RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
HDAC6-215ENST00000465457 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
HDAC6-215ENST00000465457 ZNF521Q96K83 1311 aa17.96■□□□□ 0.46
HDAC6-215ENST00000465457 PRAMEF22A3QJZ6 481 aa17.95■□□□□ 0.46
HDAC6-215ENST00000465457 NPR1P16066 1061 aa17.95■□□□□ 0.46
HDAC6-215ENST00000465457 CST9Q5W186 159 aa17.95■□□□□ 0.46
HDAC6-215ENST00000465457 NBPF5PQ86XG9 351 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-215ENST00000465457 IL17REQ8NFR9 667 aa17.95■□□□□ 0.46
HDAC6-215ENST00000465457 MCOLN1Q9GZU1 580 aa17.95■□□□□ 0.46
HDAC6-215ENST00000465457 SCNN1DP51172 638 aa17.94■□□□□ 0.46
HDAC6-215ENST00000465457 GPC2Q8N158 579 aa17.94■□□□□ 0.46
HDAC6-215ENST00000465457 SYNE4Q8N205 404 aa17.94■□□□□ 0.46
HDAC6-215ENST00000465457 GPR101Q96P66 508 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-215ENST00000465457 GJA3Q9Y6H8 435 aa17.94■□□□□ 0.46
HDAC6-215ENST00000465457 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-215ENST00000465457 FAM177BA6PVY3 158 aa17.93■□□□□ 0.46
HDAC6-215ENST00000465457 EPS15P42566 896 aa17.93■□□□□ 0.46
HDAC6-215ENST00000465457 ABCC12Q96J65 1359 aa17.92■□□□□ 0.46
HDAC6-215ENST00000465457 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
HDAC6-215ENST00000465457 DIAPH1O60610 1272 aaKnown RBP17.91■□□□□ 0.46
HDAC6-215ENST00000465457 BEGAINQ9BUH8 593 aa17.91■□□□□ 0.46
HDAC6-215ENST00000465457 USP16Q9Y5T5 823 aa17.91■□□□□ 0.46
HDAC6-215ENST00000465457 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-215ENST00000465457 ECE1P42892 770 aa17.9■□□□□ 0.46
HDAC6-215ENST00000465457 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
HDAC6-215ENST00000465457 TEFQ10587 303 aa17.9■□□□□ 0.46
HDAC6-215ENST00000465457 CCDC27Q2M243 656 aa17.9■□□□□ 0.46
HDAC6-215ENST00000465457 RTKN2Q8IZC4 609 aa17.9■□□□□ 0.46
HDAC6-215ENST00000465457 FMNL2Q96PY5 1086 aa17.9■□□□□ 0.46
HDAC6-215ENST00000465457 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-215ENST00000465457 TLL2Q9Y6L7 1015 aa17.9■□□□□ 0.46
HDAC6-215ENST00000465457 NUP98P52948 1817 aa17.9■□□□□ 0.46
HDAC6-215ENST00000465457 APAF1O14727 1248 aa17.89■□□□□ 0.45
HDAC6-215ENST00000465457 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.45
HDAC6-215ENST00000465457 LAMB4A4D0S4 1761 aa17.89■□□□□ 0.45
HDAC6-215ENST00000465457 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC6-215ENST00000465457 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-215ENST00000465457 CEMIPQ8WUJ3 1361 aa17.88■□□□□ 0.45
HDAC6-215ENST00000465457 E9PSI1 815 aa17.87■□□□□ 0.45
HDAC6-215ENST00000465457 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
HDAC6-215ENST00000465457 PSMD1Q99460 953 aa17.87■□□□□ 0.45
HDAC6-215ENST00000465457 RCAN3Q9UKA8 241 aa17.87■□□□□ 0.45
HDAC6-215ENST00000465457 GNAT3A8MTJ3 354 aa17.86■□□□□ 0.45
HDAC6-215ENST00000465457 NBPF26B4DH59 902 aa17.86■□□□□ 0.45
HDAC6-215ENST00000465457 LMOD1P29536 600 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-215ENST00000465457 DGKZQ13574 1117 aa17.86■□□□□ 0.45
HDAC6-215ENST00000465457 HLFQ16534 295 aa17.86■□□□□ 0.45
HDAC6-215ENST00000465457 NBPF10Q6P3W6 841 aaKnown RBP17.86■□□□□ 0.45
HDAC6-215ENST00000465457 NBPF15Q8N660 670 aa17.86■□□□□ 0.45
HDAC6-215ENST00000465457 JDP2Q8WYK2 163 aa17.86■□□□□ 0.45
HDAC6-215ENST00000465457 ZIC5Q96T25 663 aa17.86■□□□□ 0.45
HDAC6-215ENST00000465457 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
HDAC6-215ENST00000465457 EIF6P56537 245 aaKnown RBP17.85■□□□□ 0.45
HDAC6-215ENST00000465457 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
HDAC6-215ENST00000465457 SAPCD2Q86UD0 394 aa17.85■□□□□ 0.45
HDAC6-215ENST00000465457 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
HDAC6-215ENST00000465457 NEFMP07197 916 aa17.84■□□□□ 0.45
HDAC6-215ENST00000465457 MAP2K2P36507 400 aa17.84■□□□□ 0.45
HDAC6-215ENST00000465457 SLFN5Q08AF3 891 aa17.84■□□□□ 0.45
HDAC6-215ENST00000465457 TPTE2Q6XPS3 522 aa17.84■□□□□ 0.45
HDAC6-215ENST00000465457 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
HDAC6-215ENST00000465457 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
HDAC6-215ENST00000465457 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
HDAC6-215ENST00000465457 BTBD11A6QL63 1104 aa17.83■□□□□ 0.44
HDAC6-215ENST00000465457 CELF2O95319 508 aaKnown RBP17.83■□□□□ 0.44
HDAC6-215ENST00000465457 SOX10P56693 466 aa17.83■□□□□ 0.44
HDAC6-215ENST00000465457 CRY2Q49AN0 593 aa17.83■□□□□ 0.44
HDAC6-215ENST00000465457 CIAPIN1Q6FI81 312 aa17.83■□□□□ 0.44
HDAC6-215ENST00000465457 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.44
HDAC6-215ENST00000465457 CDCA7LQ96GN5 454 aa17.83■□□□□ 0.44
HDAC6-215ENST00000465457 GLIS2Q9BZE0 524 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-215ENST00000465457 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
HDAC6-215ENST00000465457 DUSP27Q5VZP5 1158 aa17.82■□□□□ 0.44
HDAC6-215ENST00000465457 USP50Q70EL3 339 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-215ENST00000465457 LARGE2Q8N3Y3 721 aa17.82■□□□□ 0.44
HDAC6-215ENST00000465457 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 LAMB2P55268 1798 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 BRPF1P55201 1214 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-215ENST00000465457 DLK2Q6UY11 383 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 WWC1Q8IX03 1113 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 GAS2L2Q8NHY3 880 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 PPP4R2Q9NY27 417 aa17.81■□□□□ 0.44
HDAC6-215ENST00000465457 POLR2AP24928 1970 aaKnown RBP17.8■□□□□ 0.44
HDAC6-215ENST00000465457 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
HDAC6-215ENST00000465457 C3orf67Q6ZVT6 689 aa17.8■□□□□ 0.44
HDAC6-215ENST00000465457 PLEKHF1Q96S99 279 aa17.8■□□□□ 0.44
HDAC6-215ENST00000465457 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
HDAC6-215ENST00000465457 TAF1P21675 1872 aa17.79■□□□□ 0.44
HDAC6-215ENST00000465457 SHTN1A0MZ66 631 aa17.78■□□□□ 0.44
HDAC6-215ENST00000465457 CA12O43570 354 aa17.78■□□□□ 0.44
HDAC6-215ENST00000465457 GTF2E1P29083 439 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-215ENST00000465457 AOC3Q16853 763 aa17.78■□□□□ 0.44
HDAC6-215ENST00000465457 AKAP11Q9UKA4 1901 aa17.78■□□□□ 0.44
HDAC6-215ENST00000465457 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.44
HDAC6-215ENST00000465457 KDM3BQ7LBC6 1761 aa17.77■□□□□ 0.44
HDAC6-215ENST00000465457 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
HDAC6-215ENST00000465457 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms