RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 GTPBP6O43824 516 aaPredicted RBP5.64□□□□□ -1.51
POLR2B-208ENST00000478188 PHF14O94880 888 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 HMGB2P26583 209 aaKnown RBP5.64□□□□□ -1.51
POLR2B-208ENST00000478188 NBPF10Q6P3W6 841 aaKnown RBP5.64□□□□□ -1.51
POLR2B-208ENST00000478188 NBPF15Q8N660 670 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 DNAJC5GQ8N7S2 189 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 THUMPD2Q9BTF0 503 aaKnown RBP5.64□□□□□ -1.51
POLR2B-208ENST00000478188 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 ADAMTS8Q9UP79 889 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 COL4A1P02462 1669 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 SNED1Q8TER0 1413 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 POLRMTO00411 1230 aaKnown RBP5.63□□□□□ -1.51
POLR2B-208ENST00000478188 ZNF853P0CG23 659 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 RGS19P49795 217 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 EIF4A1P60842 406 aaKnown RBP5.63□□□□□ -1.51
POLR2B-208ENST00000478188 SPRYD3Q8NCJ5 442 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 RTCBQ9Y3I0 505 aaKnown RBP5.63□□□□□ -1.51
POLR2B-208ENST00000478188 BTBD11A6QL63 1104 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 CAMTA2O94983 1202 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 YBX3P16989 372 aaKnown RBP eCLIP5.63□□□□□ -1.513e-6■■□□□ 12.7
POLR2B-208ENST00000478188 KCNA3P22001 575 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 VARS2Q5ST30 1063 aaKnown RBP5.63□□□□□ -1.51
POLR2B-208ENST00000478188 PAXIP1Q6ZW49 1069 aaPredicted RBP5.63□□□□□ -1.51
POLR2B-208ENST00000478188 RYDENQ9NUL5 291 aaKnown RBP5.63□□□□□ -1.51
POLR2B-208ENST00000478188 CD2APQ9Y5K6 639 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 LTBP1Q14766 1721 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 RIC1Q4ADV7 1423 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 PDIA6Q15084 440 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 TAF7Q15545 349 aaPredicted RBP5.63□□□□□ -1.51
POLR2B-208ENST00000478188 PNISRQ8TF01 805 aaKnown RBP5.63□□□□□ -1.51
POLR2B-208ENST00000478188 RUNDC1Q96C34 613 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 FMNL2Q96PY5 1086 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 BABAM1Q9NWV8 329 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 NARFQ9UHQ1 456 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 USP16Q9Y5T5 823 aa5.63□□□□□ -1.51
POLR2B-208ENST00000478188 CCDC88AQ3V6T2 1871 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 ATP10DQ9P241 1426 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 CACNA1FO60840 1977 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 ZNF646O15015 1829 aaPredicted RBP5.62□□□□□ -1.51
POLR2B-208ENST00000478188 SLX4Q8IY92 1834 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 TEFQ10587 303 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 TRAPPC3LQ5T215 181 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 CFAP44Q96MT7 982 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 A0A1B0GUL6 1792 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 IL6STP40189 918 aaPredicted RBP5.62□□□□□ -1.51
POLR2B-208ENST00000478188 CCDC146Q8IYE0 955 aa5.62□□□□□ -1.51
POLR2B-208ENST00000478188 CHL1O00533 1208 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 A1BGP04217 495 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 MMP10P09238 476 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 GPR153Q6NV75 609 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 MIS18AQ9NYP9 233 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 POLD1P28340 1107 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 PLCB2Q00722 1185 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 USPL1Q5W0Q7 1092 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 SNRPA1P09661 255 aaKnown RBP5.61□□□□□ -1.51
POLR2B-208ENST00000478188 NFIXQ14938 502 aa5.61□□□□□ -1.51
POLR2B-208ENST00000478188 TEX13AQ9BXU3 409 aaPredicted RBP5.61□□□□□ -1.51
POLR2B-208ENST00000478188 IBTKQ9P2D0 1353 aaPredicted RBP5.61□□□□□ -1.51
POLR2B-208ENST00000478188 ZNF521Q96K83 1311 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 RIPK4P57078 832 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 CCDC27Q2M243 656 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 ZNF687Q8N1G0 1237 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 NLGN1Q8N2Q7 840 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 PPP1R1BQ9UD71 204 aaPredicted RBP5.6□□□□□ -1.51
POLR2B-208ENST00000478188 RRP7AQ9Y3A4 280 aaKnown RBP5.6□□□□□ -1.51
POLR2B-208ENST00000478188 ERBB4Q15303 1308 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 ARSIQ5FYB1 569 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 TBC1D9BQ66K14 1250 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 TTC5Q8N0Z6 440 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 TMC2Q8TDI7 906 aa5.6□□□□□ -1.51
POLR2B-208ENST00000478188 PNNQ9H307 717 aaKnown RBP5.6□□□□□ -1.51
POLR2B-208ENST00000478188 TAF1P21675 1872 aa5.59□□□□□ -1.51
POLR2B-208ENST00000478188 MAPK8IP3Q9UPT6 1336 aa5.59□□□□□ -1.51
POLR2B-208ENST00000478188 STARD3NLO95772 234 aa5.59□□□□□ -1.51
POLR2B-208ENST00000478188 RFC4P35249 363 aa5.59□□□□□ -1.51
POLR2B-208ENST00000478188 PIP4K2AP48426 406 aaPredicted RBP5.59□□□□□ -1.51
POLR2B-208ENST00000478188 KRT24Q2M2I5 525 aa5.59□□□□□ -1.51
POLR2B-208ENST00000478188 RTF1Q92541 710 aaKnown RBP5.59□□□□□ -1.51
POLR2B-208ENST00000478188 PROSER3Q2NL68 480 aa5.59□□□□□ -1.51
POLR2B-208ENST00000478188 MYH3P11055 1940 aa5.59□□□□□ -1.51
POLR2B-208ENST00000478188 ABCC12Q96J65 1359 aa5.59□□□□□ -1.52
POLR2B-208ENST00000478188 DUOX1Q9NRD9 1551 aa5.59□□□□□ -1.52
POLR2B-208ENST00000478188 KLRG2A4D1S0 409 aaPredicted RBP5.59□□□□□ -1.52
POLR2B-208ENST00000478188 PPP1R37O75864 691 aa5.59□□□□□ -1.52
POLR2B-208ENST00000478188 CANXP27824 592 aaKnown RBP5.59□□□□□ -1.52
POLR2B-208ENST00000478188 TGFB2P61812 414 aa5.59□□□□□ -1.52
POLR2B-208ENST00000478188 TNS4Q8IZW8 715 aa5.59□□□□□ -1.52
POLR2B-208ENST00000478188 UBN2Q6ZU65 1347 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 A0A087WZG4 1122 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 C2orf72A6NCS6 295 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 APAF1O14727 1248 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 MBIPQ9NS73 344 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 COL4A5P29400 1685 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 ADAMTSL1Q8N6G6 1762 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 DPEP1P16444 411 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 LMOD3Q0VAK6 560 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 HLFQ16534 295 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 PRR5LQ6MZQ0 368 aa5.58□□□□□ -1.52
POLR2B-208ENST00000478188 TTLL7Q6ZT98 887 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms