RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 VPS37CA5D8V6 355 aaPredicted RBP16.19■□□□□ 0.18
HDAC1-206ENST00000476391 EIF3CLB5ME19 914 aaKnown RBP16.19■□□□□ 0.18
HDAC1-206ENST00000476391 CPP00450 1065 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 CEP89Q96ST8 783 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 EIF3CQ99613 913 aaKnown RBP16.19■□□□□ 0.18
HDAC1-206ENST00000476391 CXorf56Q9H5V9 222 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 SNX14Q9Y5W7 946 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 CDK12Q9NYV4 1490 aaPredicted RBP16.19■□□□□ 0.18
HDAC1-206ENST00000476391 CCP110O43303 1012 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 ETF1P62495 437 aaKnown RBP16.19■□□□□ 0.18
HDAC1-206ENST00000476391 DHX37Q8IY37 1157 aaKnown RBP16.19■□□□□ 0.18
HDAC1-206ENST00000476391 C8orf58Q8NAV2 365 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 CARD10Q9BWT7 1032 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 ARFGAP3Q9NP61 516 aa16.19■□□□□ 0.18
HDAC1-206ENST00000476391 EVC2Q86UK5 1308 aa16.18■□□□□ 0.18
HDAC1-206ENST00000476391 HAP1P54257 671 aaPredicted RBP16.18■□□□□ 0.18
HDAC1-206ENST00000476391 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
HDAC1-206ENST00000476391 GPR161Q8N6U8 529 aaKnown RBP16.18■□□□□ 0.18
HDAC1-206ENST00000476391 MKRN1Q9UHC7 482 aaKnown RBP16.18■□□□□ 0.18
HDAC1-206ENST00000476391 NRDCO43847 1150 aa16.18■□□□□ 0.18
HDAC1-206ENST00000476391 CORO7P57737 925 aa16.18■□□□□ 0.18
HDAC1-206ENST00000476391 CCDC150Q8NCX0 1101 aa16.18■□□□□ 0.18
HDAC1-206ENST00000476391 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
HDAC1-206ENST00000476391 STAP2Q9UGK3 403 aa16.18■□□□□ 0.18
HDAC1-206ENST00000476391 TTC41PQ6P2S7 1318 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 LRRFIP1Q32MZ4 808 aaKnown RBP16.17■□□□□ 0.18
HDAC1-206ENST00000476391 DNAI1Q9UI46 699 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 KCNG1Q9UIX4 513 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
HDAC1-206ENST00000476391 MMS22LQ6ZRQ5 1243 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 CCDC83Q8IWF9 413 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 MEIS3Q99687 375 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 FUT8Q9BYC5 575 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 MED4Q9NPJ6 270 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 HYPKQ9NX55 129 aa16.17■□□□□ 0.18
HDAC1-206ENST00000476391 AOX1Q06278 1338 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 STX1AQ16623 288 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 SPATA32Q96LK8 384 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 LRRCC1Q9C099 1032 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 CPSF1Q10570 1443 aaKnown RBP16.16■□□□□ 0.18
HDAC1-206ENST00000476391 BECN2A8MW95 431 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 NR1I2O75469 434 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 PDCP20941 246 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 CEP120Q8N960 986 aa16.16■□□□□ 0.18
HDAC1-206ENST00000476391 THUMPD2Q9BTF0 503 aaKnown RBP16.16■□□□□ 0.18
HDAC1-206ENST00000476391 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-206ENST00000476391 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 GGNBP2Q9H3C7 697 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 CTAGE5O15320 804 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 LARGE1O95461 756 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 EVCP57679 992 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 VPS53Q5VIR6 699 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 JAKMIP3Q5VZ66 844 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 LARP1BQ659C4 914 aaKnown RBP16.15■□□□□ 0.18
HDAC1-206ENST00000476391 RPAINQ86UA6 219 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 EFCAB13Q8IY85 973 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
HDAC1-206ENST00000476391 A0A1W2PP64 1363 aa16.14■□□□□ 0.17
HDAC1-206ENST00000476391 GNAI3P08754 354 aa16.14■□□□□ 0.17
HDAC1-206ENST00000476391 GORABQ5T7V8 394 aa16.14■□□□□ 0.17
HDAC1-206ENST00000476391 HOMER1Q86YM7 354 aa16.14■□□□□ 0.17
HDAC1-206ENST00000476391 MSL3Q8N5Y2 521 aaKnown RBP16.14■□□□□ 0.17
HDAC1-206ENST00000476391 LEO1Q8WVC0 666 aaPredicted RBP16.14■□□□□ 0.17
HDAC1-206ENST00000476391 SMC2O95347 1197 aa16.14■□□□□ 0.17
HDAC1-206ENST00000476391 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
HDAC1-206ENST00000476391 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
HDAC1-206ENST00000476391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDAC1-206ENST00000476391 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 SATB1Q01826 763 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
HDAC1-206ENST00000476391 C11orf57Q6ZUT1 292 aaPredicted RBP16.13■□□□□ 0.17
HDAC1-206ENST00000476391 BICD2Q8TD16 824 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 CARD6Q9BX69 1037 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 IL25Q9H293 177 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 C14orf93Q9H972 538 aaKnown RBP16.13■□□□□ 0.17
HDAC1-206ENST00000476391 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 MAP2K7O14733 419 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 SGSM2O43147 1006 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
HDAC1-206ENST00000476391 LARP6Q9BRS8 491 aaKnown RBP16.13■□□□□ 0.17
HDAC1-206ENST00000476391 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
HDAC1-206ENST00000476391 NBPF11Q86T75 865 aa16.12■□□□□ 0.17
HDAC1-206ENST00000476391 RASEFQ8IZ41 740 aa16.12■□□□□ 0.17
HDAC1-206ENST00000476391 ANKRD20A12PQ8NF67 263 aa16.12■□□□□ 0.17
HDAC1-206ENST00000476391 HECW2Q9P2P5 1572 aa16.12■□□□□ 0.17
HDAC1-206ENST00000476391 EFCAB6Q5THR3 1501 aa16.12■□□□□ 0.17
HDAC1-206ENST00000476391 CCDC196A0A1B0GTZ2 297 aa16.11■□□□□ 0.17
HDAC1-206ENST00000476391 CCDC151A5D8V7 595 aa16.11■□□□□ 0.17
HDAC1-206ENST00000476391 H3BQF6 201 aa16.11■□□□□ 0.17
HDAC1-206ENST00000476391 MAP2K2P36507 400 aa16.11■□□□□ 0.17
HDAC1-206ENST00000476391 E2F4Q16254 413 aa16.11■□□□□ 0.17
HDAC1-206ENST00000476391 EP400NLQ6ZTU2 488 aa16.11■□□□□ 0.17
HDAC1-206ENST00000476391 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
HDAC1-206ENST00000476391 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
HDAC1-206ENST00000476391 DHX40Q8IX18 779 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms