RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 RFC4P35249 363 aa21.99■■□□□ 1.11
RPL39-202ENST00000468844 ZNF34Q8IZ26 560 aa21.99■■□□□ 1.11
RPL39-202ENST00000468844 TFCP2L1Q9NZI6 479 aa21.99■■□□□ 1.11
RPL39-202ENST00000468844 ZPR1O75312 459 aa21.98■■□□□ 1.11
RPL39-202ENST00000468844 ZNF652Q9Y2D9 606 aa21.98■■□□□ 1.11
RPL39-202ENST00000468844 DDX60Q8IY21 1712 aaKnown RBP21.98■■□□□ 1.11
RPL39-202ENST00000468844 RGL2O15211 777 aa21.98■■□□□ 1.11
RPL39-202ENST00000468844 GNAI2P04899 355 aa21.98■■□□□ 1.11
RPL39-202ENST00000468844 NLRP10Q86W26 655 aa21.98■■□□□ 1.11
RPL39-202ENST00000468844 LRRFIP2Q9Y608 721 aaKnown RBP21.98■■□□□ 1.11
RPL39-202ENST00000468844 UBE3BQ7Z3V4 1068 aa21.96■■□□□ 1.11
RPL39-202ENST00000468844 CASP7P55210 303 aa21.96■■□□□ 1.11
RPL39-202ENST00000468844 JARID2Q92833 1246 aaPredicted RBP21.96■■□□□ 1.11
RPL39-202ENST00000468844 UPF1Q92900 1129 aaKnown RBP eCLIP21.96■■□□□ 1.11
RPL39-202ENST00000468844 CEP85Q6P2H3 762 aa21.95■■□□□ 1.1
RPL39-202ENST00000468844 SIRT2Q8IXJ6 389 aa21.95■■□□□ 1.1
RPL39-202ENST00000468844 KAZALD1Q96I82 304 aa21.95■■□□□ 1.1
RPL39-202ENST00000468844 NIP7Q9Y221 180 aaKnown RBP eCLIP21.95■■□□□ 1.1
RPL39-202ENST00000468844 PNPLA7Q6ZV29 1317 aa21.94■■□□□ 1.1
RPL39-202ENST00000468844 H7C1W4 665 aa21.94■■□□□ 1.1
RPL39-202ENST00000468844 SLC15A2Q16348 729 aa21.94■■□□□ 1.1
RPL39-202ENST00000468844 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
RPL39-202ENST00000468844 TBC1D9BQ66K14 1250 aa21.94■■□□□ 1.1
RPL39-202ENST00000468844 SUCLG2Q96I99 432 aa21.94■■□□□ 1.1
RPL39-202ENST00000468844 IGHDP01880 384 aa21.93■■□□□ 1.1
RPL39-202ENST00000468844 COL23A1Q86Y22 540 aaPredicted RBP21.93■■□□□ 1.1
RPL39-202ENST00000468844 GYS1P13807 737 aa21.92■■□□□ 1.1
RPL39-202ENST00000468844 ANKRD44Q8N8A2 993 aa21.92■■□□□ 1.1
RPL39-202ENST00000468844 KDM2BQ8NHM5 1336 aa21.92■■□□□ 1.1
RPL39-202ENST00000468844 PARP10Q53GL7 1025 aa21.92■■□□□ 1.1
RPL39-202ENST00000468844 RPAP2Q8IXW5 612 aaPredicted RBP21.92■■□□□ 1.1
RPL39-202ENST00000468844 ZBTB38Q8NAP3 1195 aaPredicted RBP21.92■■□□□ 1.1
RPL39-202ENST00000468844 FAM89AQ96GI7 184 aa21.92■■□□□ 1.1
RPL39-202ENST00000468844 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
RPL39-202ENST00000468844 HDAC1Q13547 482 aaPredicted RBP21.91■■□□□ 1.1
RPL39-202ENST00000468844 SUSD4Q5VX71 490 aa21.91■■□□□ 1.1
RPL39-202ENST00000468844 FLAD1Q8NFF5 587 aa21.91■■□□□ 1.1
RPL39-202ENST00000468844 STK32BQ9NY57 414 aa21.91■■□□□ 1.1
RPL39-202ENST00000468844 BICDL1Q6ZP65 573 aa21.9■■□□□ 1.1
RPL39-202ENST00000468844 BICC1Q9H694 974 aaKnown RBP21.9■■□□□ 1.1
RPL39-202ENST00000468844 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
RPL39-202ENST00000468844 EPHA10Q5JZY3 1008 aa21.9■■□□□ 1.1
RPL39-202ENST00000468844 SYNE4Q8N205 404 aa21.9■■□□□ 1.1
RPL39-202ENST00000468844 PNMA6EA0A0J9YXQ4 647 aa21.89■■□□□ 1.09
RPL39-202ENST00000468844 NTSR2O95665 410 aa21.89■■□□□ 1.09
RPL39-202ENST00000468844 ILDR2Q71H61 639 aa21.89■■□□□ 1.09
RPL39-202ENST00000468844 HDAC5Q9UQL6 1122 aa21.89■■□□□ 1.09
RPL39-202ENST00000468844 FAM177BA6PVY3 158 aa21.88■■□□□ 1.09
RPL39-202ENST00000468844 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
RPL39-202ENST00000468844 CDHR2Q9BYE9 1310 aa21.88■■□□□ 1.09
RPL39-202ENST00000468844 GOLGB1Q14789 3259 aaKnown RBP21.88■■□□□ 1.09
RPL39-202ENST00000468844 SETDB2Q96T68 719 aa21.88■■□□□ 1.09
RPL39-202ENST00000468844 ATP8B2P98198 1209 aa21.87■■□□□ 1.09
RPL39-202ENST00000468844 MTX1Q13505 466 aa21.87■■□□□ 1.09
RPL39-202ENST00000468844 PPP1R42Q7Z4L9 355 aa21.87■■□□□ 1.09
RPL39-202ENST00000468844 UTP14AQ9BVJ6 771 aaKnown RBP21.87■■□□□ 1.09
RPL39-202ENST00000468844 NRXN2Q9P2S2 1712 aa21.87■■□□□ 1.09
RPL39-202ENST00000468844 MSH5O43196 834 aa21.86■■□□□ 1.09
RPL39-202ENST00000468844 NFIXQ14938 502 aa21.86■■□□□ 1.09
RPL39-202ENST00000468844 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
RPL39-202ENST00000468844 CARMIL3Q8ND23 1372 aa21.86■■□□□ 1.09
RPL39-202ENST00000468844 TAF1P21675 1872 aa21.86■■□□□ 1.09
RPL39-202ENST00000468844 RABL6Q3YEC7 729 aaPredicted RBP21.86■■□□□ 1.09
RPL39-202ENST00000468844 CENPQQ7L2Z9 268 aaPredicted RBP21.86■■□□□ 1.09
RPL39-202ENST00000468844 FOXO4P98177 505 aa21.85■■□□□ 1.09
RPL39-202ENST00000468844 NUTM1Q86Y26 1132 aa21.85■■□□□ 1.09
RPL39-202ENST00000468844 SRGAP3O43295 1099 aa21.84■■□□□ 1.09
RPL39-202ENST00000468844 SSH3Q8TE77 659 aa21.84■■□□□ 1.09
RPL39-202ENST00000468844 PLA2G12BQ9BX93 195 aa21.84■■□□□ 1.09
RPL39-202ENST00000468844 SPEF2Q9C093 1822 aa21.84■■□□□ 1.09
RPL39-202ENST00000468844 TNRC6CQ9HCJ0 1690 aaKnown RBP21.84■■□□□ 1.09
RPL39-202ENST00000468844 IRS4O14654 1257 aaPredicted RBP21.84■■□□□ 1.09
RPL39-202ENST00000468844 HMMRO75330 724 aa21.83■■□□□ 1.09
RPL39-202ENST00000468844 TM4SF1P30408 202 aa21.83■■□□□ 1.09
RPL39-202ENST00000468844 POLA2Q14181 598 aa21.83■■□□□ 1.09
RPL39-202ENST00000468844 ANKRD31Q8N7Z5 1873 aa21.83■■□□□ 1.09
RPL39-202ENST00000468844 PDGFDQ9GZP0 370 aaPredicted RBP21.82■■□□□ 1.08
RPL39-202ENST00000468844 LMBR1LQ6UX01 489 aa21.82■■□□□ 1.08
RPL39-202ENST00000468844 NBPF5PQ86XG9 351 aaPredicted RBP21.82■■□□□ 1.08
RPL39-202ENST00000468844 SMC5Q8IY18 1101 aa21.82■■□□□ 1.08
RPL39-202ENST00000468844 ABCC12Q96J65 1359 aa21.82■■□□□ 1.08
RPL39-202ENST00000468844 ERFEQ4G0M1 354 aa21.81■■□□□ 1.08
RPL39-202ENST00000468844 NLGN1Q8N2Q7 840 aa21.81■■□□□ 1.08
RPL39-202ENST00000468844 NYXQ9GZU5 481 aa21.81■■□□□ 1.08
RPL39-202ENST00000468844 HCLS1P14317 486 aaPredicted RBP21.8■■□□□ 1.08
RPL39-202ENST00000468844 DDR1Q08345 913 aa21.8■■□□□ 1.08
RPL39-202ENST00000468844 DCTPP1Q9H773 170 aa21.8■■□□□ 1.08
RPL39-202ENST00000468844 PDE8AO60658 829 aa21.8■■□□□ 1.08
RPL39-202ENST00000468844 TPTE2Q6XPS3 522 aa21.79■■□□□ 1.08
RPL39-202ENST00000468844 POLRMTO00411 1230 aaKnown RBP21.78■■□□□ 1.08
RPL39-202ENST00000468844 CSF1RP07333 972 aa21.78■■□□□ 1.08
RPL39-202ENST00000468844 CTSWP56202 376 aa21.78■■□□□ 1.08
RPL39-202ENST00000468844 MSL1Q68DK7 614 aa21.78■■□□□ 1.08
RPL39-202ENST00000468844 GCC1Q96CN9 775 aa21.78■■□□□ 1.08
RPL39-202ENST00000468844 GTF2E1P29083 439 aaPredicted RBP21.78■■□□□ 1.08
RPL39-202ENST00000468844 TTLL11Q8NHH1 800 aa21.78■■□□□ 1.08
RPL39-202ENST00000468844 CHMP3Q9Y3E7 222 aa21.78■■□□□ 1.08
RPL39-202ENST00000468844 SRCAPQ6ZRS2 3230 aa21.77■■□□□ 1.08
RPL39-202ENST00000468844 RFX5P48382 616 aaPredicted RBP21.77■■□□□ 1.08
RPL39-202ENST00000468844 EXOC6BQ9Y2D4 811 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms