RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	WDR33	Q9C0J8	1336 aa	Known RBP	12.88	□□□□□ -0.35
MCF2L-223	ENST00000473345	TCERG1	O14776	1098 aa	Known RBP	12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	RGL2	O15211	777 aa		12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	HOXA10	P31260	410 aa	Predicted RBP	12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	EIF4A1	P60842	406 aa	Known RBP	12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	TAF7	Q15545	349 aa	Predicted RBP	12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	DEFB115	Q30KQ5	88 aa		12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	GPC2	Q8N158	579 aa		12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	PLEKHF1	Q96S99	279 aa		12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	MAP3K15	Q6ZN16	1313 aa		12.87	□□□□□ -0.35
MCF2L-223	ENST00000473345	NTSR2	O95665	410 aa		12.86	□□□□□ -0.35
MCF2L-223	ENST00000473345	NPM2	Q86SE8	214 aa	Known RBP	12.86	□□□□□ -0.35
MCF2L-223	ENST00000473345	ZNF34	Q8IZ26	560 aa		12.86	□□□□□ -0.35
MCF2L-223	ENST00000473345	ZBTB3	Q9H5J0	574 aa		12.86	□□□□□ -0.35
MCF2L-223	ENST00000473345	GJA3	Q9Y6H8	435 aa		12.86	□□□□□ -0.35
MCF2L-223	ENST00000473345	NUP98	P52948	1817 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	SHTN1	A0MZ66	631 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	MYL6B	P14649	208 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	ALDH1B1	P30837	517 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	PROSER3	Q2NL68	480 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	CYP4F22	Q6NT55	531 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	DLK2	Q6UY11	383 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	RTF1	Q92541	710 aa	Known RBP	12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	ABHD8	Q96I13	439 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	TSKS	Q9UJT2	592 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	RRP7A	Q9Y3A4	280 aa	Known RBP	12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	COL4A1	P02462	1669 aa		12.85	□□□□□ -0.35
MCF2L-223	ENST00000473345	ERVV-1	B6SEH8	477 aa		12.84	□□□□□ -0.35
MCF2L-223	ENST00000473345	HTATSF1	O43719	755 aa	Known RBP	12.84	□□□□□ -0.35
MCF2L-223	ENST00000473345	AOC2	O75106	756 aa		12.84	□□□□□ -0.35
MCF2L-223	ENST00000473345	ANXA1	P04083	346 aa		12.84	□□□□□ -0.35
MCF2L-223	ENST00000473345	PDIA6	Q15084	440 aa		12.84	□□□□□ -0.35
MCF2L-223	ENST00000473345	PNMA8A	Q86V59	439 aa	Predicted RBP	12.84	□□□□□ -0.35
MCF2L-223	ENST00000473345	DLG5	Q8TDM6	1919 aa		12.84	□□□□□ -0.35
MCF2L-223	ENST00000473345	AOC3	Q16853	763 aa		12.83	□□□□□ -0.36
MCF2L-223	ENST00000473345	ZNF428	Q96B54	188 aa		12.83	□□□□□ -0.36
MCF2L-223	ENST00000473345	CFAP53	Q96M91	514 aa		12.83	□□□□□ -0.36
MCF2L-223	ENST00000473345	ABT1	Q9ULW3	272 aa	Known RBP	12.83	□□□□□ -0.36
MCF2L-223	ENST00000473345	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	PPEF1	O14829	653 aa	Predicted RBP	12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	GTF2E1	P29083	439 aa	Predicted RBP	12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	HIRA	P54198	1017 aa	Predicted RBP	12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	FAM161A	Q3B820	660 aa		12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	LARGE2	Q8N3Y3	721 aa		12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	AIDA	Q96BJ3	306 aa		12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	CAPNS2	Q96L46	248 aa		12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	CRAMP1	Q96RY5	1269 aa		12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	ZIC5	Q96T25	663 aa		12.82	□□□□□ -0.36
MCF2L-223	ENST00000473345	CXCL9	Q07325	125 aa		12.81	□□□□□ -0.36
MCF2L-223	ENST00000473345	JDP2	Q8WYK2	163 aa		12.81	□□□□□ -0.36
MCF2L-223	ENST00000473345	RPGR	Q92834	1020 aa	Known RBP	12.81	□□□□□ -0.36
MCF2L-223	ENST00000473345	NUDC	Q9Y266	331 aa		12.81	□□□□□ -0.36
MCF2L-223	ENST00000473345	ABCC4	O15439	1325 aa		12.81	□□□□□ -0.36
MCF2L-223	ENST00000473345	DUOX1	Q9NRD9	1551 aa		12.81	□□□□□ -0.36
MCF2L-223	ENST00000473345	YDJC	A8MPS7	323 aa		12.8	□□□□□ -0.36
MCF2L-223	ENST00000473345	EIF6	P56537	245 aa	Known RBP	12.8	□□□□□ -0.36
MCF2L-223	ENST00000473345	GRM1	Q13255	1194 aa		12.8	□□□□□ -0.36
MCF2L-223	ENST00000473345	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.8	□□□□□ -0.36
MCF2L-223	ENST00000473345	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.8	□□□□□ -0.36
MCF2L-223	ENST00000473345	NYX	Q9GZU5	481 aa		12.8	□□□□□ -0.36
MCF2L-223	ENST00000473345	GPRC5D	Q9NZD1	345 aa		12.8	□□□□□ -0.36
MCF2L-223	ENST00000473345	TLL2	Q9Y6L7	1015 aa		12.8	□□□□□ -0.36
MCF2L-223	ENST00000473345	LAMB2	P55268	1798 aa		12.79	□□□□□ -0.36
MCF2L-223	ENST00000473345	PPIP5K2	O43314	1243 aa		12.79	□□□□□ -0.36
MCF2L-223	ENST00000473345	NFE2L2	Q16236	605 aa		12.79	□□□□□ -0.36
MCF2L-223	ENST00000473345	CC2D2B	Q6DHV5	1058 aa		12.79	□□□□□ -0.36
MCF2L-223	ENST00000473345	TRPM4	Q8TD43	1214 aa		12.79	□□□□□ -0.36
MCF2L-223	ENST00000473345	GPR101	Q96P66	508 aa	Predicted RBP	12.79	□□□□□ -0.36
MCF2L-223	ENST00000473345	SLC34A2	O95436	690 aa		12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	HCLS1	P14317	486 aa	Predicted RBP	12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	GMPS	P49915	693 aa	Predicted RBP	12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	MAP2K1	Q02750	393 aa	Predicted RBP	12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	KRT24	Q2M2I5	525 aa		12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	SLC10A5	Q5PT55	438 aa		12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	USP50	Q70EL3	339 aa	Predicted RBP	12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	SAPCD2	Q86UD0	394 aa		12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	NIM1K	Q8IY84	436 aa		12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	RBM17	Q96I25	401 aa	Known RBP	12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	ATP6V0A2	Q9Y487	856 aa		12.78	□□□□□ -0.36
MCF2L-223	ENST00000473345	TAF1	P21675	1872 aa		12.77	□□□□□ -0.37
MCF2L-223	ENST00000473345	RAD17	O75943	681 aa		12.77	□□□□□ -0.37
MCF2L-223	ENST00000473345	EGFR	P00533	1210 aa		12.77	□□□□□ -0.37
MCF2L-223	ENST00000473345	LMOD1	P29536	600 aa	Predicted RBP	12.77	□□□□□ -0.37
MCF2L-223	ENST00000473345	KIF6	Q6ZMV9	814 aa		12.77	□□□□□ -0.37
MCF2L-223	ENST00000473345	PGAP2	Q9UHJ9	254 aa		12.77	□□□□□ -0.37
MCF2L-223	ENST00000473345	CELF2	O95319	508 aa	Known RBP	12.76	□□□□□ -0.37
MCF2L-223	ENST00000473345	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.76	□□□□□ -0.37
MCF2L-223	ENST00000473345	NECTIN2	Q92692	538 aa		12.76	□□□□□ -0.37
MCF2L-223	ENST00000473345	ADARB2	Q9NS39	739 aa	Known RBP	12.76	□□□□□ -0.37
MCF2L-223	ENST00000473345	TRPM7	Q96QT4	1865 aa		12.76	□□□□□ -0.37
MCF2L-223	ENST00000473345	EIF2S2	P20042	333 aa	Known RBP	12.75	□□□□□ -0.37
MCF2L-223	ENST00000473345	NLRP10	Q86W26	655 aa		12.75	□□□□□ -0.37
MCF2L-223	ENST00000473345	KCNQ5	Q9NR82	932 aa		12.75	□□□□□ -0.37
MCF2L-223	ENST00000473345	ZNRF3	Q9ULT6	936 aa		12.75	□□□□□ -0.37
MCF2L-223	ENST00000473345	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.75	□□□□□ -0.37
MCF2L-223	ENST00000473345	CCDC85C	A6NKD9	419 aa		12.74	□□□□□ -0.37
MCF2L-223	ENST00000473345	RGS19	P49795	217 aa		12.74	□□□□□ -0.37
MCF2L-223	ENST00000473345	KIAA2012	Q0VF49	1180 aa		12.74	□□□□□ -0.37

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