.74
CDK9-203ENST00000480353 FANCIQ9NVI1 1328 aa19.67■□□□□ 0.74
CDK9-203ENST00000480353 PPIP5K2O43314 1243 aa19.66■□□□□ 0.74
CDK9-203ENST00000480353 SLC4A2P04920 1241 aa19.66■□□□□ 0.74
CDK9-203ENST00000480353 TMC4Q7Z404 712 aa19.66■□□□□ 0.74
CDK9-203ENST00000480353 SP8Q8IXZ3 490 aa19.66■□□□□ 0.74
CDK9-203ENST00000480353 ZBTB38Q8NAP3 1195 aaPredicted RBP19.66■□□□□ 0.74
CDK9-203ENST00000480353 CCDC191Q8NCU4 936 aa19.66■□□□□ 0.74
CDK9-203ENST00000480353 METTL22Q9BUU2 404 aaPredicted RBP19.66■□□□□ 0.74
CDK9-203ENST00000480353 MYH16Q9H6N6 1097 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms