RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
CYTH3-206ENST00000478541 ZNF526Q8TF50 670 aaPredicted RBP20.72■□□□□ 0.91
CYTH3-206ENST00000478541 LTBP3Q9NS15 1303 aa20.72■□□□□ 0.91
CYTH3-206ENST00000478541 ELL2O00472 640 aaPredicted RBP20.71■□□□□ 0.91
CYTH3-206ENST00000478541 PRELPP51888 382 aa20.71■□□□□ 0.91
CYTH3-206ENST00000478541 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
CYTH3-206ENST00000478541 C7orf43Q8WVR3 580 aa20.71■□□□□ 0.91
CYTH3-206ENST00000478541 UTP14AQ9BVJ6 771 aaKnown RBP20.71■□□□□ 0.91
CYTH3-206ENST00000478541 SLC10A5Q5PT55 438 aa20.7■□□□□ 0.9
CYTH3-206ENST00000478541 NLRP10Q86W26 655 aa20.7■□□□□ 0.9
CYTH3-206ENST00000478541 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
CYTH3-206ENST00000478541 SENP3-EIF4A1A0A087X0R7 540 aa20.69■□□□□ 0.9
CYTH3-206ENST00000478541 HOXA10P31260 410 aaPredicted RBP20.69■□□□□ 0.9
CYTH3-206ENST00000478541 WDR63Q8IWG1 891 aa20.69■□□□□ 0.9
CYTH3-206ENST00000478541 FAM9BQ8IZU0 186 aa20.69■□□□□ 0.9
CYTH3-206ENST00000478541 ZNF219Q9P2Y4 722 aaPredicted RBP20.69■□□□□ 0.9
CYTH3-206ENST00000478541 LAMB2P55268 1798 aa20.69■□□□□ 0.9
CYTH3-206ENST00000478541 CCDC30Q5VVM6 783 aa20.68■□□□□ 0.9
CYTH3-206ENST00000478541 TSPYL6Q8N831 410 aa20.67■□□□□ 0.9
CYTH3-206ENST00000478541 ISCA1Q9BUE6 129 aa20.67■□□□□ 0.9
CYTH3-206ENST00000478541 TAOK3Q9H2K8 898 aa20.67■□□□□ 0.9
CYTH3-206ENST00000478541 KIF3CO14782 793 aa20.66■□□□□ 0.9
CYTH3-206ENST00000478541 CCDC93Q567U6 631 aa20.66■□□□□ 0.9
CYTH3-206ENST00000478541 RPGRQ92834 1020 aaKnown RBP20.66■□□□□ 0.9
CYTH3-206ENST00000478541 NLRP3Q96P20 1036 aa20.66■□□□□ 0.9
CYTH3-206ENST00000478541 PHAXQ9H814 394 aaKnown RBP20.66■□□□□ 0.9
CYTH3-206ENST00000478541 DDX60Q8IY21 1712 aaKnown RBP20.65■□□□□ 0.9
CYTH3-206ENST00000478541 KDM2BQ8NHM5 1336 aa20.65■□□□□ 0.9
CYTH3-206ENST00000478541 TRIM28Q13263 835 aaKnown RBP20.65■□□□□ 0.9
CYTH3-206ENST00000478541 CRAMP1Q96RY5 1269 aa20.65■□□□□ 0.9
CYTH3-206ENST00000478541 TRMT112Q9UI30 125 aaKnown RBP20.65■□□□□ 0.9
CYTH3-206ENST00000478541 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
CYTH3-206ENST00000478541 SNED1Q8TER0 1413 aa20.64■□□□□ 0.89
CYTH3-206ENST00000478541 SH3TC1Q8TE82 1336 aa20.64■□□□□ 0.89
CYTH3-206ENST00000478541 FANCIQ9NVI1 1328 aa20.64■□□□□ 0.89
CYTH3-206ENST00000478541 GOLGA2Q08379 1002 aa20.64■□□□□ 0.89
CYTH3-206ENST00000478541 TWISTNBQ3B726 338 aaPredicted RBP20.64■□□□□ 0.89
CYTH3-206ENST00000478541 C3orf67Q6ZVT6 689 aa20.64■□□□□ 0.89
CYTH3-206ENST00000478541 RBM17Q96I25 401 aaKnown RBP20.64■□□□□ 0.89
CYTH3-206ENST00000478541 RIC3Q7Z5B4 369 aa20.63■□□□□ 0.89
CYTH3-206ENST00000478541 RTKN2Q8IZC4 609 aa20.63■□□□□ 0.89
CYTH3-206ENST00000478541 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
CYTH3-206ENST00000478541 FKBP4Q02790 459 aaKnown RBP eCLIP20.62■□□□□ 0.89
CYTH3-206ENST00000478541 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
CYTH3-206ENST00000478541 NMRK2Q9NPI5 230 aa20.62■□□□□ 0.89
CYTH3-206ENST00000478541 GLTPD2A6NH11 291 aa20.61■□□□□ 0.89
CYTH3-206ENST00000478541 ATP5J2-PTCD1G3V325 749 aa20.61■□□□□ 0.89
CYTH3-206ENST00000478541 DDX58O95786 925 aaKnown RBP20.61■□□□□ 0.89
CYTH3-206ENST00000478541 STK31Q9BXU1 1019 aa20.61■□□□□ 0.89
CYTH3-206ENST00000478541 GRIPAP1Q4V328 841 aa20.6■□□□□ 0.89
CYTH3-206ENST00000478541 OLFM4Q6UX06 510 aa20.6■□□□□ 0.89
CYTH3-206ENST00000478541 SYNE4Q8N205 404 aa20.6■□□□□ 0.89
CYTH3-206ENST00000478541 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
CYTH3-206ENST00000478541 PSMD1Q99460 953 aa20.59■□□□□ 0.89
CYTH3-206ENST00000478541 WDR90Q96KV7 1748 aa20.58■□□□□ 0.89
CYTH3-206ENST00000478541 ABCC4O15439 1325 aa20.58■□□□□ 0.89
CYTH3-206ENST00000478541 ZNF521Q96K83 1311 aa20.58■□□□□ 0.89
CYTH3-206ENST00000478541 PPEF1O14829 653 aaPredicted RBP20.58■□□□□ 0.89
CYTH3-206ENST00000478541 TOMM70O94826 608 aa20.58■□□□□ 0.89
CYTH3-206ENST00000478541 FAM89AQ96GI7 184 aa20.58■□□□□ 0.89
CYTH3-206ENST00000478541 METTL22Q9BUU2 404 aaPredicted RBP20.58■□□□□ 0.89
CYTH3-206ENST00000478541 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.89
CYTH3-206ENST00000478541 DPY19L2Q6NUT2 758 aa20.57■□□□□ 0.88
CYTH3-206ENST00000478541 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
CYTH3-206ENST00000478541 CCDC191Q8NCU4 936 aa20.57■□□□□ 0.88
CYTH3-206ENST00000478541 MYD88Q99836 296 aa20.57■□□□□ 0.88
CYTH3-206ENST00000478541 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
CYTH3-206ENST00000478541 VAMP4O75379 141 aa20.56■□□□□ 0.88
CYTH3-206ENST00000478541 SLC4A2P04920 1241 aa20.56■□□□□ 0.88
CYTH3-206ENST00000478541 EXOSC9Q06265 439 aaKnown RBP20.56■□□□□ 0.88
CYTH3-206ENST00000478541 RRAGCQ9HB90 399 aa20.56■□□□□ 0.88
CYTH3-206ENST00000478541 TAF1P21675 1872 aa20.56■□□□□ 0.88
CYTH3-206ENST00000478541 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
CYTH3-206ENST00000478541 BBOX1O75936 387 aa20.55■□□□□ 0.88
CYTH3-206ENST00000478541 SF3B3Q15393 1217 aaKnown RBP20.55■□□□□ 0.88
CYTH3-206ENST00000478541 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
CYTH3-206ENST00000478541 ZBTB38Q8NAP3 1195 aaPredicted RBP20.55■□□□□ 0.88
CYTH3-206ENST00000478541 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
CYTH3-206ENST00000478541 MAP3K2Q9Y2U5 619 aa20.55■□□□□ 0.88
CYTH3-206ENST00000478541 ATP6V0A2Q9Y487 856 aa20.55■□□□□ 0.88
CYTH3-206ENST00000478541 LRRC37AA6NMS7 1700 aa20.54■□□□□ 0.88
CYTH3-206ENST00000478541 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
CYTH3-206ENST00000478541 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
CYTH3-206ENST00000478541 IARSP41252 1262 aaKnown RBP20.54■□□□□ 0.88
CYTH3-206ENST00000478541 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
CYTH3-206ENST00000478541 IRS4O14654 1257 aaPredicted RBP20.53■□□□□ 0.88
CYTH3-206ENST00000478541 PCCAP05165 728 aaPredicted RBP20.53■□□□□ 0.88
CYTH3-206ENST00000478541 HSP90B1P14625 803 aaKnown RBP20.53■□□□□ 0.88
CYTH3-206ENST00000478541 VEGFAP15692 232 aaPredicted RBP20.53■□□□□ 0.88
CYTH3-206ENST00000478541 GRAPQ13588 217 aa20.53■□□□□ 0.88
CYTH3-206ENST00000478541 G2E3Q7L622 706 aa20.53■□□□□ 0.88
CYTH3-206ENST00000478541 C16orf71Q8IYS4 520 aaPredicted RBP20.53■□□□□ 0.88
CYTH3-206ENST00000478541 RBM46Q8TBY0 533 aaKnown RBP20.53■□□□□ 0.88
CYTH3-206ENST00000478541 GRAPLQ8TC17 118 aaPredicted RBP20.53■□□□□ 0.88
CYTH3-206ENST00000478541 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
CYTH3-206ENST00000478541 CWC25Q9NXE8 425 aaPredicted RBP20.53■□□□□ 0.88
CYTH3-206ENST00000478541 FLIIQ13045 1269 aa20.52■□□□□ 0.88
CYTH3-206ENST00000478541 TMC4Q7Z404 712 aa20.52■□□□□ 0.88
CYTH3-206ENST00000478541 SP8Q8IXZ3 490 aa20.52■□□□□ 0.88
CYTH3-206ENST00000478541 TMX4Q9H1E5 349 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms