RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 HYPKQ9NX55 129 aa14.88□□□□□ -0.03
CPNE1-222ENST00000473373 SRGNP10124 158 aa14.87□□□□□ -0.03
CPNE1-222ENST00000473373 GOLGA2Q08379 1002 aa14.87□□□□□ -0.03
CPNE1-222ENST00000473373 ERFEQ4G0M1 354 aa14.87□□□□□ -0.03
CPNE1-222ENST00000473373 SOGA3Q5TF21 947 aa14.87□□□□□ -0.03
CPNE1-222ENST00000473373 PRPF40BQ6NWY9 871 aaKnown RBP14.87□□□□□ -0.03
CPNE1-222ENST00000473373 JMYQ8N9B5 988 aa14.87□□□□□ -0.03
CPNE1-222ENST00000473373 LAMB2P55268 1798 aa14.86□□□□□ -0.03
CPNE1-222ENST00000473373 ALDH1B1P30837 517 aa14.86□□□□□ -0.03
CPNE1-222ENST00000473373 CCDC30Q5VVM6 783 aa14.86□□□□□ -0.03
CPNE1-222ENST00000473373 SUSD4Q5VX71 490 aa14.86□□□□□ -0.03
CPNE1-222ENST00000473373 RIC3Q7Z5B4 369 aa14.86□□□□□ -0.03
CPNE1-222ENST00000473373 WWC1Q8IX03 1113 aa14.86□□□□□ -0.03
CPNE1-222ENST00000473373 TSR2Q969E8 191 aaKnown RBP14.86□□□□□ -0.03
CPNE1-222ENST00000473373 UTP14AQ9BVJ6 771 aaKnown RBP14.86□□□□□ -0.03
CPNE1-222ENST00000473373 STK31Q9BXU1 1019 aa14.86□□□□□ -0.03
CPNE1-222ENST00000473373 TMX4Q9H1E5 349 aaPredicted RBP14.86□□□□□ -0.03
CPNE1-222ENST00000473373 UBN2Q6ZU65 1347 aa14.86□□□□□ -0.03
CPNE1-222ENST00000473373 ZNF853P0CG23 659 aa14.85□□□□□ -0.03
CPNE1-222ENST00000473373 LMNB1P20700 586 aa14.85□□□□□ -0.03
CPNE1-222ENST00000473373 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
CPNE1-222ENST00000473373 ANKRD13DQ6ZTN6 518 aa14.85□□□□□ -0.03
CPNE1-222ENST00000473373 ZNF34Q8IZ26 560 aa14.85□□□□□ -0.03
CPNE1-222ENST00000473373 SMC1BQ8NDV3 1235 aa14.85□□□□□ -0.03
CPNE1-222ENST00000473373 ZNF428Q96B54 188 aa14.85□□□□□ -0.03
CPNE1-222ENST00000473373 ABCC12Q96J65 1359 aa14.85□□□□□ -0.03
CPNE1-222ENST00000473373 IBTKQ9P2D0 1353 aaPredicted RBP14.85□□□□□ -0.03
CPNE1-222ENST00000473373 PRELPP51888 382 aa14.84□□□□□ -0.03
CPNE1-222ENST00000473373 PLBD2Q8NHP8 589 aa14.84□□□□□ -0.03
CPNE1-222ENST00000473373 NLRP3Q96P20 1036 aa14.84□□□□□ -0.03
CPNE1-222ENST00000473373 TAOK3Q9H2K8 898 aa14.84□□□□□ -0.03
CPNE1-222ENST00000473373 TRMT112Q9UI30 125 aaKnown RBP14.84□□□□□ -0.03
CPNE1-222ENST00000473373 DDX58O95786 925 aaKnown RBP14.83□□□□□ -0.04
CPNE1-222ENST00000473373 TCIRG1Q13488 830 aa14.83□□□□□ -0.04
CPNE1-222ENST00000473373 CCDC93Q567U6 631 aa14.83□□□□□ -0.04
CPNE1-222ENST00000473373 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
CPNE1-222ENST00000473373 C8orf58Q8NAV2 365 aa14.83□□□□□ -0.04
CPNE1-222ENST00000473373 RBM17Q96I25 401 aaKnown RBP14.83□□□□□ -0.04
CPNE1-222ENST00000473373 TCERG1O14776 1098 aaKnown RBP14.82□□□□□ -0.04
CPNE1-222ENST00000473373 NTSR2O95665 410 aa14.82□□□□□ -0.04
CPNE1-222ENST00000473373 TWISTNBQ3B726 338 aaPredicted RBP14.82□□□□□ -0.04
CPNE1-222ENST00000473373 LRP10Q7Z4F1 713 aa14.82□□□□□ -0.04
CPNE1-222ENST00000473373 TNS4Q8IZW8 715 aa14.82□□□□□ -0.04
CPNE1-222ENST00000473373 TAF1P21675 1872 aa14.81□□□□□ -0.04
CPNE1-222ENST00000473373 GLTPD2A6NH11 291 aa14.81□□□□□ -0.04
CPNE1-222ENST00000473373 ATP5J2-PTCD1G3V325 749 aa14.81□□□□□ -0.04
CPNE1-222ENST00000473373 VEGFAP15692 232 aaPredicted RBP14.81□□□□□ -0.04
CPNE1-222ENST00000473373 NLRP10Q86W26 655 aa14.81□□□□□ -0.04
CPNE1-222ENST00000473373 PHAXQ9H814 394 aaKnown RBP14.81□□□□□ -0.04
CPNE1-222ENST00000473373 IL16Q14005 1332 aa14.81□□□□□ -0.04
CPNE1-222ENST00000473373 RNF123Q5XPI4 1314 aa14.81□□□□□ -0.04
CPNE1-222ENST00000473373 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
CPNE1-222ENST00000473373 NFKBIEO00221 500 aa14.8□□□□□ -0.04
CPNE1-222ENST00000473373 RTL5Q5HYW3 569 aaPredicted RBP14.8□□□□□ -0.04
CPNE1-222ENST00000473373 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
CPNE1-222ENST00000473373 WDR63Q8IWG1 891 aa14.8□□□□□ -0.04
CPNE1-222ENST00000473373 TSPYL6Q8N831 410 aa14.8□□□□□ -0.04
CPNE1-222ENST00000473373 SH3TC1Q8TE82 1336 aa14.8□□□□□ -0.04
CPNE1-222ENST00000473373 MYH3P11055 1940 aa14.8□□□□□ -0.04
CPNE1-222ENST00000473373 HCLS1P14317 486 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-222ENST00000473373 RTKN2Q8IZC4 609 aa14.79□□□□□ -0.04
CPNE1-222ENST00000473373 MYD88Q99836 296 aa14.79□□□□□ -0.04
CPNE1-222ENST00000473373 MYH16Q9H6N6 1097 aa14.79□□□□□ -0.04
CPNE1-222ENST00000473373 RIC1Q4ADV7 1423 aa14.78□□□□□ -0.04
CPNE1-222ENST00000473373 FANCIQ9NVI1 1328 aa14.78□□□□□ -0.04
CPNE1-222ENST00000473373 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
CPNE1-222ENST00000473373 PPEF1O14829 653 aaPredicted RBP14.78□□□□□ -0.04
CPNE1-222ENST00000473373 NEXNQ0ZGT2 675 aa14.78□□□□□ -0.04
CPNE1-222ENST00000473373 DDX46Q7L014 1031 aaKnown RBP14.78□□□□□ -0.04
CPNE1-222ENST00000473373 KLRG2A4D1S0 409 aaPredicted RBP14.77□□□□□ -0.05
CPNE1-222ENST00000473373 POTECB2RU33 542 aa14.77□□□□□ -0.05
CPNE1-222ENST00000473373 FKBP4Q02790 459 aaKnown RBP eCLIP14.77□□□□□ -0.05
CPNE1-222ENST00000473373 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
CPNE1-222ENST00000473373 LTBP3Q9NS15 1303 aa14.76□□□□□ -0.05
CPNE1-222ENST00000473373 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
CPNE1-222ENST00000473373 HSPA1AP0DMV8 641 aaKnown RBP14.76□□□□□ -0.05
CPNE1-222ENST00000473373 HSPA1BP0DMV9 641 aaKnown RBP14.76□□□□□ -0.05
CPNE1-222ENST00000473373 HSP90B1P14625 803 aaKnown RBP14.76□□□□□ -0.05
CPNE1-222ENST00000473373 EXOSC9Q06265 439 aaKnown RBP14.76□□□□□ -0.05
CPNE1-222ENST00000473373 CRY2Q49AN0 593 aa14.76□□□□□ -0.05
CPNE1-222ENST00000473373 OLFM4Q6UX06 510 aa14.76□□□□□ -0.05
CPNE1-222ENST00000473373 FAM89AQ96GI7 184 aa14.76□□□□□ -0.05
CPNE1-222ENST00000473373 CRAMP1Q96RY5 1269 aa14.76□□□□□ -0.05
CPNE1-222ENST00000473373 ZNF277Q9NRM2 450 aaPredicted RBP14.76□□□□□ -0.05
CPNE1-222ENST00000473373 MAP3K2Q9Y2U5 619 aa14.76□□□□□ -0.05
CPNE1-222ENST00000473373 SPEF2Q9C093 1822 aa14.76□□□□□ -0.05
CPNE1-222ENST00000473373 CC2D2BQ6DHV5 1058 aa14.75□□□□□ -0.05
CPNE1-222ENST00000473373 SYNE4Q8N205 404 aa14.75□□□□□ -0.05
CPNE1-222ENST00000473373 JDP2Q8WYK2 163 aa14.75□□□□□ -0.05
CPNE1-222ENST00000473373 IRS4O14654 1257 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-222ENST00000473373 FKBP5Q13451 457 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-222ENST00000473373 SLC10A5Q5PT55 438 aa14.74□□□□□ -0.05
CPNE1-222ENST00000473373 C3orf67Q6ZVT6 689 aa14.74□□□□□ -0.05
CPNE1-222ENST00000473373 ISCA1Q9BUE6 129 aa14.74□□□□□ -0.05
CPNE1-222ENST00000473373 CWC25Q9NXE8 425 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-222ENST00000473373 ABCC4O15439 1325 aa14.73□□□□□ -0.05
CPNE1-222ENST00000473373 PI4KAP2A4QPH2 592 aa14.73□□□□□ -0.05
CPNE1-222ENST00000473373 HOXA10P31260 410 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-222ENST00000473373 IARSP41252 1262 aaKnown RBP14.73□□□□□ -0.05
CPNE1-222ENST00000473373 GRIPAP1Q4V328 841 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms