RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 A1BGP04217 495 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 PPP2R1AP30153 589 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 IL6STP40189 918 aaPredicted RBP7.41□□□□□ -1.22
TRA2B-211ENST00000477939 SLC20A2Q08357 652 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 CFAP53Q96M91 514 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 FMNL2Q96PY5 1086 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 TBC1D2BQ9UPU7 963 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 KDM2BQ8NHM5 1336 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 ZC3H4Q9UPT8 1303 aaKnown RBP7.41□□□□□ -1.22
TRA2B-211ENST00000477939 SLX4Q8IY92 1834 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 A0A087WZG4 1122 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 PRAMEF22A3QJZ6 481 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 BTBD11A6QL63 1104 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 CAMTA2O94983 1202 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 U2AF1L5P0DN76 240 aaPredicted RBP7.4□□□□□ -1.22
TRA2B-211ENST00000477939 PIP4K2AP48426 406 aaPredicted RBP7.4□□□□□ -1.22
TRA2B-211ENST00000477939 APLP1P51693 650 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 U2AF1Q01081 240 aaKnown RBP eCLIP7.4□□□□□ -1.22
TRA2B-211ENST00000477939 PRR5LQ6MZQ0 368 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 MCM10Q7L590 875 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 C2CD5Q86YS7 1000 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 CCDC24Q8N4L8 307 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 TTLL6Q8N841 843 aa7.4□□□□□ -1.22
TRA2B-211ENST00000477939 RBM46Q8TBY0 533 aaKnown RBP7.4□□□□□ -1.22
TRA2B-211ENST00000477939 TEX13AQ9BXU3 409 aaPredicted RBP7.4□□□□□ -1.22
TRA2B-211ENST00000477939 H0YIN7 160 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 TCERG1O14776 1098 aaKnown RBP7.39□□□□□ -1.23
TRA2B-211ENST00000477939 NRDCO43847 1150 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 LMNB1P20700 586 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 RGS3P49796 1198 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 HTRA3P83110 453 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 DCTN1Q14203 1278 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 DNAJC5GQ8N7S2 189 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 NUDCQ9Y266 331 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 USP16Q9Y5T5 823 aa7.39□□□□□ -1.23
TRA2B-211ENST00000477939 FSTL1Q12841 308 aa7.38□□□□□ -1.23
TRA2B-211ENST00000477939 RALBP1Q15311 655 aa7.38□□□□□ -1.23
TRA2B-211ENST00000477939 HSP90AB3PQ58FF7 597 aa7.38□□□□□ -1.23
TRA2B-211ENST00000477939 IFFO2Q5TF58 517 aa7.38□□□□□ -1.23
TRA2B-211ENST00000477939 DZIP3Q86Y13 1208 aaKnown RBP7.38□□□□□ -1.23
TRA2B-211ENST00000477939 C16orf71Q8IYS4 520 aaPredicted RBP7.38□□□□□ -1.23
TRA2B-211ENST00000477939 CNBD1Q8NA66 436 aa7.38□□□□□ -1.23
TRA2B-211ENST00000477939 BRIP1Q9BX63 1249 aa7.38□□□□□ -1.23
TRA2B-211ENST00000477939 GLTPD2A6NH11 291 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 NBPF26B4DH59 902 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 C21orf2O43822 256 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 SNRPA1P09661 255 aaKnown RBP7.37□□□□□ -1.23
TRA2B-211ENST00000477939 SRGNP10124 158 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 CALRP27797 417 aaKnown RBP7.37□□□□□ -1.23
TRA2B-211ENST00000477939 PDE6BP35913 854 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 SSR1P43307 286 aaKnown RBP7.37□□□□□ -1.23
TRA2B-211ENST00000477939 PRPF40BQ6NWY9 871 aaKnown RBP7.37□□□□□ -1.23
TRA2B-211ENST00000477939 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
TRA2B-211ENST00000477939 EXOC8Q8IYI6 725 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 RTF1Q92541 710 aaKnown RBP7.37□□□□□ -1.23
TRA2B-211ENST00000477939 SETDB2Q96T68 719 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 PNNQ9H307 717 aaKnown RBP7.37□□□□□ -1.23
TRA2B-211ENST00000477939 TMEM51Q9NW97 253 aa7.37□□□□□ -1.23
TRA2B-211ENST00000477939 NUP98P52948 1817 aa7.36□□□□□ -1.23
TRA2B-211ENST00000477939 LTBP3Q9NS15 1303 aa7.36□□□□□ -1.23
TRA2B-211ENST00000477939 HTATSF1O43719 755 aaKnown RBP7.36□□□□□ -1.23
TRA2B-211ENST00000477939 ST5P78524 1137 aa7.36□□□□□ -1.23
TRA2B-211ENST00000477939 FAM177A1Q8N128 213 aaPredicted RBP7.36□□□□□ -1.23
TRA2B-211ENST00000477939 SMC1BQ8NDV3 1235 aa7.36□□□□□ -1.23
TRA2B-211ENST00000477939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.36□□□□□ -1.23
TRA2B-211ENST00000477939 MIS18AQ9NYP9 233 aa7.36□□□□□ -1.23
TRA2B-211ENST00000477939 ZNF219Q9P2Y4 722 aaPredicted RBP7.36□□□□□ -1.23
TRA2B-211ENST00000477939 PDZRN3Q9UPQ7 1066 aa7.36□□□□□ -1.23
TRA2B-211ENST00000477939 ABCC12Q96J65 1359 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 POTECB2RU33 542 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 NPHP1O15259 732 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 VEGFAP15692 232 aaPredicted RBP7.35□□□□□ -1.23
TRA2B-211ENST00000477939 GSE1Q14687 1217 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 NBPF9Q3BBW0 867 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 ERFEQ4G0M1 354 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 DNTTIP2Q5QJE6 756 aaKnown RBP7.35□□□□□ -1.23
TRA2B-211ENST00000477939 STYK1Q6J9G0 422 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 CLEC4GQ6UXB4 293 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 NBPF5PQ86XG9 351 aaPredicted RBP7.35□□□□□ -1.23
TRA2B-211ENST00000477939 KLRG1Q96E93 195 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 ZNF830Q96NB3 372 aaPredicted RBP7.35□□□□□ -1.23
TRA2B-211ENST00000477939 PLEKHF1Q96S99 279 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 TAOK3Q9H2K8 898 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 RBM28Q9NW13 759 aaKnown RBP7.35□□□□□ -1.23
TRA2B-211ENST00000477939 GEMIN8Q9NWZ8 242 aaKnown RBP7.35□□□□□ -1.23
TRA2B-211ENST00000477939 ZNF652Q9Y2D9 606 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 SNED1Q8TER0 1413 aa7.35□□□□□ -1.23
TRA2B-211ENST00000477939 KLRG2A4D1S0 409 aaPredicted RBP7.34□□□□□ -1.23
TRA2B-211ENST00000477939 RGL2O15211 777 aa7.34□□□□□ -1.23
TRA2B-211ENST00000477939 RAD21O60216 631 aa7.34□□□□□ -1.23
TRA2B-211ENST00000477939 PSEN1P49768 467 aa7.34□□□□□ -1.23
TRA2B-211ENST00000477939 TAF7Q15545 349 aaPredicted RBP7.34□□□□□ -1.23
TRA2B-211ENST00000477939 HLFQ16534 295 aa7.34□□□□□ -1.23
TRA2B-211ENST00000477939 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
TRA2B-211ENST00000477939 C7orf43Q8WVR3 580 aa7.34□□□□□ -1.23
TRA2B-211ENST00000477939 CNKSR1Q969H4 720 aa7.34□□□□□ -1.23
TRA2B-211ENST00000477939 MASTLQ96GX5 879 aa7.34□□□□□ -1.23
TRA2B-211ENST00000477939 THUMPD2Q9BTF0 503 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms