RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 PIP4K2BP78356 416 aa20.39■□□□□ 0.85
LPCAT1-202ENST00000475622 TTF1Q15361 905 aaPredicted RBP20.39■□□□□ 0.85
LPCAT1-202ENST00000475622 LDHAL6AQ6ZMR3 332 aa20.39■□□□□ 0.85
LPCAT1-202ENST00000475622 HMG20BQ9P0W2 317 aa20.39■□□□□ 0.85
LPCAT1-202ENST00000475622 NCOA7Q8NI08 942 aa20.38■□□□□ 0.85
LPCAT1-202ENST00000475622 TMX3Q96JJ7 454 aa20.38■□□□□ 0.85
LPCAT1-202ENST00000475622 PAXBP1Q9Y5B6 917 aa20.38■□□□□ 0.85
LPCAT1-202ENST00000475622 PYM1Q9BRP8 204 aaKnown RBP20.38■□□□□ 0.85
LPCAT1-202ENST00000475622 PRC1O43663 620 aa20.38■□□□□ 0.85
LPCAT1-202ENST00000475622 MFSD6Q6ZSS7 791 aa20.38■□□□□ 0.85
LPCAT1-202ENST00000475622 DHX29Q7Z478 1369 aaKnown RBP20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 TSPY2A6NKD2 308 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 DYNC1I1O14576 645 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 SLF2Q8IX21 1173 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 PRIMPOLQ96LW4 560 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 ATP5J2-PTCD1G3V325 749 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 ZSCAN22P10073 491 aaPredicted RBP20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 EHMT1Q9H9B1 1298 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 LRSAM1Q6UWE0 723 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 NECAB1Q8N987 351 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 ZSCAN16Q9H4T2 348 aaPredicted RBP20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 HECW1Q76N89 1606 aa20.37■□□□□ 0.85
LPCAT1-202ENST00000475622 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 TRIM47Q96LD4 638 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 FSD2A1L4K1 749 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 PI4KAP2A4QPH2 592 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 AKR1B10O60218 316 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 PI4KAP1Q8N8J0 262 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 BRF1Q92994 677 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 KAT14Q9H8E8 782 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 PODXL2Q9NZ53 605 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 MBIPQ9NS73 344 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 SYKP43405 635 aa20.36■□□□□ 0.85
LPCAT1-202ENST00000475622 WDR78Q5VTH9 848 aa20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 ZNF830Q96NB3 372 aaPredicted RBP20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 SPECC1LQ69YQ0 1117 aa20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 UBASH3AP57075 661 aa20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 ZHX1Q9UKY1 873 aaPredicted RBP20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 PDE4BQ07343 736 aa20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 RNF216Q9NWF9 866 aaPredicted RBP20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 EHBP1Q8NDI1 1231 aa20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 RPGRQ92834 1020 aaKnown RBP20.35■□□□□ 0.85
LPCAT1-202ENST00000475622 GIGYF2Q6Y7W6 1299 aaKnown RBP20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 SYCP3Q8IZU3 236 aa20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 CEP112Q8N8E3 955 aa20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 CCDC171Q6TFL3 1326 aa20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 CEP63Q96MT8 703 aa20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 IPO4Q8TEX9 1081 aaKnown RBP20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 FAM83GA6ND36 823 aa20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 STXBP4Q6ZWJ1 553 aa20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 HOMER2Q9NSB8 354 aa20.34■□□□□ 0.85
LPCAT1-202ENST00000475622 FOXO3O43524 673 aa20.33■□□□□ 0.85
LPCAT1-202ENST00000475622 KLF18A0A0U1RQI7 1052 aa20.33■□□□□ 0.85
LPCAT1-202ENST00000475622 FERMT2Q96AC1 680 aa20.33■□□□□ 0.85
LPCAT1-202ENST00000475622 CCDC141Q6ZP82 1450 aa20.33■□□□□ 0.85
LPCAT1-202ENST00000475622 WASLO00401 505 aaPredicted RBP20.33■□□□□ 0.84
LPCAT1-202ENST00000475622 SKILP12757 684 aa20.33■□□□□ 0.84
LPCAT1-202ENST00000475622 SDSP20132 328 aa20.33■□□□□ 0.84
LPCAT1-202ENST00000475622 RHPN1Q8TCX5 695 aa20.33■□□□□ 0.84
LPCAT1-202ENST00000475622 CNPY2Q9Y2B0 182 aa20.33■□□□□ 0.84
LPCAT1-202ENST00000475622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.841e-6■■■□□ 18.3
LPCAT1-202ENST00000475622 SUPT6HQ7KZ85 1726 aaKnown RBP20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 C6orf229H3BNL8 230 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 LDHCP07864 332 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 SLC4A8Q2Y0W8 1093 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 ANO6Q4KMQ2 910 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 HSP90AA4PQ58FG1 418 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 RRAGBQ5VZM2 374 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 EXOC1Q9NV70 894 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 JARID2Q92833 1246 aaPredicted RBP20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
LPCAT1-202ENST00000475622 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 AFMP43652 599 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 ZFP91Q96JP5 570 aaPredicted RBP20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 DRC1Q96MC2 740 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 TCEANC2Q96MN5 208 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 PUF60Q9UHX1 559 aaKnown RBP20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 HSF2BPO75031 334 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 HMGB2P26583 209 aaKnown RBP20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 NUCB1Q02818 461 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 CCDC186Q7Z3E2 898 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 ADGRF5Q8IZF2 1346 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 RBM25P49756 843 aaKnown RBP20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 KIAA0753Q2KHM9 967 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 LRRC2Q9BYS8 371 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 RMND1Q9NWS8 449 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 TTC21AQ8NDW8 1320 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 NBPF7P0C2Y1 421 aaPredicted RBP20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 DNAI1Q9UI46 699 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 POGZQ7Z3K3 1410 aa20.31■□□□□ 0.84
LPCAT1-202ENST00000475622 CDC5LQ99459 802 aaKnown RBP20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 LRRC27Q9C0I9 530 aa20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 NOLC1Q14978 699 aaKnown RBP eCLIP20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 BAG3O95817 575 aa20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 IFI16Q16666 785 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms