RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 RTKN2Q8IZC4 609 aa27.51■■□□□ 1.99
RTN4R-205ENST00000469601 NLRP3Q96P20 1036 aa27.51■■□□□ 1.99
RTN4R-205ENST00000469601 IL16Q14005 1332 aa27.5■■□□□ 1.99
RTN4R-205ENST00000469601 ELL2O00472 640 aaPredicted RBP27.5■■□□□ 1.99
RTN4R-205ENST00000469601 HOXA10P31260 410 aaPredicted RBP27.5■■□□□ 1.99
RTN4R-205ENST00000469601 PRELPP51888 382 aa27.5■■□□□ 1.99
RTN4R-205ENST00000469601 SLC10A5Q5PT55 438 aa27.5■■□□□ 1.99
RTN4R-205ENST00000469601 NLRP10Q86W26 655 aa27.5■■□□□ 1.99
RTN4R-205ENST00000469601 RBM17Q96I25 401 aaKnown RBP27.5■■□□□ 1.99
RTN4R-205ENST00000469601 NMRK2Q9NPI5 230 aa27.5■■□□□ 1.99
RTN4R-205ENST00000469601 SENP3-EIF4A1A0A087X0R7 540 aa27.49■■□□□ 1.99
RTN4R-205ENST00000469601 CCDC30Q5VVM6 783 aa27.49■■□□□ 1.99
RTN4R-205ENST00000469601 C8orf58Q8NAV2 365 aa27.49■■□□□ 1.99
RTN4R-205ENST00000469601 TOMM70O94826 608 aa27.48■■□□□ 1.99
RTN4R-205ENST00000469601 C16orf71Q8IYS4 520 aaPredicted RBP27.48■■□□□ 1.99
RTN4R-205ENST00000469601 GLTPD2A6NH11 291 aa27.47■■□□□ 1.99
RTN4R-205ENST00000469601 GOLGA2Q08379 1002 aa27.47■■□□□ 1.99
RTN4R-205ENST00000469601 CC2D2BQ6DHV5 1058 aa27.47■■□□□ 1.99
RTN4R-205ENST00000469601 DPY19L2Q6NUT2 758 aa27.47■■□□□ 1.99
RTN4R-205ENST00000469601 CRAMP1Q96RY5 1269 aa27.47■■□□□ 1.99
RTN4R-205ENST00000469601 TRMT112Q9UI30 125 aaKnown RBP27.47■■□□□ 1.99
RTN4R-205ENST00000469601 ARFGEF2Q9Y6D5 1785 aa27.47■■□□□ 1.99
RTN4R-205ENST00000469601 SLX4Q8IY92 1834 aa27.46■■□□□ 1.99
RTN4R-205ENST00000469601 FKBP4Q02790 459 aaKnown RBP eCLIP27.46■■□□□ 1.99
RTN4R-205ENST00000469601 GRIPAP1Q4V328 841 aa27.46■■□□□ 1.99
RTN4R-205ENST00000469601 SBF1O95248 1867 aa27.46■■□□□ 1.99
RTN4R-205ENST00000469601 SH3TC1Q8TE82 1336 aa27.45■■□□□ 1.99
RTN4R-205ENST00000469601 TNRC6CQ9HCJ0 1690 aaKnown RBP27.44■■□□□ 1.98
RTN4R-205ENST00000469601 RIC3Q7Z5B4 369 aa27.44■■□□□ 1.98
RTN4R-205ENST00000469601 TSR2Q969E8 191 aaKnown RBP27.44■■□□□ 1.98
RTN4R-205ENST00000469601 WDR63Q8IWG1 891 aa27.43■■□□□ 1.98
RTN4R-205ENST00000469601 ISCA1Q9BUE6 129 aa27.43■■□□□ 1.98
RTN4R-205ENST00000469601 TMX4Q9H1E5 349 aaPredicted RBP27.43■■□□□ 1.98
RTN4R-205ENST00000469601 RRAGCQ9HB90 399 aa27.43■■□□□ 1.98
RTN4R-205ENST00000469601 DDX58O95786 925 aaKnown RBP27.42■■□□□ 1.98
RTN4R-205ENST00000469601 TRIM28Q13263 835 aaKnown RBP27.42■■□□□ 1.98
RTN4R-205ENST00000469601 FAM9BQ8IZU0 186 aa27.42■■□□□ 1.98
RTN4R-205ENST00000469601 FER1L6Q2WGJ9 1857 aa27.42■■□□□ 1.98
RTN4R-205ENST00000469601 TSPYL6Q8N831 410 aa27.41■■□□□ 1.98
RTN4R-205ENST00000469601 RBM46Q8TBY0 533 aaKnown RBP27.41■■□□□ 1.98
RTN4R-205ENST00000469601 STK31Q9BXU1 1019 aa27.41■■□□□ 1.98
RTN4R-205ENST00000469601 VEGFAP15692 232 aaPredicted RBP27.4■■□□□ 1.98
RTN4R-205ENST00000469601 C3orf67Q6ZVT6 689 aa27.4■■□□□ 1.98
RTN4R-205ENST00000469601 PHAXQ9H814 394 aaKnown RBP27.4■■□□□ 1.98
RTN4R-205ENST00000469601 ATP5J2-PTCD1G3V325 749 aa27.39■■□□□ 1.98
RTN4R-205ENST00000469601 PPEF1O14829 653 aaPredicted RBP27.39■■□□□ 1.98
RTN4R-205ENST00000469601 HCLS1P14317 486 aaPredicted RBP27.39■■□□□ 1.98
RTN4R-205ENST00000469601 TWISTNBQ3B726 338 aaPredicted RBP27.39■■□□□ 1.98
RTN4R-205ENST00000469601 PSMD1Q99460 953 aa27.39■■□□□ 1.98
RTN4R-205ENST00000469601 ANKRD36CQ5JPF3 1778 aa27.38■■□□□ 1.97
RTN4R-205ENST00000469601 HSPA6P17066 643 aa27.38■■□□□ 1.97
RTN4R-205ENST00000469601 OLFM4Q6UX06 510 aa27.38■■□□□ 1.97
RTN4R-205ENST00000469601 ZNF277Q9NRM2 450 aaPredicted RBP27.38■■□□□ 1.97
RTN4R-205ENST00000469601 SALL2Q9Y467 1007 aaPredicted RBP27.38■■□□□ 1.97
RTN4R-205ENST00000469601 BBOX1O75936 387 aa27.37■■□□□ 1.97
RTN4R-205ENST00000469601 HSP90B1P14625 803 aaKnown RBP27.37■■□□□ 1.97
RTN4R-205ENST00000469601 DDX46Q7L014 1031 aaKnown RBP27.37■■□□□ 1.97
RTN4R-205ENST00000469601 SYNE4Q8N205 404 aa27.37■■□□□ 1.97
RTN4R-205ENST00000469601 CACNA1SQ13698 1873 aa27.36■■□□□ 1.97
RTN4R-205ENST00000469601 TIAM2Q8IVF5 1701 aa27.36■■□□□ 1.97
RTN4R-205ENST00000469601 IARSP41252 1262 aaKnown RBP27.35■■□□□ 1.97
RTN4R-205ENST00000469601 FSTL1Q12841 308 aa27.35■■□□□ 1.97
RTN4R-205ENST00000469601 FANCIQ9NVI1 1328 aa27.35■■□□□ 1.97
RTN4R-205ENST00000469601 FAM89AQ96GI7 184 aa27.34■■□□□ 1.97
RTN4R-205ENST00000469601 ATP6V0A2Q9Y487 856 aa27.34■■□□□ 1.97
RTN4R-205ENST00000469601 ABCC4O15439 1325 aa27.34■■□□□ 1.97
RTN4R-205ENST00000469601 ZBTB38Q8NAP3 1195 aaPredicted RBP27.33■■□□□ 1.97
RTN4R-205ENST00000469601 CCDC191Q8NCU4 936 aa27.33■■□□□ 1.97
RTN4R-205ENST00000469601 MYD88Q99836 296 aa27.33■■□□□ 1.97
RTN4R-205ENST00000469601 TMC4Q7Z404 712 aa27.32■■□□□ 1.96
RTN4R-205ENST00000469601 JDP2Q8WYK2 163 aa27.32■■□□□ 1.96
RTN4R-205ENST00000469601 METTL22Q9BUU2 404 aaPredicted RBP27.32■■□□□ 1.96
RTN4R-205ENST00000469601 MYH16Q9H6N6 1097 aa27.32■■□□□ 1.96
RTN4R-205ENST00000469601 SNED1Q8TER0 1413 aa27.32■■□□□ 1.96
RTN4R-205ENST00000469601 TCERG1O14776 1098 aaKnown RBP27.31■■□□□ 1.96
RTN4R-205ENST00000469601 GRAPQ13588 217 aa27.31■■□□□ 1.96
RTN4R-205ENST00000469601 KSR2Q6VAB6 950 aa27.31■■□□□ 1.96
RTN4R-205ENST00000469601 SMC1BQ8NDV3 1235 aa27.31■■□□□ 1.96
RTN4R-205ENST00000469601 GRAPLQ8TC17 118 aaPredicted RBP27.31■■□□□ 1.96
RTN4R-205ENST00000469601 IRS4O14654 1257 aaPredicted RBP27.3■■□□□ 1.96
RTN4R-205ENST00000469601 SF3B3Q15393 1217 aaKnown RBP27.3■■□□□ 1.96
RTN4R-205ENST00000469601 SP8Q8IXZ3 490 aa27.3■■□□□ 1.96
RTN4R-205ENST00000469601 CWC25Q9NXE8 425 aaPredicted RBP27.3■■□□□ 1.96
RTN4R-205ENST00000469601 DDNO94850 711 aaPredicted RBP27.29■■□□□ 1.96
RTN4R-205ENST00000469601 SLC4A2P04920 1241 aa27.29■■□□□ 1.96
RTN4R-205ENST00000469601 NEXNQ0ZGT2 675 aa27.29■■□□□ 1.96
RTN4R-205ENST00000469601 SUPT20HQ8NEM7 779 aa27.29■■□□□ 1.96
RTN4R-205ENST00000469601 ZNF428Q96B54 188 aa27.29■■□□□ 1.96
RTN4R-205ENST00000469601 VPS33BQ9H267 617 aa27.29■■□□□ 1.96
RTN4R-205ENST00000469601 MAP3K2Q9Y2U5 619 aa27.29■■□□□ 1.96
RTN4R-205ENST00000469601 CCDC88AQ3V6T2 1871 aa27.29■■□□□ 1.96
RTN4R-205ENST00000469601 DICER1Q9UPY3 1922 aaKnown RBP27.29■■□□□ 1.96
RTN4R-205ENST00000469601 IQCA1LA6NCM1 817 aa27.28■■□□□ 1.96
RTN4R-205ENST00000469601 APLP1P51693 650 aa27.28■■□□□ 1.96
RTN4R-205ENST00000469601 PI4KAP2A4QPH2 592 aa27.27■■□□□ 1.96
RTN4R-205ENST00000469601 FZD9O00144 591 aa27.27■■□□□ 1.96
RTN4R-205ENST00000469601 PCCAP05165 728 aaPredicted RBP27.27■■□□□ 1.96
RTN4R-205ENST00000469601 RTL5Q5HYW3 569 aaPredicted RBP27.27■■□□□ 1.96
RTN4R-205ENST00000469601 PI4KAP1Q8N8J0 262 aa27.27■■□□□ 1.96
RTN4R-205ENST00000469601 WDR90Q96KV7 1748 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms