RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
PGK1-204ENST00000477335 ZNF34Q8IZ26 560 aa11.74□□□□□ -0.53
PGK1-204ENST00000477335 PDGFDQ9GZP0 370 aaPredicted RBP11.74□□□□□ -0.53
PGK1-204ENST00000477335 C1orf115Q9H7X2 142 aa11.74□□□□□ -0.53
PGK1-204ENST00000477335 ZBTB40Q9NUA8 1239 aa11.74□□□□□ -0.53
PGK1-204ENST00000477335 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
PGK1-204ENST00000477335 DDX19BQ9UMR2 479 aa11.74□□□□□ -0.53
PGK1-204ENST00000477335 UTYO14607 1347 aa11.73□□□□□ -0.53
PGK1-204ENST00000477335 NBPF7P0C2Y1 421 aaPredicted RBP11.73□□□□□ -0.53
PGK1-204ENST00000477335 GYS1P13807 737 aa11.73□□□□□ -0.53
PGK1-204ENST00000477335 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
PGK1-204ENST00000477335 CASP7P55210 303 aa11.73□□□□□ -0.53
PGK1-204ENST00000477335 GCKRQ14397 625 aa11.73□□□□□ -0.53
PGK1-204ENST00000477335 TBC1D9BQ66K14 1250 aa11.73□□□□□ -0.53
PGK1-204ENST00000477335 NLRP10Q86W26 655 aa11.73□□□□□ -0.53
PGK1-204ENST00000477335 SYNE4Q8N205 404 aa11.73□□□□□ -0.53
PGK1-204ENST00000477335 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
PGK1-204ENST00000477335 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
PGK1-204ENST00000477335 QSER1Q2KHR3 1735 aa11.72□□□□□ -0.53
PGK1-204ENST00000477335 RFC4P35249 363 aa11.72□□□□□ -0.53
PGK1-204ENST00000477335 TRIM28Q13263 835 aaKnown RBP11.72□□□□□ -0.53
PGK1-204ENST00000477335 SUSD4Q5VX71 490 aa11.72□□□□□ -0.53
PGK1-204ENST00000477335 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
PGK1-204ENST00000477335 STK32BQ9NY57 414 aa11.72□□□□□ -0.53
PGK1-204ENST00000477335 COL24A1Q17RW2 1714 aa11.72□□□□□ -0.53
PGK1-204ENST00000477335 H7C1W4 665 aa11.71□□□□□ -0.53
PGK1-204ENST00000477335 GRM8O00222 908 aa11.71□□□□□ -0.53
PGK1-204ENST00000477335 RGL2O15211 777 aa11.71□□□□□ -0.53
PGK1-204ENST00000477335 NEXNQ0ZGT2 675 aa11.71□□□□□ -0.53
PGK1-204ENST00000477335 EPHA10Q5JZY3 1008 aa11.71□□□□□ -0.53
PGK1-204ENST00000477335 BICDL1Q6ZP65 573 aa11.71□□□□□ -0.53
PGK1-204ENST00000477335 CCDC191Q8NCU4 936 aa11.71□□□□□ -0.53
PGK1-204ENST00000477335 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
PGK1-204ENST00000477335 CWC25Q9NXE8 425 aaPredicted RBP11.71□□□□□ -0.53
PGK1-204ENST00000477335 ZPR1O75312 459 aa11.7□□□□□ -0.54
PGK1-204ENST00000477335 NTSR2O95665 410 aa11.7□□□□□ -0.54
PGK1-204ENST00000477335 NFIXQ14938 502 aa11.7□□□□□ -0.54
PGK1-204ENST00000477335 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
PGK1-204ENST00000477335 RTL5Q5HYW3 569 aaPredicted RBP11.7□□□□□ -0.54
PGK1-204ENST00000477335 CLEC4GQ6UXB4 293 aa11.7□□□□□ -0.54
PGK1-204ENST00000477335 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
PGK1-204ENST00000477335 SIRT2Q8IXJ6 389 aa11.7□□□□□ -0.54
PGK1-204ENST00000477335 NIP7Q9Y221 180 aaKnown RBP eCLIP11.7□□□□□ -0.54
PGK1-204ENST00000477335 LRRFIP2Q9Y608 721 aaKnown RBP11.7□□□□□ -0.54
PGK1-204ENST00000477335 FAM177BA6PVY3 158 aa11.69□□□□□ -0.54
PGK1-204ENST00000477335 DDR1Q08345 913 aa11.69□□□□□ -0.54
PGK1-204ENST00000477335 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
PGK1-204ENST00000477335 UBE3BQ7Z3V4 1068 aa11.69□□□□□ -0.54
PGK1-204ENST00000477335 ANKRD44Q8N8A2 993 aa11.69□□□□□ -0.54
PGK1-204ENST00000477335 ABCC12Q96J65 1359 aa11.68□□□□□ -0.54
PGK1-204ENST00000477335 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
PGK1-204ENST00000477335 UBTFL1P0CB47 393 aaPredicted RBP11.68□□□□□ -0.54
PGK1-204ENST00000477335 TM4SF1P30408 202 aa11.68□□□□□ -0.54
PGK1-204ENST00000477335 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
PGK1-204ENST00000477335 CEP85Q6P2H3 762 aa11.68□□□□□ -0.54
PGK1-204ENST00000477335 FAM89AQ96GI7 184 aa11.68□□□□□ -0.54
PGK1-204ENST00000477335 C9orf78Q9NZ63 289 aaPredicted RBP11.68□□□□□ -0.54
PGK1-204ENST00000477335 ZNF652Q9Y2D9 606 aa11.68□□□□□ -0.54
PGK1-204ENST00000477335 CASZ1Q86V15 1759 aa11.68□□□□□ -0.54
PGK1-204ENST00000477335 IGHDP01880 384 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 GNAI2P04899 355 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 GNAI3P08754 354 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 FOXO4P98177 505 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 PARP10Q53GL7 1025 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 B4GALNT3Q6L9W6 998 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 C3orf67Q6ZVT6 689 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
PGK1-204ENST00000477335 FLAD1Q8NFF5 587 aa11.67□□□□□ -0.54
PGK1-204ENST00000477335 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
PGK1-204ENST00000477335 DDX60Q8IY21 1712 aaKnown RBP11.66□□□□□ -0.54
PGK1-204ENST00000477335 PNMA6EA0A0J9YXQ4 647 aa11.66□□□□□ -0.54
PGK1-204ENST00000477335 POLRMTO00411 1230 aaKnown RBP11.66□□□□□ -0.54
PGK1-204ENST00000477335 HMGB2P26583 209 aaKnown RBP11.66□□□□□ -0.54
PGK1-204ENST00000477335 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
PGK1-204ENST00000477335 ERFEQ4G0M1 354 aa11.66□□□□□ -0.54
PGK1-204ENST00000477335 UTP14AQ9BVJ6 771 aaKnown RBP11.66□□□□□ -0.54
PGK1-204ENST00000477335 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
PGK1-204ENST00000477335 TRMT112Q9UI30 125 aaKnown RBP11.66□□□□□ -0.54
PGK1-204ENST00000477335 CARMIL3Q8ND23 1372 aa11.66□□□□□ -0.54
PGK1-204ENST00000477335 COL4A1P02462 1669 aa11.65□□□□□ -0.54
PGK1-204ENST00000477335 TNRC6CQ9HCJ0 1690 aaKnown RBP11.65□□□□□ -0.54
PGK1-204ENST00000477335 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.54
PGK1-204ENST00000477335 HCLS1P14317 486 aaPredicted RBP11.65□□□□□ -0.54
PGK1-204ENST00000477335 SETDB2Q96T68 719 aa11.65□□□□□ -0.54
PGK1-204ENST00000477335 LAMB2P55268 1798 aa11.64□□□□□ -0.55
PGK1-204ENST00000477335 KDM2BQ8NHM5 1336 aa11.64□□□□□ -0.55
PGK1-204ENST00000477335 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
PGK1-204ENST00000477335 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
PGK1-204ENST00000477335 IRS4O14654 1257 aaPredicted RBP11.64□□□□□ -0.55
PGK1-204ENST00000477335 MMP10P09238 476 aa11.64□□□□□ -0.55
PGK1-204ENST00000477335 AAMPQ13685 434 aa11.64□□□□□ -0.55
PGK1-204ENST00000477335 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
PGK1-204ENST00000477335 PRR5LQ6MZQ0 368 aa11.64□□□□□ -0.55
PGK1-204ENST00000477335 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
PGK1-204ENST00000477335 SH3TC1Q8TE82 1336 aa11.63□□□□□ -0.55
PGK1-204ENST00000477335 SERPINB2P05120 415 aa11.63□□□□□ -0.55
PGK1-204ENST00000477335 ATP8B2P98198 1209 aa11.63□□□□□ -0.55
PGK1-204ENST00000477335 MTX1Q13505 466 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 289.8 ms