RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 PI4KAP2A4QPH2 592 aa25.28■■□□□ 1.64
HDAC7-220ENST00000471235 ATP5J2-PTCD1G3V325 749 aa25.28■■□□□ 1.64
HDAC7-220ENST00000471235 PDE6BP35913 854 aa25.28■■□□□ 1.64
HDAC7-220ENST00000471235 GPR162Q16538 588 aa25.28■■□□□ 1.64
HDAC7-220ENST00000471235 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
HDAC7-220ENST00000471235 PI4KAP1Q8N8J0 262 aa25.28■■□□□ 1.64
HDAC7-220ENST00000471235 MYD88Q99836 296 aa25.28■■□□□ 1.64
HDAC7-220ENST00000471235 DCAF8L1A6NGE4 600 aa25.27■■□□□ 1.64
HDAC7-220ENST00000471235 GTF2E1P29083 439 aaPredicted RBP25.27■■□□□ 1.64
HDAC7-220ENST00000471235 FKBP5Q13451 457 aaPredicted RBP25.27■■□□□ 1.64
HDAC7-220ENST00000471235 METTL22Q9BUU2 404 aaPredicted RBP25.27■■□□□ 1.64
HDAC7-220ENST00000471235 UTP14AQ9BVJ6 771 aaKnown RBP25.27■■□□□ 1.64
HDAC7-220ENST00000471235 RNF123Q5XPI4 1314 aa25.27■■□□□ 1.64
HDAC7-220ENST00000471235 ZNF428Q96B54 188 aa25.26■■□□□ 1.63
HDAC7-220ENST00000471235 TAF1P21675 1872 aa25.26■■□□□ 1.63
HDAC7-220ENST00000471235 CT47B1P0C2W7 299 aaPredicted RBP25.25■■□□□ 1.63
HDAC7-220ENST00000471235 PDZRN3Q9UPQ7 1066 aa25.25■■□□□ 1.63
HDAC7-220ENST00000471235 H0YIN7 160 aa25.24■■□□□ 1.63
HDAC7-220ENST00000471235 TRIM28Q13263 835 aaKnown RBP25.24■■□□□ 1.63
HDAC7-220ENST00000471235 MRPL50Q8N5N7 158 aaKnown RBP25.24■■□□□ 1.63
HDAC7-220ENST00000471235 SSH1Q8WYL5 1049 aa25.24■■□□□ 1.63
HDAC7-220ENST00000471235 PIM2Q9P1W9 311 aa25.24■■□□□ 1.63
HDAC7-220ENST00000471235 GOLGB1Q14789 3259 aaKnown RBP25.24■■□□□ 1.63
HDAC7-220ENST00000471235 BCL2L13Q9BXK5 485 aa25.23■■□□□ 1.63
HDAC7-220ENST00000471235 FER1L6Q2WGJ9 1857 aa25.23■■□□□ 1.63
HDAC7-220ENST00000471235 CCDC88AQ3V6T2 1871 aa25.23■■□□□ 1.63
HDAC7-220ENST00000471235 SBF1O95248 1867 aa25.22■■□□□ 1.63
HDAC7-220ENST00000471235 SH3TC1Q8TE82 1336 aa25.22■■□□□ 1.63
HDAC7-220ENST00000471235 KLRG2A4D1S0 409 aaPredicted RBP25.22■■□□□ 1.63
HDAC7-220ENST00000471235 SRGNP10124 158 aa25.22■■□□□ 1.63
HDAC7-220ENST00000471235 ALDH1L2Q3SY69 923 aa25.22■■□□□ 1.63
HDAC7-220ENST00000471235 TRMT112Q9UI30 125 aaKnown RBP25.22■■□□□ 1.63
HDAC7-220ENST00000471235 BCS1LQ9Y276 419 aa25.22■■□□□ 1.63
HDAC7-220ENST00000471235 IGKV5-2P06315 115 aa25.21■■□□□ 1.63
HDAC7-220ENST00000471235 SYNE4Q8N205 404 aa25.21■■□□□ 1.63
HDAC7-220ENST00000471235 DNAAF4Q8WXU2 420 aa25.21■■□□□ 1.63
HDAC7-220ENST00000471235 NEXNQ0ZGT2 675 aa25.2■■□□□ 1.62
HDAC7-220ENST00000471235 DALRD3Q5D0E6 543 aaKnown RBP25.2■■□□□ 1.62
HDAC7-220ENST00000471235 CCDC191Q8NCU4 936 aa25.2■■□□□ 1.62
HDAC7-220ENST00000471235 SMC4Q9NTJ3 1288 aa25.2■■□□□ 1.62
HDAC7-220ENST00000471235 F6X3S4 739 aa25.19■■□□□ 1.62
HDAC7-220ENST00000471235 SLC10A5Q5PT55 438 aa25.19■■□□□ 1.62
HDAC7-220ENST00000471235 STYK1Q6J9G0 422 aa25.19■■□□□ 1.62
HDAC7-220ENST00000471235 C3orf67Q6ZVT6 689 aa25.19■■□□□ 1.62
HDAC7-220ENST00000471235 ZNF622Q969S3 477 aaKnown RBP eCLIP25.19■■□□□ 1.62
HDAC7-220ENST00000471235 MASTLQ96GX5 879 aa25.19■■□□□ 1.62
HDAC7-220ENST00000471235 CWC25Q9NXE8 425 aaPredicted RBP25.19■■□□□ 1.62
HDAC7-220ENST00000471235 CWF19L2Q2TBE0 894 aaKnown RBP25.18■■□□□ 1.62
HDAC7-220ENST00000471235 CRY2Q49AN0 593 aa25.18■■□□□ 1.62
HDAC7-220ENST00000471235 FAM89AQ96GI7 184 aa25.18■■□□□ 1.62
HDAC7-220ENST00000471235 SPEF2Q9C093 1822 aa25.18■■□□□ 1.62
HDAC7-220ENST00000471235 NEURL1BA8MQ27 555 aa25.17■■□□□ 1.62
HDAC7-220ENST00000471235 GRIN3BO60391 1043 aa25.17■■□□□ 1.62
HDAC7-220ENST00000471235 HCLS1P14317 486 aaPredicted RBP25.17■■□□□ 1.62
HDAC7-220ENST00000471235 NPR1P16066 1061 aa25.17■■□□□ 1.62
HDAC7-220ENST00000471235 TTLL6Q8N841 843 aa25.17■■□□□ 1.62
HDAC7-220ENST00000471235 ZBTB38Q8NAP3 1195 aaPredicted RBP25.16■■□□□ 1.62
HDAC7-220ENST00000471235 PTPRCP08575 1304 aa25.15■■□□□ 1.62
HDAC7-220ENST00000471235 PCCAP05165 728 aaPredicted RBP25.15■■□□□ 1.62
HDAC7-220ENST00000471235 RARSP54136 660 aaKnown RBP25.15■■□□□ 1.62
HDAC7-220ENST00000471235 RTL5Q5HYW3 569 aaPredicted RBP25.15■■□□□ 1.62
HDAC7-220ENST00000471235 LRRC37AA6NMS7 1700 aa25.15■■□□□ 1.62
HDAC7-220ENST00000471235 COL4A1P02462 1669 aa25.14■■□□□ 1.62
HDAC7-220ENST00000471235 LINS1Q8NG48 757 aa25.14■■□□□ 1.62
HDAC7-220ENST00000471235 CNKSR1Q969H4 720 aa25.14■■□□□ 1.62
HDAC7-220ENST00000471235 NLRP3Q96P20 1036 aa25.14■■□□□ 1.62
HDAC7-220ENST00000471235 DICER1Q9UPY3 1922 aaKnown RBP25.14■■□□□ 1.61
HDAC7-220ENST00000471235 PRPF40BQ6NWY9 871 aaKnown RBP25.13■■□□□ 1.61
HDAC7-220ENST00000471235 IRS4O14654 1257 aaPredicted RBP25.12■■□□□ 1.61
HDAC7-220ENST00000471235 BRPF1P55201 1214 aaPredicted RBP25.12■■□□□ 1.61
HDAC7-220ENST00000471235 BEND3Q5T5X7 828 aa25.12■■□□□ 1.61
HDAC7-220ENST00000471235 JARID2Q92833 1246 aaPredicted RBP25.12■■□□□ 1.61
HDAC7-220ENST00000471235 RPGRQ92834 1020 aaKnown RBP25.12■■□□□ 1.61
HDAC7-220ENST00000471235 UTRNP46939 3433 aa25.12■■□□□ 1.61
HDAC7-220ENST00000471235 TIAM2Q8IVF5 1701 aa25.12■■□□□ 1.61
HDAC7-220ENST00000471235 CDHR2Q9BYE9 1310 aa25.12■■□□□ 1.61
HDAC7-220ENST00000471235 HOXA10P31260 410 aaPredicted RBP25.11■■□□□ 1.61
HDAC7-220ENST00000471235 GCKRQ14397 625 aa25.11■■□□□ 1.61
HDAC7-220ENST00000471235 SLC4A10Q6U841 1118 aa25.09■■□□□ 1.61
HDAC7-220ENST00000471235 KIF16BQ96L93 1317 aa25.09■■□□□ 1.61
HDAC7-220ENST00000471235 UBE3BQ7Z3V4 1068 aa25.08■■□□□ 1.61
HDAC7-220ENST00000471235 RBM17Q96I25 401 aaKnown RBP25.08■■□□□ 1.61
HDAC7-220ENST00000471235 ZNF219Q9P2Y4 722 aaPredicted RBP25.08■■□□□ 1.61
HDAC7-220ENST00000471235 ABCC4O15439 1325 aa25.08■■□□□ 1.6
HDAC7-220ENST00000471235 H7C1W4 665 aa25.07■■□□□ 1.6
HDAC7-220ENST00000471235 C21orf2O43822 256 aa25.07■■□□□ 1.6
HDAC7-220ENST00000471235 ALDH1B1P30837 517 aa25.07■■□□□ 1.6
HDAC7-220ENST00000471235 ARHGAP27Q6ZUM4 889 aa25.07■■□□□ 1.6
HDAC7-220ENST00000471235 CRAMP1Q96RY5 1269 aa25.07■■□□□ 1.6
HDAC7-220ENST00000471235 NOB1Q9ULX3 412 aaKnown RBP25.07■■□□□ 1.6
HDAC7-220ENST00000471235 ALDH1L1O75891 902 aa25.06■■□□□ 1.6
HDAC7-220ENST00000471235 CASP7P55210 303 aa25.06■■□□□ 1.6
HDAC7-220ENST00000471235 SF3B3Q15393 1217 aaKnown RBP25.06■■□□□ 1.6
HDAC7-220ENST00000471235 SRCIN1Q9C0H9 1055 aa25.06■■□□□ 1.6
HDAC7-220ENST00000471235 SNED1Q8TER0 1413 aa25.05■■□□□ 1.6
HDAC7-220ENST00000471235 PDE8AO60658 829 aa25.05■■□□□ 1.6
HDAC7-220ENST00000471235 BCAR3O75815 825 aa25.05■■□□□ 1.6
HDAC7-220ENST00000471235 HSP90B1P14625 803 aaKnown RBP25.05■■□□□ 1.6
HDAC7-220ENST00000471235 A0A1B0GUL6 1792 aa25.04■■□□□ 1.6
HDAC7-220ENST00000471235 C7orf43Q8WVR3 580 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms