RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 STYK1Q6J9G0 422 aa22.82■■□□□ 1.24
PTPN7-209ENST00000477554 ANKRD13DQ6ZTN6 518 aa22.82■■□□□ 1.24
PTPN7-209ENST00000477554 G2E3Q7L622 706 aa22.82■■□□□ 1.24
PTPN7-209ENST00000477554 FER1L6Q2WGJ9 1857 aa22.82■■□□□ 1.24
PTPN7-209ENST00000477554 TWISTNBQ3B726 338 aaPredicted RBP22.82■■□□□ 1.24
PTPN7-209ENST00000477554 PLBD2Q8NHP8 589 aa22.82■■□□□ 1.24
PTPN7-209ENST00000477554 ZNF521Q96K83 1311 aa22.82■■□□□ 1.24
PTPN7-209ENST00000477554 HYPKQ9NX55 129 aa22.82■■□□□ 1.24
PTPN7-209ENST00000477554 IBTKQ9P2D0 1353 aaPredicted RBP22.81■■□□□ 1.24
PTPN7-209ENST00000477554 EXOSC9Q06265 439 aaKnown RBP22.81■■□□□ 1.24
PTPN7-209ENST00000477554 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
PTPN7-209ENST00000477554 NYXQ9GZU5 481 aa22.81■■□□□ 1.24
PTPN7-209ENST00000477554 CRY2Q49AN0 593 aa22.8■■□□□ 1.24
PTPN7-209ENST00000477554 C7orf43Q8WVR3 580 aa22.8■■□□□ 1.24
PTPN7-209ENST00000477554 UTP14AQ9BVJ6 771 aaKnown RBP22.8■■□□□ 1.24
PTPN7-209ENST00000477554 COL4A1P02462 1669 aa22.8■■□□□ 1.24
PTPN7-209ENST00000477554 TAF1P21675 1872 aa22.79■■□□□ 1.24
PTPN7-209ENST00000477554 DDX60Q8IY21 1712 aaKnown RBP22.79■■□□□ 1.24
PTPN7-209ENST00000477554 HCLS1P14317 486 aaPredicted RBP22.79■■□□□ 1.24
PTPN7-209ENST00000477554 NPR1P16066 1061 aa22.79■■□□□ 1.24
PTPN7-209ENST00000477554 ISCA1Q9BUE6 129 aa22.79■■□□□ 1.24
PTPN7-209ENST00000477554 RNF181Q9P0P0 153 aa22.79■■□□□ 1.24
PTPN7-209ENST00000477554 PARP10Q53GL7 1025 aa22.78■■□□□ 1.24
PTPN7-209ENST00000477554 RTL5Q5HYW3 569 aaPredicted RBP22.78■■□□□ 1.24
PTPN7-209ENST00000477554 CNKSR1Q969H4 720 aa22.78■■□□□ 1.24
PTPN7-209ENST00000477554 CCDC30Q5VVM6 783 aa22.77■■□□□ 1.24
PTPN7-209ENST00000477554 PPP1R42Q7Z4L9 355 aa22.77■■□□□ 1.24
PTPN7-209ENST00000477554 PDZRN3Q9UPQ7 1066 aa22.77■■□□□ 1.24
PTPN7-209ENST00000477554 VAMP4O75379 141 aa22.76■■□□□ 1.23
PTPN7-209ENST00000477554 JARID2Q92833 1246 aaPredicted RBP22.76■■□□□ 1.23
PTPN7-209ENST00000477554 TRMT112Q9UI30 125 aaKnown RBP22.76■■□□□ 1.23
PTPN7-209ENST00000477554 RIC1Q4ADV7 1423 aa22.76■■□□□ 1.23
PTPN7-209ENST00000477554 FAM89AQ96GI7 184 aa22.75■■□□□ 1.23
PTPN7-209ENST00000477554 MYD88Q99836 296 aa22.75■■□□□ 1.23
PTPN7-209ENST00000477554 TIAM2Q8IVF5 1701 aa22.75■■□□□ 1.23
PTPN7-209ENST00000477554 HSP90AB3PQ58FF7 597 aa22.74■■□□□ 1.23
PTPN7-209ENST00000477554 RIC3Q7Z5B4 369 aa22.74■■□□□ 1.23
PTPN7-209ENST00000477554 SNED1Q8TER0 1413 aa22.74■■□□□ 1.23
PTPN7-209ENST00000477554 SLC10A5Q5PT55 438 aa22.74■■□□□ 1.23
PTPN7-209ENST00000477554 SLC4A2P04920 1241 aa22.73■■□□□ 1.23
PTPN7-209ENST00000477554 HOXA10P31260 410 aaPredicted RBP22.72■■□□□ 1.23
PTPN7-209ENST00000477554 GOLGA2Q08379 1002 aa22.72■■□□□ 1.23
PTPN7-209ENST00000477554 CDCA7LQ96GN5 454 aa22.72■■□□□ 1.23
PTPN7-209ENST00000477554 GPBP1L1Q9HC44 474 aaPredicted RBP22.72■■□□□ 1.23
PTPN7-209ENST00000477554 NMRK2Q9NPI5 230 aa22.72■■□□□ 1.23
PTPN7-209ENST00000477554 MAP3K2Q9Y2U5 619 aa22.72■■□□□ 1.23
PTPN7-209ENST00000477554 SH3TC1Q8TE82 1336 aa22.71■■□□□ 1.23
PTPN7-209ENST00000477554 PI4KAP2A4QPH2 592 aa22.71■■□□□ 1.23
PTPN7-209ENST00000477554 LMNB1P20700 586 aa22.71■■□□□ 1.23
PTPN7-209ENST00000477554 PI4KAP1Q8N8J0 262 aa22.71■■□□□ 1.23
PTPN7-209ENST00000477554 RPGRQ92834 1020 aaKnown RBP22.71■■□□□ 1.23
PTPN7-209ENST00000477554 IGKV5-2P06315 115 aa22.7■■□□□ 1.22
PTPN7-209ENST00000477554 ABCC4O15439 1325 aa22.7■■□□□ 1.22
PTPN7-209ENST00000477554 DICER1Q9UPY3 1922 aaKnown RBP22.69■■□□□ 1.22
PTPN7-209ENST00000477554 KIF3CO14782 793 aa22.69■■□□□ 1.22
PTPN7-209ENST00000477554 NLRP3Q96P20 1036 aa22.69■■□□□ 1.22
PTPN7-209ENST00000477554 METTL22Q9BUU2 404 aaPredicted RBP22.69■■□□□ 1.22
PTPN7-209ENST00000477554 COL4A5P29400 1685 aa22.69■■□□□ 1.22
PTPN7-209ENST00000477554 STK31Q9BXU1 1019 aa22.68■■□□□ 1.22
PTPN7-209ENST00000477554 TAOK3Q9H2K8 898 aa22.68■■□□□ 1.22
PTPN7-209ENST00000477554 ZNF277Q9NRM2 450 aaPredicted RBP22.68■■□□□ 1.22
PTPN7-209ENST00000477554 TRIM28Q13263 835 aaKnown RBP22.67■■□□□ 1.22
PTPN7-209ENST00000477554 CWF19L2Q2TBE0 894 aaKnown RBP22.67■■□□□ 1.22
PTPN7-209ENST00000477554 KSR2Q6VAB6 950 aa22.67■■□□□ 1.22
PTPN7-209ENST00000477554 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
PTPN7-209ENST00000477554 FLIIQ13045 1269 aa22.66■■□□□ 1.22
PTPN7-209ENST00000477554 CCDC93Q567U6 631 aa22.66■■□□□ 1.22
PTPN7-209ENST00000477554 RBM17Q96I25 401 aaKnown RBP22.66■■□□□ 1.22
PTPN7-209ENST00000477554 CRAMP1Q96RY5 1269 aa22.65■■□□□ 1.22
PTPN7-209ENST00000477554 MYH16Q9H6N6 1097 aa22.65■■□□□ 1.22
PTPN7-209ENST00000477554 LTBP3Q9NS15 1303 aa22.65■■□□□ 1.22
PTPN7-209ENST00000477554 IRS4O14654 1257 aaPredicted RBP22.65■■□□□ 1.22
PTPN7-209ENST00000477554 PPEF1O14829 653 aaPredicted RBP22.65■■□□□ 1.22
PTPN7-209ENST00000477554 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.22
PTPN7-209ENST00000477554 F6X3S4 739 aa22.64■■□□□ 1.21
PTPN7-209ENST00000477554 C1QTNF8P60827 252 aa22.64■■□□□ 1.21
PTPN7-209ENST00000477554 SLFN5Q08AF3 891 aa22.64■■□□□ 1.21
PTPN7-209ENST00000477554 DDX58O95786 925 aaKnown RBP22.63■■□□□ 1.21
PTPN7-209ENST00000477554 FKBP4Q02790 459 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTPN7-209ENST00000477554 ZBTB38Q8NAP3 1195 aaPredicted RBP22.63■■□□□ 1.21
PTPN7-209ENST00000477554 CELF1Q92879 486 aaKnown RBP22.62■■□□□ 1.21
PTPN7-209ENST00000477554 CCDC85AQ96PX6 553 aaPredicted RBP22.62■■□□□ 1.21
PTPN7-209ENST00000477554 CWC25Q9NXE8 425 aaPredicted RBP22.62■■□□□ 1.21
PTPN7-209ENST00000477554 CACNA1FO60840 1977 aa22.61■■□□□ 1.21
PTPN7-209ENST00000477554 NEURL1BA8MQ27 555 aa22.61■■□□□ 1.21
PTPN7-209ENST00000477554 FKBP5Q13451 457 aaPredicted RBP22.61■■□□□ 1.21
PTPN7-209ENST00000477554 CCDC191Q8NCU4 936 aa22.61■■□□□ 1.21
PTPN7-209ENST00000477554 RRAGCQ9HB90 399 aa22.61■■□□□ 1.21
PTPN7-209ENST00000477554 SOGA3Q5TF21 947 aa22.6■■□□□ 1.21
PTPN7-209ENST00000477554 SEC31BQ9NQW1 1179 aa22.6■■□□□ 1.21
PTPN7-209ENST00000477554 POTECB2RU33 542 aa22.59■■□□□ 1.21
PTPN7-209ENST00000477554 PCCAP05165 728 aaPredicted RBP22.59■■□□□ 1.21
PTPN7-209ENST00000477554 SF3B3Q15393 1217 aaKnown RBP22.59■■□□□ 1.21
PTPN7-209ENST00000477554 ZNF541Q9H0D2 1346 aa22.59■■□□□ 1.21
PTPN7-209ENST00000477554 DUOX1Q9NRD9 1551 aa22.58■■□□□ 1.21
PTPN7-209ENST00000477554 GLTPD2A6NH11 291 aa22.58■■□□□ 1.21
PTPN7-209ENST00000477554 GRAPQ13588 217 aa22.58■■□□□ 1.21
PTPN7-209ENST00000477554 DDX46Q7L014 1031 aaKnown RBP22.58■■□□□ 1.21
PTPN7-209ENST00000477554 RTKN2Q8IZC4 609 aa22.58■■□□□ 1.21
PTPN7-209ENST00000477554 GRAPLQ8TC17 118 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms