RNA–Protein interactions for RNA: ENST00000470478.1

SEC23IP-205, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 285 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-205ENST00000470478 PDIA6Q15084 440 aa16.5■□□□□ 0.23
SEC23IP-205ENST00000470478 PROSER3Q2NL68 480 aa16.5■□□□□ 0.23
SEC23IP-205ENST00000470478 LDHDQ86WU2 507 aa16.5■□□□□ 0.23
SEC23IP-205ENST00000470478 ERBB4Q15303 1308 aa16.49■□□□□ 0.23
SEC23IP-205ENST00000470478 RNF123Q5XPI4 1314 aa16.49■□□□□ 0.23
SEC23IP-205ENST00000470478 ANXA1P04083 346 aa16.49■□□□□ 0.23
SEC23IP-205ENST00000470478 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
SEC23IP-205ENST00000470478 PSMD1Q99460 953 aa16.49■□□□□ 0.23
SEC23IP-205ENST00000470478 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
SEC23IP-205ENST00000470478 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
SEC23IP-205ENST00000470478 ITGBL1O95965 494 aaPredicted RBP16.48■□□□□ 0.23
SEC23IP-205ENST00000470478 GIGYF2Q6Y7W6 1299 aaKnown RBP16.48■□□□□ 0.23
SEC23IP-205ENST00000470478 HACL1Q9UJ83 578 aa16.48■□□□□ 0.23
SEC23IP-205ENST00000470478 EPHX2P34913 555 aa16.47■□□□□ 0.23
SEC23IP-205ENST00000470478 RIPK4P57078 832 aa16.47■□□□□ 0.23
SEC23IP-205ENST00000470478 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
SEC23IP-205ENST00000470478 CNTNAP1P78357 1384 aa16.47■□□□□ 0.23
SEC23IP-205ENST00000470478 RPGRQ92834 1020 aaKnown RBP16.46■□□□□ 0.23
SEC23IP-205ENST00000470478 PNNQ9H307 717 aaKnown RBP16.46■□□□□ 0.23
SEC23IP-205ENST00000470478 TAF1P21675 1872 aa16.46■□□□□ 0.22
SEC23IP-205ENST00000470478 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
SEC23IP-205ENST00000470478 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
SEC23IP-205ENST00000470478 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
SEC23IP-205ENST00000470478 CC2D2BQ6DHV5 1058 aa16.45■□□□□ 0.22
SEC23IP-205ENST00000470478 TNS4Q8IZW8 715 aa16.45■□□□□ 0.22
SEC23IP-205ENST00000470478 GPC2Q8N158 579 aa16.45■□□□□ 0.22
SEC23IP-205ENST00000470478 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
SEC23IP-205ENST00000470478 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
SEC23IP-205ENST00000470478 RALBP1Q15311 655 aa16.44■□□□□ 0.22
SEC23IP-205ENST00000470478 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
SEC23IP-205ENST00000470478 RBM17Q96I25 401 aaKnown RBP16.44■□□□□ 0.22
SEC23IP-205ENST00000470478 PARP10Q53GL7 1025 aa16.43■□□□□ 0.22
SEC23IP-205ENST00000470478 MAP1SQ66K74 1059 aaPredicted RBP16.43■□□□□ 0.22
SEC23IP-205ENST00000470478 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
SEC23IP-205ENST00000470478 JDP2Q8WYK2 163 aa16.43■□□□□ 0.22
SEC23IP-205ENST00000470478 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
SEC23IP-205ENST00000470478 ABCC4O15439 1325 aa16.43■□□□□ 0.22
SEC23IP-205ENST00000470478 DDX60Q8IY21 1712 aaKnown RBP16.42■□□□□ 0.22
SEC23IP-205ENST00000470478 CAPN15O75808 1086 aa16.42■□□□□ 0.22
SEC23IP-205ENST00000470478 SCNN1DP51172 638 aa16.42■□□□□ 0.22
SEC23IP-205ENST00000470478 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
SEC23IP-205ENST00000470478 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
SEC23IP-205ENST00000470478 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
SEC23IP-205ENST00000470478 CLEC11AQ9Y240 323 aa16.42■□□□□ 0.22
SEC23IP-205ENST00000470478 GJA3Q9Y6H8 435 aa16.42■□□□□ 0.22
SEC23IP-205ENST00000470478 TMEM88BA6NKF7 163 aa16.41■□□□□ 0.22
SEC23IP-205ENST00000470478 VEGFBP49765 207 aa16.41■□□□□ 0.22
SEC23IP-205ENST00000470478 COPS6Q7L5N1 327 aa16.41■□□□□ 0.22
SEC23IP-205ENST00000470478 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
SEC23IP-205ENST00000470478 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
SEC23IP-205ENST00000470478 LARGE2Q8N3Y3 721 aa16.41■□□□□ 0.22
SEC23IP-205ENST00000470478 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
SEC23IP-205ENST00000470478 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
SEC23IP-205ENST00000470478 COL4A1P02462 1669 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 TRPM7Q96QT4 1865 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 DUOX1Q9NRD9 1551 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 FOXN1O15353 648 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 EPS15P42566 896 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 EIF6P56537 245 aaKnown RBP16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
SEC23IP-205ENST00000470478 CHL1O00533 1208 aa16.39■□□□□ 0.21
SEC23IP-205ENST00000470478 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
SEC23IP-205ENST00000470478 FMR1Q06787 632 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEC23IP-205ENST00000470478 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
SEC23IP-205ENST00000470478 AIMP1Q12904 312 aaKnown RBP16.39■□□□□ 0.21
SEC23IP-205ENST00000470478 AOC3Q16853 763 aa16.39■□□□□ 0.21
SEC23IP-205ENST00000470478 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
SEC23IP-205ENST00000470478 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
SEC23IP-205ENST00000470478 THSD7BQ9C0I4 1608 aa16.38■□□□□ 0.21
SEC23IP-205ENST00000470478 PPIP5K2O43314 1243 aa16.38■□□□□ 0.21
SEC23IP-205ENST00000470478 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
SEC23IP-205ENST00000470478 NEUROD2Q15784 382 aa16.38■□□□□ 0.21
SEC23IP-205ENST00000470478 RASSF10A6NK89 507 aa16.37■□□□□ 0.21
SEC23IP-205ENST00000470478 TCIRG1Q13488 830 aa16.37■□□□□ 0.21
SEC23IP-205ENST00000470478 NIM1KQ8IY84 436 aa16.37■□□□□ 0.21
SEC23IP-205ENST00000470478 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
SEC23IP-205ENST00000470478 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
SEC23IP-205ENST00000470478 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
SEC23IP-205ENST00000470478 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
SEC23IP-205ENST00000470478 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
SEC23IP-205ENST00000470478 RUNDC1Q96C34 613 aa16.35■□□□□ 0.21
SEC23IP-205ENST00000470478 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
SEC23IP-205ENST00000470478 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
SEC23IP-205ENST00000470478 TRAF5O00463 557 aa16.34■□□□□ 0.21
SEC23IP-205ENST00000470478 CXCL9Q07325 125 aa16.34■□□□□ 0.21
SEC23IP-205ENST00000470478 SP8Q8IXZ3 490 aa16.34■□□□□ 0.21
SEC23IP-205ENST00000470478 WBP1LQ9NX94 342 aa16.34■□□□□ 0.21
SEC23IP-205ENST00000470478 SH3TC1Q8TE82 1336 aa16.34■□□□□ 0.21
SEC23IP-205ENST00000470478 BBOX1O75936 387 aa16.33■□□□□ 0.2
SEC23IP-205ENST00000470478 GRAPQ13588 217 aa16.33■□□□□ 0.2
SEC23IP-205ENST00000470478 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
SEC23IP-205ENST00000470478 DPP8Q6V1X1 898 aaPredicted RBP16.33■□□□□ 0.2
SEC23IP-205ENST00000470478 USP50Q70EL3 339 aaPredicted RBP16.33■□□□□ 0.2
SEC23IP-205ENST00000470478 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
SEC23IP-205ENST00000470478 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 1293.8 ms