RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 RIC1Q4ADV7 1423 aa17■□□□□ 0.31
VSTM4-203ENST00000476018 SCN4AP35499 1836 aa17■□□□□ 0.31
VSTM4-203ENST00000476018 NUP98P52948 1817 aa17■□□□□ 0.31
VSTM4-203ENST00000476018 MYL6BP14649 208 aa16.99■□□□□ 0.31
VSTM4-203ENST00000476018 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
VSTM4-203ENST00000476018 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
VSTM4-203ENST00000476018 CC2D2BQ6DHV5 1058 aa16.99■□□□□ 0.31
VSTM4-203ENST00000476018 THUMPD2Q9BTF0 503 aaKnown RBP16.99■□□□□ 0.31
VSTM4-203ENST00000476018 ZNF277Q9NRM2 450 aaPredicted RBP16.99■□□□□ 0.31
VSTM4-203ENST00000476018 TSPYL4Q9UJ04 414 aa16.99■□□□□ 0.31
VSTM4-203ENST00000476018 ABCC12Q96J65 1359 aa16.99■□□□□ 0.31
VSTM4-203ENST00000476018 GRIPAP1Q4V328 841 aa16.98■□□□□ 0.31
VSTM4-203ENST00000476018 TTLL7Q6ZT98 887 aa16.98■□□□□ 0.31
VSTM4-203ENST00000476018 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
VSTM4-203ENST00000476018 BABAM1Q9NWV8 329 aa16.98■□□□□ 0.31
VSTM4-203ENST00000476018 IARSP41252 1262 aaKnown RBP16.97■□□□□ 0.31
VSTM4-203ENST00000476018 LDHDQ86WU2 507 aa16.97■□□□□ 0.31
VSTM4-203ENST00000476018 NUTM1Q86Y26 1132 aa16.97■□□□□ 0.31
VSTM4-203ENST00000476018 PSMD1Q99460 953 aa16.97■□□□□ 0.31
VSTM4-203ENST00000476018 ZBTB3Q9H5J0 574 aa16.97■□□□□ 0.31
VSTM4-203ENST00000476018 CREBZFQ9NS37 354 aa16.97■□□□□ 0.31
VSTM4-203ENST00000476018 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
VSTM4-203ENST00000476018 GPTP24298 496 aa16.96■□□□□ 0.31
VSTM4-203ENST00000476018 RIPK4P57078 832 aa16.96■□□□□ 0.31
VSTM4-203ENST00000476018 GIGYF2Q6Y7W6 1299 aaKnown RBP16.96■□□□□ 0.31
VSTM4-203ENST00000476018 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
VSTM4-203ENST00000476018 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
VSTM4-203ENST00000476018 UBN2Q6ZU65 1347 aa16.96■□□□□ 0.3
VSTM4-203ENST00000476018 HOXA10P31260 410 aaPredicted RBP16.95■□□□□ 0.3
VSTM4-203ENST00000476018 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
VSTM4-203ENST00000476018 OLFM4Q6UX06 510 aa16.95■□□□□ 0.3
VSTM4-203ENST00000476018 ZNF34Q8IZ26 560 aa16.95■□□□□ 0.3
VSTM4-203ENST00000476018 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
VSTM4-203ENST00000476018 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
VSTM4-203ENST00000476018 HACL1Q9UJ83 578 aa16.95■□□□□ 0.3
VSTM4-203ENST00000476018 ZNF541Q9H0D2 1346 aa16.95■□□□□ 0.3
VSTM4-203ENST00000476018 FZD9O00144 591 aa16.94■□□□□ 0.3
VSTM4-203ENST00000476018 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
VSTM4-203ENST00000476018 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
VSTM4-203ENST00000476018 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
VSTM4-203ENST00000476018 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
VSTM4-203ENST00000476018 NTSR2O95665 410 aa16.93■□□□□ 0.3
VSTM4-203ENST00000476018 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
VSTM4-203ENST00000476018 SUSD4Q5VX71 490 aa16.93■□□□□ 0.3
VSTM4-203ENST00000476018 PNMA8AQ86V59 439 aaPredicted RBP16.93■□□□□ 0.3
VSTM4-203ENST00000476018 GPC2Q8N158 579 aa16.93■□□□□ 0.3
VSTM4-203ENST00000476018 CRAMP1Q96RY5 1269 aa16.93■□□□□ 0.3
VSTM4-203ENST00000476018 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
VSTM4-203ENST00000476018 SNED1Q8TER0 1413 aa16.93■□□□□ 0.3
VSTM4-203ENST00000476018 RNF123Q5XPI4 1314 aa16.93■□□□□ 0.3
VSTM4-203ENST00000476018 HSPA1AP0DMV8 641 aaKnown RBP16.92■□□□□ 0.3
VSTM4-203ENST00000476018 HSPA1BP0DMV9 641 aaKnown RBP16.92■□□□□ 0.3
VSTM4-203ENST00000476018 TMPOP42166 694 aaKnown RBP16.92■□□□□ 0.3
VSTM4-203ENST00000476018 EAPPQ56P03 285 aaPredicted RBP16.92■□□□□ 0.3
VSTM4-203ENST00000476018 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
VSTM4-203ENST00000476018 PPEF1O14829 653 aaPredicted RBP16.91■□□□□ 0.3
VSTM4-203ENST00000476018 EPHX2P34913 555 aa16.91■□□□□ 0.3
VSTM4-203ENST00000476018 EIF6P56537 245 aaKnown RBP16.91■□□□□ 0.3
VSTM4-203ENST00000476018 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
VSTM4-203ENST00000476018 COL13A1Q5TAT6 717 aaPredicted RBP16.91■□□□□ 0.3
VSTM4-203ENST00000476018 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
VSTM4-203ENST00000476018 UTP14AQ9BVJ6 771 aaKnown RBP16.91■□□□□ 0.3
VSTM4-203ENST00000476018 PASKQ96RG2 1323 aa16.91■□□□□ 0.3
VSTM4-203ENST00000476018 PDIA6Q15084 440 aa16.9■□□□□ 0.3
VSTM4-203ENST00000476018 LRP10Q7Z4F1 713 aa16.9■□□□□ 0.3
VSTM4-203ENST00000476018 CLEC11AQ9Y240 323 aa16.9■□□□□ 0.3
VSTM4-203ENST00000476018 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
VSTM4-203ENST00000476018 LARGE2Q8N3Y3 721 aa16.89■□□□□ 0.29
VSTM4-203ENST00000476018 CNTNAP1P78357 1384 aa16.89■□□□□ 0.29
VSTM4-203ENST00000476018 ADAMTSL1Q8N6G6 1762 aa16.88■□□□□ 0.29
VSTM4-203ENST00000476018 TMEM88BA6NKF7 163 aa16.88■□□□□ 0.29
VSTM4-203ENST00000476018 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
VSTM4-203ENST00000476018 TNS4Q8IZW8 715 aa16.88■□□□□ 0.29
VSTM4-203ENST00000476018 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
VSTM4-203ENST00000476018 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
VSTM4-203ENST00000476018 PROSER3Q2NL68 480 aa16.87■□□□□ 0.29
VSTM4-203ENST00000476018 SLC10A5Q5PT55 438 aa16.87■□□□□ 0.29
VSTM4-203ENST00000476018 SPDYE1Q8NFV5 336 aaPredicted RBP16.87■□□□□ 0.29
VSTM4-203ENST00000476018 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
VSTM4-203ENST00000476018 VPS33BQ9H267 617 aa16.87■□□□□ 0.29
VSTM4-203ENST00000476018 GJA3Q9Y6H8 435 aa16.87■□□□□ 0.29
VSTM4-203ENST00000476018 ITGBL1O95965 494 aaPredicted RBP16.86■□□□□ 0.29
VSTM4-203ENST00000476018 ANXA1P04083 346 aa16.86■□□□□ 0.29
VSTM4-203ENST00000476018 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
VSTM4-203ENST00000476018 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
VSTM4-203ENST00000476018 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
VSTM4-203ENST00000476018 SUPT20HQ8NEM7 779 aa16.86■□□□□ 0.29
VSTM4-203ENST00000476018 DDX21Q9NR30 783 aaKnown RBP eCLIP16.86■□□□□ 0.29
VSTM4-203ENST00000476018 ATP6V0A2Q9Y487 856 aa16.86■□□□□ 0.29
VSTM4-203ENST00000476018 CHL1O00533 1208 aa16.85■□□□□ 0.29
VSTM4-203ENST00000476018 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
VSTM4-203ENST00000476018 PPIP5K2O43314 1243 aa16.85■□□□□ 0.29
VSTM4-203ENST00000476018 HOXB7P09629 217 aa16.85■□□□□ 0.29
VSTM4-203ENST00000476018 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
VSTM4-203ENST00000476018 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
VSTM4-203ENST00000476018 C3orf67Q6ZVT6 689 aa16.85■□□□□ 0.29
VSTM4-203ENST00000476018 CCDC146Q8IYE0 955 aa16.85■□□□□ 0.29
VSTM4-203ENST00000476018 CNTROBQ8N137 903 aa16.85■□□□□ 0.29
VSTM4-203ENST00000476018 XAGE3Q8WTP9 111 aa16.85■□□□□ 0.29
VSTM4-203ENST00000476018 NECTIN2Q92692 538 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms