RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 POGZQ7Z3K3 1410 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 LMTK2Q8IWU2 1503 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 RAD21O60216 631 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 POU4F2Q12837 409 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 PDE3BQ13370 1112 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 OXLD1Q5BKU9 147 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 ESCO1Q5FWF5 840 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 WDR44Q5JSH3 913 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 PLPP7Q8NBV4 271 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 XAGE2Q96GT9 111 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 POM121Q96HA1 1249 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 GMCL1Q96IK5 515 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 CNTNAP3BQ96NU0 1288 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 COL25A1Q9BXS0 654 aaPredicted RBP7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 CNTNAP3Q9BZ76 1288 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 KNSTRNQ9Y448 316 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 HRH3Q9Y5N1 445 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 MADDQ8WXG6 1647 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 INSRP06213 1382 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 MYOM2P54296 1465 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 NEO1Q92859 1461 aa7.8□□□□□ -1.16
ATPAF1-204ENST00000474020 EFCAB6Q5THR3 1501 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 CLTCL1P53675 1640 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 CENPCQ03188 943 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 CCDC184Q52MB2 194 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 NBPF10Q6P3W6 841 aaKnown RBP7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 NBPF15Q8N660 670 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 CUEDC1Q9NWM3 386 aaPredicted RBP7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 DYRK1BQ9Y463 629 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 PARD3Q8TEW0 1356 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 MLH3Q9UHC1 1453 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 HECW2Q9P2P5 1572 aa7.79□□□□□ -1.16
ATPAF1-204ENST00000474020 ZMYM4Q5VZL5 1548 aa7.78□□□□□ -1.16
ATPAF1-204ENST00000474020 KIAA1210Q9ULL0 1709 aa7.78□□□□□ -1.16
ATPAF1-204ENST00000474020 WASLO00401 505 aaPredicted RBP7.78□□□□□ -1.16
ATPAF1-204ENST00000474020 TAS1R3Q7RTX0 852 aa7.78□□□□□ -1.16
ATPAF1-204ENST00000474020 PNISRQ8TF01 805 aaKnown RBP7.78□□□□□ -1.16
ATPAF1-204ENST00000474020 ALG2Q9H553 416 aa7.78□□□□□ -1.16
ATPAF1-204ENST00000474020 RPGRIP1LQ68CZ1 1315 aa7.78□□□□□ -1.16
ATPAF1-204ENST00000474020 LRPPRCP42704 1394 aaKnown RBP7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 DISP3Q9P2K9 1392 aa7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 WDR43Q15061 677 aaKnown RBP eCLIP7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 RNFT1Q5M7Z0 435 aa7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 TRIM22Q8IYM9 498 aa7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 TESK2Q96S53 571 aa7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 FHDC1Q9C0D6 1143 aaPredicted RBP7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 PANK3Q9H999 370 aa7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 ETNK1Q9HBU6 452 aa7.77□□□□□ -1.17
ATPAF1-204ENST00000474020 IQGAP1P46940 1657 aa7.76□□□□□ -1.17
ATPAF1-204ENST00000474020 SYNMO15061 1565 aa7.76□□□□□ -1.17
ATPAF1-204ENST00000474020 KIF1BO60333 1816 aa7.76□□□□□ -1.17
ATPAF1-204ENST00000474020 CC2D1BQ5T0F9 858 aaKnown RBP7.76□□□□□ -1.17
ATPAF1-204ENST00000474020 ZNF837Q96EG3 531 aaPredicted RBP7.76□□□□□ -1.17
ATPAF1-204ENST00000474020 ZSCAN10Q96SZ4 725 aaPredicted RBP7.76□□□□□ -1.17
ATPAF1-204ENST00000474020 TIMMDC1Q9NPL8 285 aa7.76□□□□□ -1.17
ATPAF1-204ENST00000474020 KIDINS220Q9ULH0 1771 aa7.75□□□□□ -1.17
ATPAF1-204ENST00000474020 H7C1W4 665 aa7.75□□□□□ -1.17
ATPAF1-204ENST00000474020 PIK3CDO00329 1044 aa7.75□□□□□ -1.17
ATPAF1-204ENST00000474020 GTF2E1P29083 439 aaPredicted RBP7.75□□□□□ -1.17
ATPAF1-204ENST00000474020 FOXR1Q6PIV2 292 aa7.75□□□□□ -1.17
ATPAF1-204ENST00000474020 RIPOR1Q6ZS17 1223 aa7.75□□□□□ -1.17
ATPAF1-204ENST00000474020 GAS2L1Q99501 681 aaPredicted RBP7.75□□□□□ -1.17
ATPAF1-204ENST00000474020 MROH1Q8NDA8 1641 aa7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 MAP3K4Q9Y6R4 1608 aa7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 NPC1L1Q9UHC9 1359 aa7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 STAU1O95793 577 aaKnown RBP7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 SCNN1DP51172 638 aa7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 IRX6P78412 446 aaPredicted RBP7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 DBN1Q16643 649 aa7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 GGT6Q6P531 493 aa7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 ILDR2Q71H61 639 aa7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 NFATC2IPQ8NCF5 419 aa7.74□□□□□ -1.17
ATPAF1-204ENST00000474020 KDM5AP29375 1690 aaKnown RBP7.73□□□□□ -1.17
ATPAF1-204ENST00000474020 PPRC1Q5VV67 1664 aaKnown RBP7.73□□□□□ -1.17
ATPAF1-204ENST00000474020 ASXL1Q8IXJ9 1541 aa7.73□□□□□ -1.17
ATPAF1-204ENST00000474020 LZTS3O60299 673 aaPredicted RBP7.73□□□□□ -1.17
ATPAF1-204ENST00000474020 GDF10P55107 478 aa7.73□□□□□ -1.17
ATPAF1-204ENST00000474020 GNASQ5JWF2 1037 aa7.73□□□□□ -1.17
ATPAF1-204ENST00000474020 TMEM214Q6NUQ4 689 aaKnown RBP7.73□□□□□ -1.17
ATPAF1-204ENST00000474020 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
ATPAF1-204ENST00000474020 SBNO2Q9Y2G9 1366 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 SETBP1Q9Y6X0 1596 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 F11P03951 625 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 INHAP05111 366 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 SLURP2P0DP57 97 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 SKIP12755 728 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 GAS6Q14393 721 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 TLR1Q15399 786 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 EML3Q32P44 896 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 C4orf17Q53FE4 359 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 RHBDD1Q8TEB9 315 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 CCDC136Q96JN2 1154 aa7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 ZC3H13Q5T200 1668 aaKnown RBP7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 CENPJQ9HC77 1338 aaPredicted RBP7.72□□□□□ -1.17
ATPAF1-204ENST00000474020 KIF13AQ9H1H9 1805 aa7.71□□□□□ -1.17
ATPAF1-204ENST00000474020 NRXN1Q9ULB1 1477 aa7.71□□□□□ -1.18
ATPAF1-204ENST00000474020 A0A1B0GTH6 734 aa7.71□□□□□ -1.18
ATPAF1-204ENST00000474020 POM121CA8CG34 1229 aa7.71□□□□□ -1.18
ATPAF1-204ENST00000474020 PHKA2P46019 1235 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms