RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
SMC4-214ENST00000472991 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
SMC4-214ENST00000472991 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
SMC4-214ENST00000472991 BABAM1Q9NWV8 329 aa11.84□□□□□ -0.51
SMC4-214ENST00000472991 CACNA1FO60840 1977 aa11.84□□□□□ -0.51
SMC4-214ENST00000472991 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
SMC4-214ENST00000472991 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
SMC4-214ENST00000472991 GNAI1P63096 354 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 R3HDM1Q15032 1099 aaKnown RBP11.83□□□□□ -0.52
SMC4-214ENST00000472991 NGEFQ8N5V2 710 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 AK7Q96M32 723 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 IFT57Q9NWB7 429 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 PCDHGA10Q9Y5H3 936 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 CNTNAP4Q9C0A0 1308 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
SMC4-214ENST00000472991 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
SMC4-214ENST00000472991 ZNF853P0CG23 659 aa11.82□□□□□ -0.52
SMC4-214ENST00000472991 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
SMC4-214ENST00000472991 IL16Q14005 1332 aa11.82□□□□□ -0.52
SMC4-214ENST00000472991 ZNF521Q96K83 1311 aa11.82□□□□□ -0.52
SMC4-214ENST00000472991 DPYSL4O14531 572 aa11.81□□□□□ -0.52
SMC4-214ENST00000472991 GNPATO15228 680 aa11.81□□□□□ -0.52
SMC4-214ENST00000472991 SNRPA1P09661 255 aaKnown RBP11.81□□□□□ -0.52
SMC4-214ENST00000472991 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
SMC4-214ENST00000472991 HMGB2P26583 209 aaKnown RBP11.81□□□□□ -0.52
SMC4-214ENST00000472991 WDR63Q8IWG1 891 aa11.81□□□□□ -0.52
SMC4-214ENST00000472991 TSR2Q969E8 191 aaKnown RBP11.81□□□□□ -0.52
SMC4-214ENST00000472991 ZBED2Q9BTP6 218 aa11.81□□□□□ -0.52
SMC4-214ENST00000472991 TFCP2L1Q9NZI6 479 aa11.81□□□□□ -0.52
SMC4-214ENST00000472991 PNPLA7Q6ZV29 1317 aa11.81□□□□□ -0.52
SMC4-214ENST00000472991 NUP98P52948 1817 aa11.81□□□□□ -0.52
SMC4-214ENST00000472991 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.522e-22■■■■■ 68.1
SMC4-214ENST00000472991 KRT24Q2M2I5 525 aa11.8□□□□□ -0.52
SMC4-214ENST00000472991 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
SMC4-214ENST00000472991 PAXIP1Q6ZW49 1069 aaPredicted RBP11.8□□□□□ -0.52
SMC4-214ENST00000472991 AMIGO3Q86WK7 504 aa11.8□□□□□ -0.52
SMC4-214ENST00000472991 TEX13AQ9BXU3 409 aaPredicted RBP11.8□□□□□ -0.52
SMC4-214ENST00000472991 CCDC87Q9NVE4 849 aa11.8□□□□□ -0.52
SMC4-214ENST00000472991 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
SMC4-214ENST00000472991 USP16Q9Y5T5 823 aa11.8□□□□□ -0.52
SMC4-214ENST00000472991 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
SMC4-214ENST00000472991 PHF14O94880 888 aa11.79□□□□□ -0.52
SMC4-214ENST00000472991 STARD3NLO95772 234 aa11.79□□□□□ -0.52
SMC4-214ENST00000472991 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
SMC4-214ENST00000472991 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
SMC4-214ENST00000472991 HCSTQ9UBK5 93 aa11.79□□□□□ -0.52
SMC4-214ENST00000472991 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
SMC4-214ENST00000472991 ANKRD36CQ5JPF3 1778 aa11.79□□□□□ -0.52
SMC4-214ENST00000472991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
SMC4-214ENST00000472991 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
SMC4-214ENST00000472991 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
SMC4-214ENST00000472991 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
SMC4-214ENST00000472991 COL15A1P39059 1388 aa11.78□□□□□ -0.52
SMC4-214ENST00000472991 BHMG1C9JSJ3 638 aaPredicted RBP11.77□□□□□ -0.53
SMC4-214ENST00000472991 A1BGP04217 495 aa11.77□□□□□ -0.53
SMC4-214ENST00000472991 CANXP27824 592 aaKnown RBP11.77□□□□□ -0.53
SMC4-214ENST00000472991 SSFA2P28290 1259 aa11.77□□□□□ -0.53
SMC4-214ENST00000472991 PIP4K2AP48426 406 aaPredicted RBP11.77□□□□□ -0.53
SMC4-214ENST00000472991 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
SMC4-214ENST00000472991 COL23A1Q86Y22 540 aaPredicted RBP11.77□□□□□ -0.53
SMC4-214ENST00000472991 LRP5O75197 1615 aa11.77□□□□□ -0.53
SMC4-214ENST00000472991 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.53
SMC4-214ENST00000472991 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.53
SMC4-214ENST00000472991 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
SMC4-214ENST00000472991 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
SMC4-214ENST00000472991 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
SMC4-214ENST00000472991 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
SMC4-214ENST00000472991 C8orf58Q8NAV2 365 aa11.76□□□□□ -0.53
SMC4-214ENST00000472991 FLAD1Q8NFF5 587 aa11.76□□□□□ -0.53
SMC4-214ENST00000472991 NECTIN2Q92692 538 aa11.76□□□□□ -0.53
SMC4-214ENST00000472991 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
SMC4-214ENST00000472991 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
SMC4-214ENST00000472991 ZNF330Q9Y3S2 320 aaPredicted RBP11.76□□□□□ -0.53
SMC4-214ENST00000472991 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
SMC4-214ENST00000472991 HOXB7P09629 217 aa11.75□□□□□ -0.53
SMC4-214ENST00000472991 NBPF10Q6P3W6 841 aaKnown RBP11.75□□□□□ -0.53
SMC4-214ENST00000472991 NBPF15Q8N660 670 aa11.75□□□□□ -0.53
SMC4-214ENST00000472991 KCTD12Q96CX2 325 aaKnown RBP11.75□□□□□ -0.53
SMC4-214ENST00000472991 CDCA7LQ96GN5 454 aa11.75□□□□□ -0.53
SMC4-214ENST00000472991 PPP1R3GB7ZBB8 358 aa11.74□□□□□ -0.53
SMC4-214ENST00000472991 E9PSI1 815 aa11.74□□□□□ -0.53
SMC4-214ENST00000472991 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
SMC4-214ENST00000472991 EXOSC9Q06265 439 aaKnown RBP11.74□□□□□ -0.53
SMC4-214ENST00000472991 SLFN5Q08AF3 891 aa11.74□□□□□ -0.53
SMC4-214ENST00000472991 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
SMC4-214ENST00000472991 HDGFL1Q5TGJ6 251 aa11.74□□□□□ -0.53
SMC4-214ENST00000472991 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
SMC4-214ENST00000472991 ARHGEF1Q92888 912 aaKnown RBP11.74□□□□□ -0.53
SMC4-214ENST00000472991 ZBED9Q6R2W3 1325 aa11.74□□□□□ -0.53
SMC4-214ENST00000472991 ZBTB7AO95365 584 aa11.73□□□□□ -0.53
SMC4-214ENST00000472991 ANXA1P04083 346 aa11.73□□□□□ -0.53
SMC4-214ENST00000472991 MYL6BP14649 208 aa11.73□□□□□ -0.53
SMC4-214ENST00000472991 RFC4P35249 363 aa11.73□□□□□ -0.53
SMC4-214ENST00000472991 EIF5P55010 431 aaKnown RBP11.73□□□□□ -0.53
SMC4-214ENST00000472991 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
SMC4-214ENST00000472991 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
SMC4-214ENST00000472991 USP42Q9H9J4 1324 aaKnown RBP11.73□□□□□ -0.53
SMC4-214ENST00000472991 COL9A1P20849 921 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms