RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 RNF181Q9P0P0 153 aa16.25■□□□□ 0.19
PPP1R3F-204ENST00000471261 ADCY9O60503 1353 aa16.25■□□□□ 0.19
PPP1R3F-204ENST00000471261 ATP5J2-PTCD1G3V325 749 aa16.24■□□□□ 0.19
PPP1R3F-204ENST00000471261 RPGRQ92834 1020 aaKnown RBP16.24■□□□□ 0.19
PPP1R3F-204ENST00000471261 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
PPP1R3F-204ENST00000471261 GPBP1L1Q9HC44 474 aaPredicted RBP16.24■□□□□ 0.19
PPP1R3F-204ENST00000471261 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
PPP1R3F-204ENST00000471261 CCER2I3L3R5 266 aa16.23■□□□□ 0.19
PPP1R3F-204ENST00000471261 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
PPP1R3F-204ENST00000471261 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
PPP1R3F-204ENST00000471261 HCLS1P14317 486 aaPredicted RBP16.22■□□□□ 0.19
PPP1R3F-204ENST00000471261 ALDH1B1P30837 517 aa16.22■□□□□ 0.19
PPP1R3F-204ENST00000471261 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
PPP1R3F-204ENST00000471261 CRY2Q49AN0 593 aa16.22■□□□□ 0.19
PPP1R3F-204ENST00000471261 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
PPP1R3F-204ENST00000471261 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
PPP1R3F-204ENST00000471261 SH3TC1Q8TE82 1336 aa16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 NFKBIEO00221 500 aa16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 LMNB1P20700 586 aa16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 SOGA3Q5TF21 947 aa16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 SYNE4Q8N205 404 aa16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 MYD88Q99836 296 aa16.21■□□□□ 0.19
PPP1R3F-204ENST00000471261 TNRC6CQ9HCJ0 1690 aaKnown RBP16.21■□□□□ 0.18
PPP1R3F-204ENST00000471261 RNF123Q5XPI4 1314 aa16.2■□□□□ 0.18
PPP1R3F-204ENST00000471261 OLFM4Q6UX06 510 aa16.2■□□□□ 0.18
PPP1R3F-204ENST00000471261 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
PPP1R3F-204ENST00000471261 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
PPP1R3F-204ENST00000471261 TAOK3Q9H2K8 898 aa16.2■□□□□ 0.18
PPP1R3F-204ENST00000471261 RIC1Q4ADV7 1423 aa16.19■□□□□ 0.18
PPP1R3F-204ENST00000471261 CCDC93Q567U6 631 aa16.19■□□□□ 0.18
PPP1R3F-204ENST00000471261 SLC10A5Q5PT55 438 aa16.19■□□□□ 0.18
PPP1R3F-204ENST00000471261 FAM89AQ96GI7 184 aa16.19■□□□□ 0.18
PPP1R3F-204ENST00000471261 SLX4Q8IY92 1834 aa16.19■□□□□ 0.18
PPP1R3F-204ENST00000471261 PI4KAP2A4QPH2 592 aa16.18■□□□□ 0.18
PPP1R3F-204ENST00000471261 VAMP4O75379 141 aa16.18■□□□□ 0.18
PPP1R3F-204ENST00000471261 PRELPP51888 382 aa16.18■□□□□ 0.18
PPP1R3F-204ENST00000471261 G2E3Q7L622 706 aa16.18■□□□□ 0.18
PPP1R3F-204ENST00000471261 PI4KAP1Q8N8J0 262 aa16.18■□□□□ 0.18
PPP1R3F-204ENST00000471261 C7orf43Q8WVR3 580 aa16.18■□□□□ 0.18
PPP1R3F-204ENST00000471261 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
PPP1R3F-204ENST00000471261 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
PPP1R3F-204ENST00000471261 HOXA10P31260 410 aaPredicted RBP16.17■□□□□ 0.18
PPP1R3F-204ENST00000471261 KSR2Q6VAB6 950 aa16.17■□□□□ 0.18
PPP1R3F-204ENST00000471261 MIER1Q8N108 512 aa16.17■□□□□ 0.18
PPP1R3F-204ENST00000471261 METTL22Q9BUU2 404 aaPredicted RBP16.17■□□□□ 0.18
PPP1R3F-204ENST00000471261 ANKRD36CQ5JPF3 1778 aa16.17■□□□□ 0.18
PPP1R3F-204ENST00000471261 CACNA1SQ13698 1873 aa16.16■□□□□ 0.18
PPP1R3F-204ENST00000471261 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
PPP1R3F-204ENST00000471261 TRIM28Q13263 835 aaKnown RBP16.16■□□□□ 0.18
PPP1R3F-204ENST00000471261 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
PPP1R3F-204ENST00000471261 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
PPP1R3F-204ENST00000471261 NEXNQ0ZGT2 675 aa16.15■□□□□ 0.18
PPP1R3F-204ENST00000471261 FLIIQ13045 1269 aa16.15■□□□□ 0.18
PPP1R3F-204ENST00000471261 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
PPP1R3F-204ENST00000471261 CWC25Q9NXE8 425 aaPredicted RBP16.15■□□□□ 0.18
PPP1R3F-204ENST00000471261 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
PPP1R3F-204ENST00000471261 LTBP3Q9NS15 1303 aa16.15■□□□□ 0.18
PPP1R3F-204ENST00000471261 E9PSI1 815 aa16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 IRS4O14654 1257 aaPredicted RBP16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 ZBTB38Q8NAP3 1195 aaPredicted RBP16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 ZNF277Q9NRM2 450 aaPredicted RBP16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 ABCC4O15439 1325 aa16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 KDM2BQ8NHM5 1336 aa16.14■□□□□ 0.17
PPP1R3F-204ENST00000471261 C1QTNF8P60827 252 aa16.13■□□□□ 0.17
PPP1R3F-204ENST00000471261 FKBP4Q02790 459 aaKnown RBP eCLIP16.13■□□□□ 0.17
PPP1R3F-204ENST00000471261 SLC51AQ86UW1 340 aa16.13■□□□□ 0.17
PPP1R3F-204ENST00000471261 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
PPP1R3F-204ENST00000471261 NMRK2Q9NPI5 230 aa16.13■□□□□ 0.17
PPP1R3F-204ENST00000471261 ZC3H4Q9UPT8 1303 aaKnown RBP16.13■□□□□ 0.17
PPP1R3F-204ENST00000471261 SBF1O95248 1867 aa16.12■□□□□ 0.17
PPP1R3F-204ENST00000471261 CWF19L2Q2TBE0 894 aaKnown RBP16.12■□□□□ 0.17
PPP1R3F-204ENST00000471261 PCCAP05165 728 aaPredicted RBP16.11■□□□□ 0.17
PPP1R3F-204ENST00000471261 IGKV5-2P06315 115 aa16.11■□□□□ 0.17
PPP1R3F-204ENST00000471261 HSP90B1P14625 803 aaKnown RBP16.11■□□□□ 0.17
PPP1R3F-204ENST00000471261 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
PPP1R3F-204ENST00000471261 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
PPP1R3F-204ENST00000471261 FER1L6Q2WGJ9 1857 aa16.11■□□□□ 0.17
PPP1R3F-204ENST00000471261 KIF3CO14782 793 aa16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 BBOX1O75936 387 aa16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 SLFN5Q08AF3 891 aa16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 GRAPQ13588 217 aa16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 DPY19L2Q6NUT2 758 aa16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 RRAGCQ9HB90 399 aa16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
PPP1R3F-204ENST00000471261 GLTPD2A6NH11 291 aa16.09■□□□□ 0.17
PPP1R3F-204ENST00000471261 NEURL1BA8MQ27 555 aa16.09■□□□□ 0.17
PPP1R3F-204ENST00000471261 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
PPP1R3F-204ENST00000471261 SF3B3Q15393 1217 aaKnown RBP16.09■□□□□ 0.17
PPP1R3F-204ENST00000471261 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
PPP1R3F-204ENST00000471261 C16orf71Q8IYS4 520 aaPredicted RBP16.09■□□□□ 0.17
PPP1R3F-204ENST00000471261 PSMD1Q99460 953 aa16.09■□□□□ 0.17
PPP1R3F-204ENST00000471261 F6X3S4 739 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms