RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 CCDC191Q8NCU4 936 aa18.89■□□□□ 0.61
ABCF3-204ENST00000463685 GRM8O00222 908 aa18.88■□□□□ 0.61
ABCF3-204ENST00000463685 NBPF7P0C2Y1 421 aaPredicted RBP18.88■□□□□ 0.61
ABCF3-204ENST00000463685 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
ABCF3-204ENST00000463685 SUSD4Q5VX71 490 aa18.88■□□□□ 0.61
ABCF3-204ENST00000463685 ZBTB40Q9NUA8 1239 aa18.88■□□□□ 0.61
ABCF3-204ENST00000463685 C9orf78Q9NZ63 289 aaPredicted RBP18.88■□□□□ 0.61
ABCF3-204ENST00000463685 NFIXQ14938 502 aa18.87■□□□□ 0.61
ABCF3-204ENST00000463685 R3HDM1Q15032 1099 aaKnown RBP18.87■□□□□ 0.61
ABCF3-204ENST00000463685 QSER1Q2KHR3 1735 aa18.87■□□□□ 0.61
ABCF3-204ENST00000463685 SYNE4Q8N205 404 aa18.87■□□□□ 0.61
ABCF3-204ENST00000463685 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
ABCF3-204ENST00000463685 RGL2O15211 777 aa18.86■□□□□ 0.61
ABCF3-204ENST00000463685 UBE3BQ7Z3V4 1068 aa18.86■□□□□ 0.61
ABCF3-204ENST00000463685 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
ABCF3-204ENST00000463685 PSDA5PKW4 1024 aaPredicted RBP18.85■□□□□ 0.61
ABCF3-204ENST00000463685 UBTFL1P0CB47 393 aaPredicted RBP18.85■□□□□ 0.61
ABCF3-204ENST00000463685 FAM89AQ96GI7 184 aa18.85■□□□□ 0.61
ABCF3-204ENST00000463685 TRMT112Q9UI30 125 aaKnown RBP18.85■□□□□ 0.61
ABCF3-204ENST00000463685 UTYO14607 1347 aa18.84■□□□□ 0.61
ABCF3-204ENST00000463685 H7C1W4 665 aa18.84■□□□□ 0.61
ABCF3-204ENST00000463685 GNAI3P08754 354 aa18.84■□□□□ 0.61
ABCF3-204ENST00000463685 CASP7P55210 303 aa18.84■□□□□ 0.61
ABCF3-204ENST00000463685 PARP10Q53GL7 1025 aa18.84■□□□□ 0.61
ABCF3-204ENST00000463685 SUCLG2Q96I99 432 aa18.84■□□□□ 0.61
ABCF3-204ENST00000463685 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
ABCF3-204ENST00000463685 LRRFIP2Q9Y608 721 aaKnown RBP18.84■□□□□ 0.61
ABCF3-204ENST00000463685 NTSR2O95665 410 aa18.83■□□□□ 0.6
ABCF3-204ENST00000463685 TM4SF1P30408 202 aa18.83■□□□□ 0.6
ABCF3-204ENST00000463685 DDR1Q08345 913 aa18.83■□□□□ 0.6
ABCF3-204ENST00000463685 NUTM1Q86Y26 1132 aa18.83■□□□□ 0.6
ABCF3-204ENST00000463685 CCDC24Q8N4L8 307 aa18.83■□□□□ 0.6
ABCF3-204ENST00000463685 PCDHB15Q9Y5E8 787 aa18.83■□□□□ 0.6
ABCF3-204ENST00000463685 GNAI2P04899 355 aa18.82■□□□□ 0.6
ABCF3-204ENST00000463685 PCCAP05165 728 aaPredicted RBP18.82■□□□□ 0.6
ABCF3-204ENST00000463685 EPHA10Q5JZY3 1008 aa18.82■□□□□ 0.6
ABCF3-204ENST00000463685 NLGN1Q8N2Q7 840 aa18.82■□□□□ 0.6
ABCF3-204ENST00000463685 ZBTB38Q8NAP3 1195 aaPredicted RBP18.82■□□□□ 0.6
ABCF3-204ENST00000463685 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
ABCF3-204ENST00000463685 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
ABCF3-204ENST00000463685 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
ABCF3-204ENST00000463685 ERFEQ4G0M1 354 aa18.81■□□□□ 0.6
ABCF3-204ENST00000463685 PPP1R42Q7Z4L9 355 aa18.81■□□□□ 0.6
ABCF3-204ENST00000463685 NBPF5PQ86XG9 351 aaPredicted RBP18.81■□□□□ 0.6
ABCF3-204ENST00000463685 CHMP4BQ9H444 224 aaKnown RBP18.81■□□□□ 0.6
ABCF3-204ENST00000463685 CARMIL3Q8ND23 1372 aa18.81■□□□□ 0.6
ABCF3-204ENST00000463685 POLRMTO00411 1230 aaKnown RBP18.8■□□□□ 0.6
ABCF3-204ENST00000463685 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
ABCF3-204ENST00000463685 MMP10P09238 476 aa18.8■□□□□ 0.6
ABCF3-204ENST00000463685 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
ABCF3-204ENST00000463685 SH3TC1Q8TE82 1336 aa18.79■□□□□ 0.6
ABCF3-204ENST00000463685 IRS4O14654 1257 aaPredicted RBP18.79■□□□□ 0.6
ABCF3-204ENST00000463685 SERPINB2P05120 415 aa18.79■□□□□ 0.6
ABCF3-204ENST00000463685 BICC1Q9H694 974 aaKnown RBP18.79■□□□□ 0.6
ABCF3-204ENST00000463685 ABCC12Q96J65 1359 aa18.79■□□□□ 0.6
ABCF3-204ENST00000463685 CASZ1Q86V15 1759 aa18.78■□□□□ 0.6
ABCF3-204ENST00000463685 GTF2E1P29083 439 aaPredicted RBP18.78■□□□□ 0.6
ABCF3-204ENST00000463685 ANKRD44Q8N8A2 993 aa18.78■□□□□ 0.6
ABCF3-204ENST00000463685 NPHP1O15259 732 aa18.77■□□□□ 0.6
ABCF3-204ENST00000463685 FOXO4P98177 505 aa18.77■□□□□ 0.6
ABCF3-204ENST00000463685 ERICH6BQ5W0A0 696 aa18.77■□□□□ 0.6
ABCF3-204ENST00000463685 CEP85Q6P2H3 762 aa18.77■□□□□ 0.6
ABCF3-204ENST00000463685 SIRT2Q8IXJ6 389 aa18.77■□□□□ 0.6
ABCF3-204ENST00000463685 NYXQ9GZU5 481 aa18.77■□□□□ 0.6
ABCF3-204ENST00000463685 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
ABCF3-204ENST00000463685 CDHR2Q9BYE9 1310 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 AAMPQ13685 434 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 PRR5LQ6MZQ0 368 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 TPTE2Q6XPS3 522 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 C3orf67Q6ZVT6 689 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 CNBD1Q8NA66 436 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 CCDC85AQ96PX6 553 aaPredicted RBP18.76■□□□□ 0.59
ABCF3-204ENST00000463685 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 PARP3Q9Y6F1 533 aa18.76■□□□□ 0.59
ABCF3-204ENST00000463685 PNMA6EA0A0J9YXQ4 647 aa18.75■□□□□ 0.59
ABCF3-204ENST00000463685 SLC16A10Q8TF71 515 aa18.75■□□□□ 0.59
ABCF3-204ENST00000463685 DDX60Q8IY21 1712 aaKnown RBP18.74■□□□□ 0.59
ABCF3-204ENST00000463685 ATP8B2P98198 1209 aa18.74■□□□□ 0.59
ABCF3-204ENST00000463685 LMBR1LQ6UX01 489 aa18.74■□□□□ 0.59
ABCF3-204ENST00000463685 PLA2G12BQ9BX93 195 aa18.74■□□□□ 0.59
ABCF3-204ENST00000463685 PDE8AO60658 829 aa18.73■□□□□ 0.59
ABCF3-204ENST00000463685 IGHDP01880 384 aa18.73■□□□□ 0.59
ABCF3-204ENST00000463685 CTSWP56202 376 aa18.73■□□□□ 0.59
ABCF3-204ENST00000463685 HDAC5Q9UQL6 1122 aa18.73■□□□□ 0.59
ABCF3-204ENST00000463685 CHMP3Q9Y3E7 222 aa18.73■□□□□ 0.59
ABCF3-204ENST00000463685 RABL6Q3YEC7 729 aaPredicted RBP18.72■□□□□ 0.59
ABCF3-204ENST00000463685 SLC10A5Q5PT55 438 aa18.72■□□□□ 0.59
ABCF3-204ENST00000463685 CCDC136Q96JN2 1154 aa18.72■□□□□ 0.59
ABCF3-204ENST00000463685 MTFR1LQ9H019 292 aa18.72■□□□□ 0.59
ABCF3-204ENST00000463685 TNRC6CQ9HCJ0 1690 aaKnown RBP18.71■□□□□ 0.59
ABCF3-204ENST00000463685 SRGAP3O43295 1099 aa18.71■□□□□ 0.59
ABCF3-204ENST00000463685 ST5P78524 1137 aa18.71■□□□□ 0.59
ABCF3-204ENST00000463685 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
ABCF3-204ENST00000463685 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
ABCF3-204ENST00000463685 TTLL11Q8NHH1 800 aa18.71■□□□□ 0.59
ABCF3-204ENST00000463685 LAMB2P55268 1798 aa18.7■□□□□ 0.58
ABCF3-204ENST00000463685 CSF1RP07333 972 aa18.7■□□□□ 0.58
ABCF3-204ENST00000463685 GREM2Q9H772 168 aa18.7■□□□□ 0.58
ABCF3-204ENST00000463685 NRXN2Q9P2S2 1712 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms