RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ZNF784Q8NCA9 323 aaPredicted RBP24.14■■□□□ 1.45
LMNB1-204ENST00000463908 NOB1Q9ULX3 412 aaKnown RBP24.14■■□□□ 1.45
LMNB1-204ENST00000463908 GOLGB1Q14789 3259 aaKnown RBP24.13■■□□□ 1.45
LMNB1-204ENST00000463908 DPEP1P16444 411 aa24.13■■□□□ 1.45
LMNB1-204ENST00000463908 CWF19L2Q2TBE0 894 aaKnown RBP24.13■■□□□ 1.45
LMNB1-204ENST00000463908 IBTKQ9P2D0 1353 aaPredicted RBP24.13■■□□□ 1.45
LMNB1-204ENST00000463908 PTPRCP08575 1304 aa24.12■■□□□ 1.45
LMNB1-204ENST00000463908 KIF13BQ9NQT8 1826 aa24.12■■□□□ 1.45
LMNB1-204ENST00000463908 ANKRD36CQ5JPF3 1778 aa24.12■■□□□ 1.45
LMNB1-204ENST00000463908 GTF2E1P29083 439 aaPredicted RBP24.12■■□□□ 1.45
LMNB1-204ENST00000463908 CHRNA5P30532 468 aa24.12■■□□□ 1.45
LMNB1-204ENST00000463908 ST5P78524 1137 aa24.12■■□□□ 1.45
LMNB1-204ENST00000463908 SLC10A5Q5PT55 438 aa24.12■■□□□ 1.45
LMNB1-204ENST00000463908 CCDC191Q8NCU4 936 aa24.12■■□□□ 1.45
LMNB1-204ENST00000463908 TRMT112Q9UI30 125 aaKnown RBP24.12■■□□□ 1.45
LMNB1-204ENST00000463908 KLRG2A4D1S0 409 aaPredicted RBP24.11■■□□□ 1.45
LMNB1-204ENST00000463908 NEURL1BA8MQ27 555 aa24.11■■□□□ 1.45
LMNB1-204ENST00000463908 NPHP1O15259 732 aa24.11■■□□□ 1.45
LMNB1-204ENST00000463908 NEXNQ0ZGT2 675 aa24.11■■□□□ 1.45
LMNB1-204ENST00000463908 BEND3Q5T5X7 828 aa24.11■■□□□ 1.45
LMNB1-204ENST00000463908 ABCC12Q96J65 1359 aa24.11■■□□□ 1.45
LMNB1-204ENST00000463908 LINS1Q8NG48 757 aa24.1■■□□□ 1.45
LMNB1-204ENST00000463908 FAM89AQ96GI7 184 aa24.1■■□□□ 1.45
LMNB1-204ENST00000463908 CWC25Q9NXE8 425 aaPredicted RBP24.1■■□□□ 1.45
LMNB1-204ENST00000463908 PXDNLA1KZ92 1463 aa24.1■■□□□ 1.45
LMNB1-204ENST00000463908 PDE6BP35913 854 aa24.09■■□□□ 1.45
LMNB1-204ENST00000463908 JARID2Q92833 1246 aaPredicted RBP24.09■■□□□ 1.45
LMNB1-204ENST00000463908 KIAA1551Q9HCM1 1747 aa24.09■■□□□ 1.45
LMNB1-204ENST00000463908 C3orf67Q6ZVT6 689 aa24.08■■□□□ 1.45
LMNB1-204ENST00000463908 C2CD5Q86YS7 1000 aa24.08■■□□□ 1.45
LMNB1-204ENST00000463908 ZBTB38Q8NAP3 1195 aaPredicted RBP24.08■■□□□ 1.45
LMNB1-204ENST00000463908 ANKRD31Q8N7Z5 1873 aa24.08■■□□□ 1.45
LMNB1-204ENST00000463908 SH3TC1Q8TE82 1336 aa24.08■■□□□ 1.44
LMNB1-204ENST00000463908 HCLS1P14317 486 aaPredicted RBP24.07■■□□□ 1.44
LMNB1-204ENST00000463908 GCKRQ14397 625 aa24.07■■□□□ 1.44
LMNB1-204ENST00000463908 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
LMNB1-204ENST00000463908 SLC4A10Q6U841 1118 aa24.07■■□□□ 1.44
LMNB1-204ENST00000463908 ARHGAP45Q92619 1136 aa24.07■■□□□ 1.44
LMNB1-204ENST00000463908 RNF123Q5XPI4 1314 aa24.07■■□□□ 1.44
LMNB1-204ENST00000463908 H0YIN7 160 aa24.06■■□□□ 1.44
LMNB1-204ENST00000463908 PCCAP05165 728 aaPredicted RBP24.06■■□□□ 1.44
LMNB1-204ENST00000463908 H7C1W4 665 aa24.05■■□□□ 1.44
LMNB1-204ENST00000463908 SRGNP10124 158 aa24.05■■□□□ 1.44
LMNB1-204ENST00000463908 WWC3Q9ULE0 1092 aa24.05■■□□□ 1.44
LMNB1-204ENST00000463908 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
LMNB1-204ENST00000463908 PDZRN3Q9UPQ7 1066 aa24.04■■□□□ 1.44
LMNB1-204ENST00000463908 TNNQ9UQP3 1299 aa24.04■■□□□ 1.44
LMNB1-204ENST00000463908 RIC1Q4ADV7 1423 aa24.03■■□□□ 1.44
LMNB1-204ENST00000463908 CRY2Q49AN0 593 aa24.03■■□□□ 1.44
LMNB1-204ENST00000463908 FRAT1Q92837 279 aaPredicted RBP24.03■■□□□ 1.44
LMNB1-204ENST00000463908 API5Q9BZZ5 524 aaKnown RBP24.03■■□□□ 1.44
LMNB1-204ENST00000463908 SRCIN1Q9C0H9 1055 aa24.03■■□□□ 1.44
LMNB1-204ENST00000463908 KIF16BQ96L93 1317 aa24.03■■□□□ 1.44
LMNB1-204ENST00000463908 IRS4O14654 1257 aaPredicted RBP24.02■■□□□ 1.44
LMNB1-204ENST00000463908 ALDH1L1O75891 902 aa24.02■■□□□ 1.44
LMNB1-204ENST00000463908 CASP7P55210 303 aa24.02■■□□□ 1.44
LMNB1-204ENST00000463908 NLRP3Q96P20 1036 aa24.02■■□□□ 1.44
LMNB1-204ENST00000463908 PIM2Q9P1W9 311 aa24.02■■□□□ 1.44
LMNB1-204ENST00000463908 RCAN3Q9UKA8 241 aa24.02■■□□□ 1.44
LMNB1-204ENST00000463908 IPO8O15397 1037 aaKnown RBP24.01■■□□□ 1.43
LMNB1-204ENST00000463908 TRIM27P14373 513 aa24.01■■□□□ 1.43
LMNB1-204ENST00000463908 YBX3P16989 372 aaKnown RBP eCLIP24.01■■□□□ 1.43
LMNB1-204ENST00000463908 ATF7IPQ6VMQ6 1270 aa24.01■■□□□ 1.43
LMNB1-204ENST00000463908 TNRC6CQ9HCJ0 1690 aaKnown RBP24.01■■□□□ 1.43
LMNB1-204ENST00000463908 ZNF622Q969S3 477 aaKnown RBP eCLIP24■■□□□ 1.43
LMNB1-204ENST00000463908 MASTLQ96GX5 879 aa24■■□□□ 1.43
LMNB1-204ENST00000463908 NPR1P16066 1061 aa23.99■■□□□ 1.43
LMNB1-204ENST00000463908 STYK1Q6J9G0 422 aa23.99■■□□□ 1.43
LMNB1-204ENST00000463908 UBE3BQ7Z3V4 1068 aa23.99■■□□□ 1.43
LMNB1-204ENST00000463908 CDHR2Q9BYE9 1310 aa23.99■■□□□ 1.43
LMNB1-204ENST00000463908 HOXA10P31260 410 aaPredicted RBP23.98■■□□□ 1.43
LMNB1-204ENST00000463908 SF3B3Q15393 1217 aaKnown RBP23.98■■□□□ 1.43
LMNB1-204ENST00000463908 ZKSCAN2Q63HK3 967 aa23.98■■□□□ 1.43
LMNB1-204ENST00000463908 ABCC4O15439 1325 aa23.97■■□□□ 1.43
LMNB1-204ENST00000463908 GPR162Q16538 588 aa23.97■■□□□ 1.43
LMNB1-204ENST00000463908 DALRD3Q5D0E6 543 aaKnown RBP23.97■■□□□ 1.43
LMNB1-204ENST00000463908 TTLL6Q8N841 843 aa23.97■■□□□ 1.43
LMNB1-204ENST00000463908 BCS1LQ9Y276 419 aa23.97■■□□□ 1.43
LMNB1-204ENST00000463908 COL11A2P13942 1736 aaPredicted RBP23.96■■□□□ 1.43
LMNB1-204ENST00000463908 GRM8O00222 908 aa23.96■■□□□ 1.43
LMNB1-204ENST00000463908 INTS3Q68E01 1043 aaKnown RBP23.96■■□□□ 1.43
LMNB1-204ENST00000463908 PELP1Q8IZL8 1130 aaKnown RBP23.96■■□□□ 1.43
LMNB1-204ENST00000463908 CLUAP1Q96AJ1 413 aa23.96■■□□□ 1.43
LMNB1-204ENST00000463908 USP44Q9H0E7 712 aa23.96■■□□□ 1.43
LMNB1-204ENST00000463908 DDX60Q8IY21 1712 aaKnown RBP23.96■■□□□ 1.43
LMNB1-204ENST00000463908 UTYO14607 1347 aa23.95■■□□□ 1.42
LMNB1-204ENST00000463908 PDE8AO60658 829 aa23.95■■□□□ 1.42
LMNB1-204ENST00000463908 NBPF7P0C2Y1 421 aaPredicted RBP23.95■■□□□ 1.42
LMNB1-204ENST00000463908 CCT4P50991 539 aaKnown RBP23.95■■□□□ 1.42
LMNB1-204ENST00000463908 CNKSR1Q969H4 720 aa23.95■■□□□ 1.42
LMNB1-204ENST00000463908 C9orf78Q9NZ63 289 aaPredicted RBP23.95■■□□□ 1.42
LMNB1-204ENST00000463908 C1QTNF8P60827 252 aa23.94■■□□□ 1.42
LMNB1-204ENST00000463908 RPGRQ92834 1020 aaKnown RBP23.94■■□□□ 1.42
LMNB1-204ENST00000463908 CRAMP1Q96RY5 1269 aa23.94■■□□□ 1.42
LMNB1-204ENST00000463908 PLA2G12BQ9BX93 195 aa23.94■■□□□ 1.42
LMNB1-204ENST00000463908 BRCA1P38398 1863 aaKnown RBP23.94■■□□□ 1.42
LMNB1-204ENST00000463908 ALDH1B1P30837 517 aa23.93■■□□□ 1.42
LMNB1-204ENST00000463908 RBM17Q96I25 401 aaKnown RBP23.93■■□□□ 1.42
LMNB1-204ENST00000463908 KAZALD1Q96I82 304 aa23.93■■□□□ 1.42
LMNB1-204ENST00000463908 DLEC1Q9Y238 1755 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms