RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
MRPL55-225ENST00000465268 DNAJC5GQ8N7S2 189 aa19.45■□□□□ 0.7
MRPL55-225ENST00000465268 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
MRPL55-225ENST00000465268 HOXA10P31260 410 aaPredicted RBP19.44■□□□□ 0.7
MRPL55-225ENST00000465268 FSTL1Q12841 308 aa19.44■□□□□ 0.7
MRPL55-225ENST00000465268 PARP10Q53GL7 1025 aa19.44■□□□□ 0.7
MRPL55-225ENST00000465268 NLRP10Q86W26 655 aa19.44■□□□□ 0.7
MRPL55-225ENST00000465268 UTP14AQ9BVJ6 771 aaKnown RBP19.44■□□□□ 0.7
MRPL55-225ENST00000465268 RIC1Q4ADV7 1423 aa19.43■□□□□ 0.7
MRPL55-225ENST00000465268 TCIRG1Q13488 830 aa19.43■□□□□ 0.7
MRPL55-225ENST00000465268 DPY19L2Q6NUT2 758 aa19.43■□□□□ 0.7
MRPL55-225ENST00000465268 PPP1R42Q7Z4L9 355 aa19.43■□□□□ 0.7
MRPL55-225ENST00000465268 NUP98P52948 1817 aa19.43■□□□□ 0.7
MRPL55-225ENST00000465268 TIAM2Q8IVF5 1701 aa19.42■□□□□ 0.7
MRPL55-225ENST00000465268 TCERG1O14776 1098 aaKnown RBP19.42■□□□□ 0.7
MRPL55-225ENST00000465268 SLC10A5Q5PT55 438 aa19.42■□□□□ 0.7
MRPL55-225ENST00000465268 RTKN2Q8IZC4 609 aa19.42■□□□□ 0.7
MRPL55-225ENST00000465268 RPGRQ92834 1020 aaKnown RBP19.42■□□□□ 0.7
MRPL55-225ENST00000465268 ZNF541Q9H0D2 1346 aa19.42■□□□□ 0.7
MRPL55-225ENST00000465268 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
MRPL55-225ENST00000465268 HOXB7P09629 217 aa19.41■□□□□ 0.7
MRPL55-225ENST00000465268 POTEIP0CG38 1075 aa19.41■□□□□ 0.7
MRPL55-225ENST00000465268 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
MRPL55-225ENST00000465268 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
MRPL55-225ENST00000465268 SMC1BQ8NDV3 1235 aa19.41■□□□□ 0.7
MRPL55-225ENST00000465268 ARFGEF2Q9Y6D5 1785 aa19.41■□□□□ 0.7
MRPL55-225ENST00000465268 C8orf58Q8NAV2 365 aa19.4■□□□□ 0.7
MRPL55-225ENST00000465268 RBM17Q96I25 401 aaKnown RBP19.4■□□□□ 0.7
MRPL55-225ENST00000465268 CRAMP1Q96RY5 1269 aa19.4■□□□□ 0.7
MRPL55-225ENST00000465268 IFT57Q9NWB7 429 aa19.4■□□□□ 0.7
MRPL55-225ENST00000465268 CACNA1SQ13698 1873 aa19.39■□□□□ 0.7
MRPL55-225ENST00000465268 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
MRPL55-225ENST00000465268 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
MRPL55-225ENST00000465268 NLRP3Q96P20 1036 aa19.39■□□□□ 0.69
MRPL55-225ENST00000465268 ATP5J2-PTCD1G3V325 749 aa19.38■□□□□ 0.69
MRPL55-225ENST00000465268 PPEF1O14829 653 aaPredicted RBP19.38■□□□□ 0.69
MRPL55-225ENST00000465268 COL4A5P29400 1685 aa19.38■□□□□ 0.69
MRPL55-225ENST00000465268 HSP90AB3PQ58FF7 597 aa19.38■□□□□ 0.69
MRPL55-225ENST00000465268 PLBD2Q8NHP8 589 aa19.38■□□□□ 0.69
MRPL55-225ENST00000465268 PSMD1Q99460 953 aa19.38■□□□□ 0.69
MRPL55-225ENST00000465268 DBF4Q9UBU7 674 aaPredicted RBP19.38■□□□□ 0.69
MRPL55-225ENST00000465268 TRMT112Q9UI30 125 aaKnown RBP19.38■□□□□ 0.69
MRPL55-225ENST00000465268 CCDC88AQ3V6T2 1871 aa19.37■□□□□ 0.69
MRPL55-225ENST00000465268 WDR90Q96KV7 1748 aa19.37■□□□□ 0.69
MRPL55-225ENST00000465268 ABCC4O15439 1325 aa19.37■□□□□ 0.69
MRPL55-225ENST00000465268 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
MRPL55-225ENST00000465268 GNAI1P63096 354 aa19.37■□□□□ 0.69
MRPL55-225ENST00000465268 ANKRD13DQ6ZTN6 518 aa19.37■□□□□ 0.69
MRPL55-225ENST00000465268 ISCA1Q9BUE6 129 aa19.37■□□□□ 0.69
MRPL55-225ENST00000465268 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
MRPL55-225ENST00000465268 FZD9O00144 591 aa19.36■□□□□ 0.69
MRPL55-225ENST00000465268 TSPYL6Q8N831 410 aa19.36■□□□□ 0.69
MRPL55-225ENST00000465268 L3MBTL3Q96JM7 780 aaPredicted RBP19.35■□□□□ 0.69
MRPL55-225ENST00000465268 HYPKQ9NX55 129 aa19.35■□□□□ 0.69
MRPL55-225ENST00000465268 SH3TC1Q8TE82 1336 aa19.34■□□□□ 0.69
MRPL55-225ENST00000465268 CC2D2BQ6DHV5 1058 aa19.34■□□□□ 0.69
MRPL55-225ENST00000465268 TSR2Q969E8 191 aaKnown RBP19.34■□□□□ 0.69
MRPL55-225ENST00000465268 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
MRPL55-225ENST00000465268 TAF1DQ9H5J8 278 aaPredicted RBP19.34■□□□□ 0.69
MRPL55-225ENST00000465268 ATP6V0A2Q9Y487 856 aa19.34■□□□□ 0.69
MRPL55-225ENST00000465268 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
MRPL55-225ENST00000465268 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.68
MRPL55-225ENST00000465268 DICER1Q9UPY3 1922 aaKnown RBP19.33■□□□□ 0.68
MRPL55-225ENST00000465268 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
MRPL55-225ENST00000465268 KLRG1Q96E93 195 aa19.32■□□□□ 0.68
MRPL55-225ENST00000465268 CHADLQ6NUI6 762 aa19.31■□□□□ 0.68
MRPL55-225ENST00000465268 WWC1Q8IX03 1113 aa19.31■□□□□ 0.68
MRPL55-225ENST00000465268 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
MRPL55-225ENST00000465268 AOC3Q16853 763 aa19.3■□□□□ 0.68
MRPL55-225ENST00000465268 RIC3Q7Z5B4 369 aa19.3■□□□□ 0.68
MRPL55-225ENST00000465268 LARGE2Q8N3Y3 721 aa19.3■□□□□ 0.68
MRPL55-225ENST00000465268 BBOX1O75936 387 aa19.29■□□□□ 0.68
MRPL55-225ENST00000465268 TRIM28Q13263 835 aaKnown RBP19.29■□□□□ 0.68
MRPL55-225ENST00000465268 GRAPQ13588 217 aa19.29■□□□□ 0.68
MRPL55-225ENST00000465268 CCDC27Q2M243 656 aa19.29■□□□□ 0.68
MRPL55-225ENST00000465268 DDX46Q7L014 1031 aaKnown RBP19.29■□□□□ 0.68
MRPL55-225ENST00000465268 SP8Q8IXZ3 490 aa19.29■□□□□ 0.68
MRPL55-225ENST00000465268 GRAPLQ8TC17 118 aaPredicted RBP19.29■□□□□ 0.68
MRPL55-225ENST00000465268 JDP2Q8WYK2 163 aa19.29■□□□□ 0.68
MRPL55-225ENST00000465268 JARID2Q92833 1246 aaPredicted RBP19.29■□□□□ 0.68
MRPL55-225ENST00000465268 MYD88Q99836 296 aa19.29■□□□□ 0.68
MRPL55-225ENST00000465268 COL4A1P02462 1669 aa19.28■□□□□ 0.68
MRPL55-225ENST00000465268 IQCA1LA6NCM1 817 aa19.28■□□□□ 0.68
MRPL55-225ENST00000465268 ANP32CO43423 234 aa19.28■□□□□ 0.68
MRPL55-225ENST00000465268 GPC2Q8N158 579 aa19.28■□□□□ 0.68
MRPL55-225ENST00000465268 CELF1Q92879 486 aaKnown RBP19.28■□□□□ 0.68
MRPL55-225ENST00000465268 RTFDC1Q9BY42 306 aaPredicted RBP19.28■□□□□ 0.68
MRPL55-225ENST00000465268 HACL1Q9UJ83 578 aa19.28■□□□□ 0.68
MRPL55-225ENST00000465268 GJA3Q9Y6H8 435 aa19.28■□□□□ 0.68
MRPL55-225ENST00000465268 PPIP5K2O43314 1243 aa19.27■□□□□ 0.68
MRPL55-225ENST00000465268 EPHX2P34913 555 aa19.27■□□□□ 0.68
MRPL55-225ENST00000465268 GOLGA2Q08379 1002 aa19.27■□□□□ 0.68
MRPL55-225ENST00000465268 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.68
MRPL55-225ENST00000465268 GRIPAP1Q4V328 841 aa19.27■□□□□ 0.68
MRPL55-225ENST00000465268 EAPPQ56P03 285 aaPredicted RBP19.27■□□□□ 0.68
MRPL55-225ENST00000465268 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
MRPL55-225ENST00000465268 ANKRD36CQ5JPF3 1778 aa19.27■□□□□ 0.67
MRPL55-225ENST00000465268 IRS4O14654 1257 aaPredicted RBP19.26■□□□□ 0.67
MRPL55-225ENST00000465268 EIF6P56537 245 aaKnown RBP19.26■□□□□ 0.67
MRPL55-225ENST00000465268 DPP8Q6V1X1 898 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms