RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 BAG4O95429 457 aaKnown RBP18.24■□□□□ 0.51
BRAT1-204ENST00000469750 HLA-DOAP06340 250 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 CKAP2LQ8IYA6 745 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 SSR1P43307 286 aaKnown RBP18.24■□□□□ 0.51
BRAT1-204ENST00000469750 ST5P78524 1137 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 CRNKL1Q9BZJ0 848 aaKnown RBP18.24■□□□□ 0.51
BRAT1-204ENST00000469750 SLC39A6Q13433 755 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 CCDC144CPQ8IYA2 1237 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 UBXN4Q92575 508 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 CENPHQ9H3R5 247 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 TFIP11Q9UBB9 837 aaKnown RBP18.24■□□□□ 0.51
BRAT1-204ENST00000469750 GRM8O00222 908 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 CETN2P41208 172 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 ZRSR2Q15696 482 aaKnown RBP18.24■□□□□ 0.51
BRAT1-204ENST00000469750 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 SCLT1Q96NL6 688 aa18.24■□□□□ 0.51
BRAT1-204ENST00000469750 PUS7Q96PZ0 661 aaKnown RBP18.24■□□□□ 0.51
BRAT1-204ENST00000469750 VPS36Q86VN1 386 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 CABP5Q9NP86 173 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 TCP11L1Q9NUJ3 509 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
BRAT1-204ENST00000469750 WDR7Q9Y4E6 1490 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 MCM5P33992 734 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 GSTO1P78417 241 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 TBC1D32Q96NH3 1257 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 FEZ1Q99689 392 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 POLKQ9UBT6 870 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 ATP2B3Q16720 1220 aa18.23■□□□□ 0.51
BRAT1-204ENST00000469750 FLT4P35916 1363 aa18.22■□□□□ 0.51
BRAT1-204ENST00000469750 SDSP20132 328 aa18.22■□□□□ 0.51
BRAT1-204ENST00000469750 PTPN14Q15678 1187 aa18.22■□□□□ 0.51
BRAT1-204ENST00000469750 POLR3AO14802 1390 aaPredicted RBP18.22■□□□□ 0.51
BRAT1-204ENST00000469750 CALML4Q96GE6 196 aa18.22■□□□□ 0.51
BRAT1-204ENST00000469750 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
BRAT1-204ENST00000469750 ZNF622Q969S3 477 aaKnown RBP eCLIP18.22■□□□□ 0.51
BRAT1-204ENST00000469750 DNAI2Q9GZS0 605 aa18.22■□□□□ 0.51
BRAT1-204ENST00000469750 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
BRAT1-204ENST00000469750 PDE1AP54750 535 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 TTLL12Q14166 644 aaPredicted RBP18.21■□□□□ 0.51
BRAT1-204ENST00000469750 GDPD2Q9HCC8 539 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 ATP6V1AP38606 617 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 WDR78Q5VTH9 848 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 LMBR1LQ6UX01 489 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 SMARCC1Q92922 1105 aaPredicted RBP18.21■□□□□ 0.51
BRAT1-204ENST00000469750 SLC26A6Q9BXS9 759 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 ANKRD62A6NC57 917 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 AMPD3Q01432 767 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 PYM1Q9BRP8 204 aaKnown RBP18.21■□□□□ 0.51
BRAT1-204ENST00000469750 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
BRAT1-204ENST00000469750 IL15P40933 162 aaPredicted RBP18.21■□□□□ 0.51
BRAT1-204ENST00000469750 TRAPPC8Q9Y2L5 1435 aa18.2■□□□□ 0.5
BRAT1-204ENST00000469750 KIF5CO60282 957 aa18.2■□□□□ 0.5
BRAT1-204ENST00000469750 FAM193AP78312 1265 aa18.2■□□□□ 0.5
BRAT1-204ENST00000469750 MTHFSDQ2M296 383 aaKnown RBP18.2■□□□□ 0.5
BRAT1-204ENST00000469750 TAX1BP1Q86VP1 789 aa18.2■□□□□ 0.5
BRAT1-204ENST00000469750 BRF1Q92994 677 aa18.2■□□□□ 0.5
BRAT1-204ENST00000469750 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
BRAT1-204ENST00000469750 NEBLO76041 1014 aa18.2■□□□□ 0.5
BRAT1-204ENST00000469750 ENOX2Q16206 610 aaKnown RBP18.2■□□□□ 0.5
BRAT1-204ENST00000469750 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
BRAT1-204ENST00000469750 PARD3Q8TEW0 1356 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 TOM1O60784 492 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 IBSPP21815 317 aaPredicted RBP18.19■□□□□ 0.5
BRAT1-204ENST00000469750 KRT23Q9C075 422 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 UBA7P41226 1012 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 WTAPQ15007 396 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 STX1AQ16623 288 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 RAB11FIP4Q86YS3 637 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 ZMYND15Q9H091 742 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 NLRP3Q96P20 1036 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 GBP3Q9H0R5 595 aa18.19■□□□□ 0.5
BRAT1-204ENST00000469750 ZSCAN16Q9H4T2 348 aaPredicted RBP18.19■□□□□ 0.5
BRAT1-204ENST00000469750 KLF18A0A0U1RQI7 1052 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 NPATQ14207 1427 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 CYP7A1P22680 504 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 ZGPATQ8N5A5 531 aaKnown RBP18.18■□□□□ 0.5
BRAT1-204ENST00000469750 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
BRAT1-204ENST00000469750 ABCC10Q5T3U5 1492 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 KIAA0754O94854 1291 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 IDEP14735 1019 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 CHMP4BP1P59074 171 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 KANK3Q6NY19 840 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 USP25Q9UHP3 1055 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 YEATS4O95619 227 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 DDB1Q16531 1140 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 KIF18AQ8NI77 898 aa18.18■□□□□ 0.5
BRAT1-204ENST00000469750 IL2RBP14784 551 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 LRRC59Q96AG4 307 aaKnown RBP18.17■□□□□ 0.5
BRAT1-204ENST00000469750 TMX3Q96JJ7 454 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 BIN1O00499 593 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 MTIF2P46199 727 aaKnown RBP18.17■□□□□ 0.5
BRAT1-204ENST00000469750 CCDC102AQ96A19 550 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 STX8Q9UNK0 236 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 UBE2HP62256 183 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 KIF4BQ2VIQ3 1234 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms