RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CCDC30Q5VVM6 783 aa26.45■■□□□ 1.82
SNX13-206ENST00000474067 DPY19L2Q6NUT2 758 aa26.45■■□□□ 1.82
SNX13-206ENST00000474067 ANKRD13DQ6ZTN6 518 aa26.45■■□□□ 1.82
SNX13-206ENST00000474067 NUTM1Q86Y26 1132 aa26.45■■□□□ 1.82
SNX13-206ENST00000474067 ANKRD36CQ5JPF3 1778 aa26.44■■□□□ 1.82
SNX13-206ENST00000474067 NTSR2O95665 410 aa26.44■■□□□ 1.82
SNX13-206ENST00000474067 GOLGA2Q08379 1002 aa26.44■■□□□ 1.82
SNX13-206ENST00000474067 RBM17Q96I25 401 aaKnown RBP26.44■■□□□ 1.82
SNX13-206ENST00000474067 ZNF219Q9P2Y4 722 aaPredicted RBP26.44■■□□□ 1.82
SNX13-206ENST00000474067 NFKBIEO00221 500 aa26.43■■□□□ 1.82
SNX13-206ENST00000474067 WWC1Q8IX03 1113 aa26.43■■□□□ 1.82
SNX13-206ENST00000474067 DDX58O95786 925 aaKnown RBP26.42■■□□□ 1.82
SNX13-206ENST00000474067 HSP90B1P14625 803 aaKnown RBP26.42■■□□□ 1.82
SNX13-206ENST00000474067 CACNA1SQ13698 1873 aa26.42■■□□□ 1.82
SNX13-206ENST00000474067 FER1L6Q2WGJ9 1857 aa26.42■■□□□ 1.82
SNX13-206ENST00000474067 TOMM70O94826 608 aa26.41■■□□□ 1.82
SNX13-206ENST00000474067 HOXA10P31260 410 aaPredicted RBP26.41■■□□□ 1.82
SNX13-206ENST00000474067 ABCC12Q96J65 1359 aa26.41■■□□□ 1.82
SNX13-206ENST00000474067 SLX4Q8IY92 1834 aa26.41■■□□□ 1.82
SNX13-206ENST00000474067 SH3TC1Q8TE82 1336 aa26.4■■□□□ 1.82
SNX13-206ENST00000474067 SENP3-EIF4A1A0A087X0R7 540 aa26.4■■□□□ 1.82
SNX13-206ENST00000474067 SLC10A5Q5PT55 438 aa26.4■■□□□ 1.82
SNX13-206ENST00000474067 CRAMP1Q96RY5 1269 aa26.4■■□□□ 1.82
SNX13-206ENST00000474067 STK31Q9BXU1 1019 aa26.4■■□□□ 1.82
SNX13-206ENST00000474067 TRMT112Q9UI30 125 aaKnown RBP26.4■■□□□ 1.82
SNX13-206ENST00000474067 TNRC6CQ9HCJ0 1690 aaKnown RBP26.4■■□□□ 1.82
SNX13-206ENST00000474067 KIF3CO14782 793 aa26.39■■□□□ 1.82
SNX13-206ENST00000474067 NLRP10Q86W26 655 aa26.39■■□□□ 1.82
SNX13-206ENST00000474067 WDR63Q8IWG1 891 aa26.39■■□□□ 1.82
SNX13-206ENST00000474067 GLTPD2A6NH11 291 aa26.38■■□□□ 1.81
SNX13-206ENST00000474067 FKBP4Q02790 459 aaKnown RBP eCLIP26.38■■□□□ 1.81
SNX13-206ENST00000474067 RIC3Q7Z5B4 369 aa26.38■■□□□ 1.81
SNX13-206ENST00000474067 TIAM2Q8IVF5 1701 aa26.37■■□□□ 1.81
SNX13-206ENST00000474067 ELL2O00472 640 aaPredicted RBP26.37■■□□□ 1.81
SNX13-206ENST00000474067 C7orf43Q8WVR3 580 aa26.37■■□□□ 1.81
SNX13-206ENST00000474067 DICER1Q9UPY3 1922 aaKnown RBP26.35■■□□□ 1.81
SNX13-206ENST00000474067 CCDC88AQ3V6T2 1871 aa26.35■■□□□ 1.81
SNX13-206ENST00000474067 TRIM28Q13263 835 aaKnown RBP26.34■■□□□ 1.81
SNX13-206ENST00000474067 FAM9BQ8IZU0 186 aa26.34■■□□□ 1.81
SNX13-206ENST00000474067 C8orf58Q8NAV2 365 aa26.34■■□□□ 1.81
SNX13-206ENST00000474067 NMRK2Q9NPI5 230 aa26.34■■□□□ 1.81
SNX13-206ENST00000474067 VEGFAP15692 232 aaPredicted RBP26.33■■□□□ 1.81
SNX13-206ENST00000474067 TWISTNBQ3B726 338 aaPredicted RBP26.33■■□□□ 1.81
SNX13-206ENST00000474067 RBM46Q8TBY0 533 aaKnown RBP26.33■■□□□ 1.81
SNX13-206ENST00000474067 PSMD1Q99460 953 aa26.33■■□□□ 1.81
SNX13-206ENST00000474067 PPEF1O14829 653 aaPredicted RBP26.32■■□□□ 1.8
SNX13-206ENST00000474067 DDX46Q7L014 1031 aaKnown RBP26.32■■□□□ 1.8
SNX13-206ENST00000474067 TMC4Q7Z404 712 aa26.32■■□□□ 1.8
SNX13-206ENST00000474067 ISCA1Q9BUE6 129 aa26.32■■□□□ 1.8
SNX13-206ENST00000474067 MYH16Q9H6N6 1097 aa26.32■■□□□ 1.8
SNX13-206ENST00000474067 BBOX1O75936 387 aa26.31■■□□□ 1.8
SNX13-206ENST00000474067 TSR2Q969E8 191 aaKnown RBP26.31■■□□□ 1.8
SNX13-206ENST00000474067 RRAGCQ9HB90 399 aa26.3■■□□□ 1.8
SNX13-206ENST00000474067 HSPA6P17066 643 aa26.29■■□□□ 1.8
SNX13-206ENST00000474067 NEXNQ0ZGT2 675 aa26.29■■□□□ 1.8
SNX13-206ENST00000474067 FSTL1Q12841 308 aa26.29■■□□□ 1.8
SNX13-206ENST00000474067 SUPT20HQ8NEM7 779 aa26.29■■□□□ 1.8
SNX13-206ENST00000474067 JDP2Q8WYK2 163 aa26.29■■□□□ 1.8
SNX13-206ENST00000474067 VPS33BQ9H267 617 aa26.29■■□□□ 1.8
SNX13-206ENST00000474067 IARSP41252 1262 aaKnown RBP26.28■■□□□ 1.8
SNX13-206ENST00000474067 PRELPP51888 382 aa26.28■■□□□ 1.8
SNX13-206ENST00000474067 CCDC191Q8NCU4 936 aa26.28■■□□□ 1.8
SNX13-206ENST00000474067 SYNE4Q8N205 404 aa26.27■■□□□ 1.8
SNX13-206ENST00000474067 PHAXQ9H814 394 aaKnown RBP26.27■■□□□ 1.8
SNX13-206ENST00000474067 IQCA1LA6NCM1 817 aa26.26■■□□□ 1.79
SNX13-206ENST00000474067 ZBTB38Q8NAP3 1195 aaPredicted RBP26.26■■□□□ 1.79
SNX13-206ENST00000474067 ATP6V0A2Q9Y487 856 aa26.26■■□□□ 1.79
SNX13-206ENST00000474067 ABCC4O15439 1325 aa26.25■■□□□ 1.79
SNX13-206ENST00000474067 FANCIQ9NVI1 1328 aa26.25■■□□□ 1.79
SNX13-206ENST00000474067 ATP5J2-PTCD1G3V325 749 aa26.25■■□□□ 1.79
SNX13-206ENST00000474067 HCLS1P14317 486 aaPredicted RBP26.25■■□□□ 1.79
SNX13-206ENST00000474067 GRAPQ13588 217 aa26.25■■□□□ 1.79
SNX13-206ENST00000474067 KSR2Q6VAB6 950 aa26.25■■□□□ 1.79
SNX13-206ENST00000474067 TSPYL6Q8N831 410 aa26.25■■□□□ 1.79
SNX13-206ENST00000474067 SMC1BQ8NDV3 1235 aa26.25■■□□□ 1.79
SNX13-206ENST00000474067 GRAPLQ8TC17 118 aaPredicted RBP26.25■■□□□ 1.79
SNX13-206ENST00000474067 METTL22Q9BUU2 404 aaPredicted RBP26.25■■□□□ 1.79
SNX13-206ENST00000474067 SALL2Q9Y467 1007 aaPredicted RBP26.25■■□□□ 1.79
SNX13-206ENST00000474067 MYD88Q99836 296 aa26.24■■□□□ 1.79
SNX13-206ENST00000474067 ZNF277Q9NRM2 450 aaPredicted RBP26.24■■□□□ 1.79
SNX13-206ENST00000474067 CWC25Q9NXE8 425 aaPredicted RBP26.24■■□□□ 1.79
SNX13-206ENST00000474067 WDR90Q96KV7 1748 aa26.24■■□□□ 1.79
SNX13-206ENST00000474067 APLP1P51693 650 aa26.23■■□□□ 1.79
SNX13-206ENST00000474067 SF3B3Q15393 1217 aaKnown RBP26.23■■□□□ 1.79
SNX13-206ENST00000474067 SP8Q8IXZ3 490 aa26.23■■□□□ 1.79
SNX13-206ENST00000474067 FAM89AQ96GI7 184 aa26.23■■□□□ 1.79
SNX13-206ENST00000474067 IRS4O14654 1257 aaPredicted RBP26.22■■□□□ 1.79
SNX13-206ENST00000474067 SLC4A2P04920 1241 aa26.22■■□□□ 1.79
SNX13-206ENST00000474067 CACNA1FO60840 1977 aa26.22■■□□□ 1.79
SNX13-206ENST00000474067 EIF6P56537 245 aaKnown RBP26.21■■□□□ 1.79
SNX13-206ENST00000474067 MAP3K2Q9Y2U5 619 aa26.21■■□□□ 1.79
SNX13-206ENST00000474067 PCCAP05165 728 aaPredicted RBP26.2■■□□□ 1.78
SNX13-206ENST00000474067 C3orf67Q6ZVT6 689 aa26.2■■□□□ 1.78
SNX13-206ENST00000474067 LARGE2Q8N3Y3 721 aa26.2■■□□□ 1.78
SNX13-206ENST00000474067 LAMB2P55268 1798 aa26.2■■□□□ 1.78
SNX13-206ENST00000474067 PI4KAP2A4QPH2 592 aa26.19■■□□□ 1.78
SNX13-206ENST00000474067 DPP8Q6V1X1 898 aaPredicted RBP26.19■■□□□ 1.78
SNX13-206ENST00000474067 PI4KAP1Q8N8J0 262 aa26.19■■□□□ 1.78
SNX13-206ENST00000474067 SNED1Q8TER0 1413 aa26.19■■□□□ 1.78
SNX13-206ENST00000474067 FZD9O00144 591 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms