RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 HOXB7P09629 217 aa9.82□□□□□ -0.84
SMC4-212ENST00000470240 FECHP22830 423 aa9.82□□□□□ -0.84
SMC4-212ENST00000470240 MCCP23508 829 aa9.82□□□□□ -0.84
SMC4-212ENST00000470240 FLIIQ13045 1269 aa9.82□□□□□ -0.84
SMC4-212ENST00000470240 IP6K1Q92551 441 aa9.82□□□□□ -0.84
SMC4-212ENST00000470240 LTV1Q96GA3 475 aaPredicted RBP9.82□□□□□ -0.84
SMC4-212ENST00000470240 PHRF1Q9P1Y6 1649 aaKnown RBP9.82□□□□□ -0.84
SMC4-212ENST00000470240 NCAPD2Q15021 1401 aa9.82□□□□□ -0.84
SMC4-212ENST00000470240 SETD1BQ9UPS6 1966 aaKnown RBP9.81□□□□□ -0.84
SMC4-212ENST00000470240 KIF1AQ12756 1690 aa9.81□□□□□ -0.84
SMC4-212ENST00000470240 RCCD1A6NED2 376 aa9.81□□□□□ -0.84
SMC4-212ENST00000470240 MCM4P33991 863 aa9.81□□□□□ -0.84
SMC4-212ENST00000470240 KRT24Q2M2I5 525 aa9.81□□□□□ -0.84
SMC4-212ENST00000470240 PLEKHO1Q53GL0 409 aaPredicted RBP9.81□□□□□ -0.84
SMC4-212ENST00000470240 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
SMC4-212ENST00000470240 MEIS3Q99687 375 aa9.81□□□□□ -0.84
SMC4-212ENST00000470240 SRCIN1Q9C0H9 1055 aa9.81□□□□□ -0.84
SMC4-212ENST00000470240 NCOA3Q9Y6Q9 1424 aa9.81□□□□□ -0.84
SMC4-212ENST00000470240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.8□□□□□ -0.84
SMC4-212ENST00000470240 FOXO3O43524 673 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 UBTFL1P0CB47 393 aaPredicted RBP9.8□□□□□ -0.84
SMC4-212ENST00000470240 TEFQ10587 303 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 SKOR2Q2VWA4 1001 aaPredicted RBP9.8□□□□□ -0.84
SMC4-212ENST00000470240 AMOTQ4VCS5 1084 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 C1orf141Q5JVX7 400 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 HDGFL1Q5TGJ6 251 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 NUTM2GQ5VZR2 741 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 LRRCC1Q9C099 1032 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 MIS18AQ9NYP9 233 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 ISY1Q9ULR0 285 aaKnown RBP9.8□□□□□ -0.84
SMC4-212ENST00000470240 NPHP4O75161 1426 aaPredicted RBP9.8□□□□□ -0.84
SMC4-212ENST00000470240 NWD1Q149M9 1564 aa9.8□□□□□ -0.84
SMC4-212ENST00000470240 NFAT5O94916 1531 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 APBB1O00213 710 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 ERC2O15083 957 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 ESCO1Q5FWF5 840 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 LMOD2Q6P5Q4 547 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 METTL3Q86U44 580 aaKnown RBP9.79□□□□□ -0.84
SMC4-212ENST00000470240 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 OSBPL3Q9H4L5 887 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 TMEM134Q9H6X4 195 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 OVOS2A0A0G2JMS6 1433 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 AOX1Q06278 1338 aa9.79□□□□□ -0.84
SMC4-212ENST00000470240 LMO7Q8WWI1 1683 aa9.78□□□□□ -0.84
SMC4-212ENST00000470240 ZBTB7CA1YPR0 619 aa9.78□□□□□ -0.84
SMC4-212ENST00000470240 GSPT1P15170 499 aaKnown RBP9.78□□□□□ -0.84
SMC4-212ENST00000470240 ATP8B2P98198 1209 aa9.78□□□□□ -0.84
SMC4-212ENST00000470240 HSP90AB4PQ58FF6 505 aa9.78□□□□□ -0.84
SMC4-212ENST00000470240 AKAP4Q5JQC9 854 aa9.78□□□□□ -0.84
SMC4-212ENST00000470240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■■■■■ 406.9
SMC4-212ENST00000470240 ADAMTSL3P82987 1691 aa9.77□□□□□ -0.84
SMC4-212ENST00000470240 GOLGA6L3A6NEY3 463 aa9.77□□□□□ -0.85
SMC4-212ENST00000470240 F6X3S4 739 aa9.77□□□□□ -0.85
SMC4-212ENST00000470240 RAB11FIP3O75154 756 aa9.77□□□□□ -0.85
SMC4-212ENST00000470240 SDSP20132 328 aa9.77□□□□□ -0.85
SMC4-212ENST00000470240 ZNF530Q6P9A1 599 aaPredicted RBP9.77□□□□□ -0.85
SMC4-212ENST00000470240 KDM3BQ7LBC6 1761 aa9.76□□□□□ -0.85
SMC4-212ENST00000470240 MX1P20591 662 aa9.76□□□□□ -0.85
SMC4-212ENST00000470240 MCM2P49736 904 aa9.76□□□□□ -0.85
SMC4-212ENST00000470240 PDE1AP54750 535 aa9.76□□□□□ -0.85
SMC4-212ENST00000470240 NUCB2P80303 420 aa9.76□□□□□ -0.85
SMC4-212ENST00000470240 G2E3Q7L622 706 aa9.76□□□□□ -0.85
SMC4-212ENST00000470240 IL17REQ8NFR9 667 aa9.76□□□□□ -0.85
SMC4-212ENST00000470240 CWC22Q9HCG8 908 aaKnown RBP9.76□□□□□ -0.85
SMC4-212ENST00000470240 SLIT3O75094 1523 aa9.76□□□□□ -0.85
SMC4-212ENST00000470240 CEMIPQ8WUJ3 1361 aa9.75□□□□□ -0.85
SMC4-212ENST00000470240 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
SMC4-212ENST00000470240 EPB41L2O43491 1005 aaKnown RBP9.75□□□□□ -0.85
SMC4-212ENST00000470240 SMARCA5O60264 1052 aaPredicted RBP9.75□□□□□ -0.85
SMC4-212ENST00000470240 TRAK2O60296 914 aa9.75□□□□□ -0.85
SMC4-212ENST00000470240 RAB3GAP1Q15042 981 aa9.75□□□□□ -0.85
SMC4-212ENST00000470240 TPRNQ4KMQ1 711 aa9.75□□□□□ -0.85
SMC4-212ENST00000470240 GPATCH3Q96I76 525 aa9.75□□□□□ -0.85
SMC4-212ENST00000470240 PRR14Q9BWN1 585 aa9.75□□□□□ -0.85
SMC4-212ENST00000470240 USP26Q9BXU7 913 aa9.75□□□□□ -0.85
SMC4-212ENST00000470240 IBTKQ9P2D0 1353 aaPredicted RBP9.75□□□□□ -0.85
SMC4-212ENST00000470240 LMTK3Q96Q04 1460 aa9.74□□□□□ -0.85
SMC4-212ENST00000470240 BTBD11A6QL63 1104 aa9.74□□□□□ -0.85
SMC4-212ENST00000470240 DDX58O95786 925 aaKnown RBP9.74□□□□□ -0.85
SMC4-212ENST00000470240 ITGBL1O95965 494 aaPredicted RBP9.74□□□□□ -0.85
SMC4-212ENST00000470240 KCNC4Q03721 635 aa9.74□□□□□ -0.85
SMC4-212ENST00000470240 MAP2K5Q13163 448 aa9.74□□□□□ -0.85
SMC4-212ENST00000470240 USHBP1Q8N6Y0 703 aa9.74□□□□□ -0.85
SMC4-212ENST00000470240 EIF2S2P20042 333 aaKnown RBP9.73□□□□□ -0.85
SMC4-212ENST00000470240 DDIT3P35638 169 aa9.73□□□□□ -0.85
SMC4-212ENST00000470240 APLP1P51693 650 aa9.73□□□□□ -0.85
SMC4-212ENST00000470240 EIF4A1P60842 406 aaKnown RBP9.73□□□□□ -0.85
SMC4-212ENST00000470240 ERC1Q8IUD2 1116 aa9.73□□□□□ -0.85
SMC4-212ENST00000470240 C16orf71Q8IYS4 520 aaPredicted RBP9.73□□□□□ -0.85
SMC4-212ENST00000470240 DNAAF4Q8WXU2 420 aa9.73□□□□□ -0.85
SMC4-212ENST00000470240 KIF1BPQ96EK5 621 aa9.73□□□□□ -0.85
SMC4-212ENST00000470240 DBF4Q9UBU7 674 aaPredicted RBP9.73□□□□□ -0.85
SMC4-212ENST00000470240 EXOC6BQ9Y2D4 811 aa9.73□□□□□ -0.85
SMC4-212ENST00000470240 LRRFIP2Q9Y608 721 aaKnown RBP9.73□□□□□ -0.85
SMC4-212ENST00000470240 CAMTA1Q9Y6Y1 1673 aa9.73□□□□□ -0.85
SMC4-212ENST00000470240 ALDH1L1O75891 902 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 GCP02774 474 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 PRKCSHP14314 528 aaPredicted RBP9.72□□□□□ -0.85
SMC4-212ENST00000470240 MRE11P49959 708 aa9.72□□□□□ -0.85
SMC4-212ENST00000470240 ANAPC15P60006 121 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms