RNA–Protein interactions for RNA: ENST00000471061.1

PDCD11-203, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 410 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-203ENST00000471061 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
PDCD11-203ENST00000471061 C21orf2O43822 256 aa16.27■□□□□ 0.2
PDCD11-203ENST00000471061 ZNF428Q96B54 188 aa16.27■□□□□ 0.2
PDCD11-203ENST00000471061 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.2
PDCD11-203ENST00000471061 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
PDCD11-203ENST00000471061 CACNA1SQ13698 1873 aa16.27■□□□□ 0.19
PDCD11-203ENST00000471061 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
PDCD11-203ENST00000471061 ATP5J2-PTCD1G3V325 749 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 NTSR2O95665 410 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 ALDH1B1P30837 517 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 EXOSC9Q06265 439 aaKnown RBP16.25■□□□□ 0.19
PDCD11-203ENST00000471061 C9orf131Q5VYM1 1079 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 PRPF40BQ6NWY9 871 aaKnown RBP16.25■□□□□ 0.19
PDCD11-203ENST00000471061 NLRP10Q86W26 655 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 RNF181Q9P0P0 153 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 ANKRD36CQ5JPF3 1778 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 ABCC12Q96J65 1359 aa16.25■□□□□ 0.19
PDCD11-203ENST00000471061 IBTKQ9P2D0 1353 aaPredicted RBP16.25■□□□□ 0.19
PDCD11-203ENST00000471061 SOGA3Q5TF21 947 aa16.24■□□□□ 0.19
PDCD11-203ENST00000471061 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
PDCD11-203ENST00000471061 RASSF7Q02833 373 aa16.23■□□□□ 0.19
PDCD11-203ENST00000471061 RBM17Q96I25 401 aaKnown RBP16.23■□□□□ 0.19
PDCD11-203ENST00000471061 MYD88Q99836 296 aa16.23■□□□□ 0.19
PDCD11-203ENST00000471061 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
PDCD11-203ENST00000471061 SH3TC1Q8TE82 1336 aa16.22■□□□□ 0.19
PDCD11-203ENST00000471061 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
PDCD11-203ENST00000471061 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
PDCD11-203ENST00000471061 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
PDCD11-203ENST00000471061 KLRG2A4D1S0 409 aaPredicted RBP16.21■□□□□ 0.19
PDCD11-203ENST00000471061 HCLS1P14317 486 aaPredicted RBP16.21■□□□□ 0.19
PDCD11-203ENST00000471061 LMNB1P20700 586 aa16.21■□□□□ 0.19
PDCD11-203ENST00000471061 NEXNQ0ZGT2 675 aa16.21■□□□□ 0.19
PDCD11-203ENST00000471061 MIER1Q8N108 512 aa16.21■□□□□ 0.19
PDCD11-203ENST00000471061 DNAJC5GQ8N7S2 189 aa16.21■□□□□ 0.19
PDCD11-203ENST00000471061 SPINK5Q9NQ38 1064 aaPredicted RBP16.21■□□□□ 0.19
PDCD11-203ENST00000471061 MAP3K2Q9Y2U5 619 aa16.21■□□□□ 0.19
PDCD11-203ENST00000471061 ARFGEF2Q9Y6D5 1785 aa16.21■□□□□ 0.18
PDCD11-203ENST00000471061 CCDC93Q567U6 631 aa16.2■□□□□ 0.18
PDCD11-203ENST00000471061 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
PDCD11-203ENST00000471061 TAOK3Q9H2K8 898 aa16.2■□□□□ 0.18
PDCD11-203ENST00000471061 NMRK2Q9NPI5 230 aa16.2■□□□□ 0.18
PDCD11-203ENST00000471061 CCDC88AQ3V6T2 1871 aa16.19■□□□□ 0.18
PDCD11-203ENST00000471061 TNRC6CQ9HCJ0 1690 aaKnown RBP16.19■□□□□ 0.18
PDCD11-203ENST00000471061 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
PDCD11-203ENST00000471061 VAMP4O75379 141 aa16.19■□□□□ 0.18
PDCD11-203ENST00000471061 FKBP5Q13451 457 aaPredicted RBP16.19■□□□□ 0.18
PDCD11-203ENST00000471061 CRY2Q49AN0 593 aa16.19■□□□□ 0.18
PDCD11-203ENST00000471061 KSR2Q6VAB6 950 aa16.19■□□□□ 0.18
PDCD11-203ENST00000471061 SYNE4Q8N205 404 aa16.19■□□□□ 0.18
PDCD11-203ENST00000471061 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
PDCD11-203ENST00000471061 FAM89AQ96GI7 184 aa16.19■□□□□ 0.18
PDCD11-203ENST00000471061 E9PSI1 815 aa16.18■□□□□ 0.18
PDCD11-203ENST00000471061 HSP90B1P14625 803 aaKnown RBP16.18■□□□□ 0.18
PDCD11-203ENST00000471061 SLC10A5Q5PT55 438 aa16.18■□□□□ 0.18
PDCD11-203ENST00000471061 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
PDCD11-203ENST00000471061 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
PDCD11-203ENST00000471061 CWC25Q9NXE8 425 aaPredicted RBP16.18■□□□□ 0.18
PDCD11-203ENST00000471061 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
PDCD11-203ENST00000471061 SBF1O95248 1867 aa16.18■□□□□ 0.18
PDCD11-203ENST00000471061 RIC1Q4ADV7 1423 aa16.18■□□□□ 0.18
PDCD11-203ENST00000471061 NFKBIEO00221 500 aa16.17■□□□□ 0.18
PDCD11-203ENST00000471061 FLIIQ13045 1269 aa16.17■□□□□ 0.18
PDCD11-203ENST00000471061 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
PDCD11-203ENST00000471061 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
PDCD11-203ENST00000471061 G2E3Q7L622 706 aa16.17■□□□□ 0.18
PDCD11-203ENST00000471061 RTKN2Q8IZC4 609 aa16.17■□□□□ 0.18
PDCD11-203ENST00000471061 CRAMP1Q96RY5 1269 aa16.17■□□□□ 0.18
PDCD11-203ENST00000471061 IRS4O14654 1257 aaPredicted RBP16.16■□□□□ 0.18
PDCD11-203ENST00000471061 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
PDCD11-203ENST00000471061 HOXA10P31260 410 aaPredicted RBP16.16■□□□□ 0.18
PDCD11-203ENST00000471061 CCDC191Q8NCU4 936 aa16.16■□□□□ 0.18
PDCD11-203ENST00000471061 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
PDCD11-203ENST00000471061 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
PDCD11-203ENST00000471061 ZBTB38Q8NAP3 1195 aaPredicted RBP16.15■□□□□ 0.18
PDCD11-203ENST00000471061 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
PDCD11-203ENST00000471061 FER1L6Q2WGJ9 1857 aa16.14■□□□□ 0.17
PDCD11-203ENST00000471061 TOMM70O94826 608 aa16.14■□□□□ 0.17
PDCD11-203ENST00000471061 HTRA3P83110 453 aa16.14■□□□□ 0.17
PDCD11-203ENST00000471061 CC2D2BQ6DHV5 1058 aa16.14■□□□□ 0.17
PDCD11-203ENST00000471061 C7orf43Q8WVR3 580 aa16.14■□□□□ 0.17
PDCD11-203ENST00000471061 JARID2Q92833 1246 aaPredicted RBP16.14■□□□□ 0.17
PDCD11-203ENST00000471061 PCCAP05165 728 aaPredicted RBP16.13■□□□□ 0.17
PDCD11-203ENST00000471061 FKBP4Q02790 459 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDCD11-203ENST00000471061 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
PDCD11-203ENST00000471061 DPY19L2Q6NUT2 758 aa16.13■□□□□ 0.17
PDCD11-203ENST00000471061 DNAAF4Q8WXU2 420 aa16.13■□□□□ 0.17
PDCD11-203ENST00000471061 ZNF277Q9NRM2 450 aaPredicted RBP16.13■□□□□ 0.17
PDCD11-203ENST00000471061 ABCC4O15439 1325 aa16.13■□□□□ 0.17
PDCD11-203ENST00000471061 LTBP3Q9NS15 1303 aa16.13■□□□□ 0.17
PDCD11-203ENST00000471061 BBOX1O75936 387 aa16.12■□□□□ 0.17
PDCD11-203ENST00000471061 APLP1P51693 650 aa16.12■□□□□ 0.17
PDCD11-203ENST00000471061 CWF19L2Q2TBE0 894 aaKnown RBP16.12■□□□□ 0.17
PDCD11-203ENST00000471061 C16orf71Q8IYS4 520 aaPredicted RBP16.12■□□□□ 0.17
PDCD11-203ENST00000471061 CDCA7LQ96GN5 454 aa16.12■□□□□ 0.17
PDCD11-203ENST00000471061 LAMB2P55268 1798 aa16.12■□□□□ 0.17
PDCD11-203ENST00000471061 ZC3H4Q9UPT8 1303 aaKnown RBP16.12■□□□□ 0.17
PDCD11-203ENST00000471061 PRELPP51888 382 aa16.11■□□□□ 0.17
PDCD11-203ENST00000471061 GRAPQ13588 217 aa16.11■□□□□ 0.17
PDCD11-203ENST00000471061 GRIPAP1Q4V328 841 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms