RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ADCY9O60503 1353 aa24.26■■□□□ 1.47
COL9A3-203ENST00000462700 MIER1Q8N108 512 aa24.25■■□□□ 1.47
COL9A3-203ENST00000462700 RNF123Q5XPI4 1314 aa24.25■■□□□ 1.47
COL9A3-203ENST00000462700 TCERG1O14776 1098 aaKnown RBP24.24■■□□□ 1.47
COL9A3-203ENST00000462700 CRY2Q49AN0 593 aa24.24■■□□□ 1.47
COL9A3-203ENST00000462700 PRPF40BQ6NWY9 871 aaKnown RBP24.24■■□□□ 1.47
COL9A3-203ENST00000462700 RIC3Q7Z5B4 369 aa24.24■■□□□ 1.47
COL9A3-203ENST00000462700 ISCA1Q9BUE6 129 aa24.24■■□□□ 1.47
COL9A3-203ENST00000462700 ARFGEF2Q9Y6D5 1785 aa24.24■■□□□ 1.47
COL9A3-203ENST00000462700 VAMP4O75379 141 aa24.23■■□□□ 1.47
COL9A3-203ENST00000462700 C21orf2O43822 256 aa24.22■■□□□ 1.47
COL9A3-203ENST00000462700 DDX58O95786 925 aaKnown RBP24.22■■□□□ 1.47
COL9A3-203ENST00000462700 ATP5J2-PTCD1G3V325 749 aa24.21■■□□□ 1.47
COL9A3-203ENST00000462700 SLC10A5Q5PT55 438 aa24.21■■□□□ 1.47
COL9A3-203ENST00000462700 ZNF219Q9P2Y4 722 aaPredicted RBP24.21■■□□□ 1.47
COL9A3-203ENST00000462700 TRMT112Q9UI30 125 aaKnown RBP24.21■■□□□ 1.47
COL9A3-203ENST00000462700 SLC4A2P04920 1241 aa24.2■■□□□ 1.46
COL9A3-203ENST00000462700 RASSF7Q02833 373 aa24.2■■□□□ 1.46
COL9A3-203ENST00000462700 SH3TC1Q8TE82 1336 aa24.19■■□□□ 1.46
COL9A3-203ENST00000462700 ALDH1B1P30837 517 aa24.19■■□□□ 1.46
COL9A3-203ENST00000462700 TRIM28Q13263 835 aaKnown RBP24.19■■□□□ 1.46
COL9A3-203ENST00000462700 C9orf131Q5VYM1 1079 aa24.19■■□□□ 1.46
COL9A3-203ENST00000462700 C3orf67Q6ZVT6 689 aa24.19■■□□□ 1.46
COL9A3-203ENST00000462700 NFKBIEO00221 500 aa24.18■■□□□ 1.46
COL9A3-203ENST00000462700 G2E3Q7L622 706 aa24.18■■□□□ 1.46
COL9A3-203ENST00000462700 SYNE4Q8N205 404 aa24.18■■□□□ 1.46
COL9A3-203ENST00000462700 RPGRQ92834 1020 aaKnown RBP24.18■■□□□ 1.46
COL9A3-203ENST00000462700 ZNF428Q96B54 188 aa24.18■■□□□ 1.46
COL9A3-203ENST00000462700 NLRP3Q96P20 1036 aa24.18■■□□□ 1.46
COL9A3-203ENST00000462700 MYD88Q99836 296 aa24.18■■□□□ 1.46
COL9A3-203ENST00000462700 SLX4Q8IY92 1834 aa24.18■■□□□ 1.46
COL9A3-203ENST00000462700 E9PSI1 815 aa24.17■■□□□ 1.46
COL9A3-203ENST00000462700 HOXA10P31260 410 aaPredicted RBP24.17■■□□□ 1.46
COL9A3-203ENST00000462700 KSR2Q6VAB6 950 aa24.17■■□□□ 1.46
COL9A3-203ENST00000462700 C7orf43Q8WVR3 580 aa24.17■■□□□ 1.46
COL9A3-203ENST00000462700 METTL22Q9BUU2 404 aaPredicted RBP24.17■■□□□ 1.46
COL9A3-203ENST00000462700 MAP3K2Q9Y2U5 619 aa24.17■■□□□ 1.46
COL9A3-203ENST00000462700 CACNA1SQ13698 1873 aa24.16■■□□□ 1.46
COL9A3-203ENST00000462700 PI4KAP2A4QPH2 592 aa24.16■■□□□ 1.46
COL9A3-203ENST00000462700 HCLS1P14317 486 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-203ENST00000462700 SOGA3Q5TF21 947 aa24.16■■□□□ 1.46
COL9A3-203ENST00000462700 PI4KAP1Q8N8J0 262 aa24.16■■□□□ 1.46
COL9A3-203ENST00000462700 RNF181Q9P0P0 153 aa24.16■■□□□ 1.46
COL9A3-203ENST00000462700 FLIIQ13045 1269 aa24.15■■□□□ 1.46
COL9A3-203ENST00000462700 FAM89AQ96GI7 184 aa24.15■■□□□ 1.46
COL9A3-203ENST00000462700 LMNB1P20700 586 aa24.14■■□□□ 1.45
COL9A3-203ENST00000462700 PRELPP51888 382 aa24.14■■□□□ 1.45
COL9A3-203ENST00000462700 SLFN5Q08AF3 891 aa24.14■■□□□ 1.45
COL9A3-203ENST00000462700 RBM17Q96I25 401 aaKnown RBP24.14■■□□□ 1.45
COL9A3-203ENST00000462700 CCDC93Q567U6 631 aa24.13■■□□□ 1.45
COL9A3-203ENST00000462700 CCDC191Q8NCU4 936 aa24.13■■□□□ 1.45
COL9A3-203ENST00000462700 CRAMP1Q96RY5 1269 aa24.13■■□□□ 1.45
COL9A3-203ENST00000462700 LTBP3Q9NS15 1303 aa24.12■■□□□ 1.45
COL9A3-203ENST00000462700 FKBP5Q13451 457 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-203ENST00000462700 RTL5Q5HYW3 569 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-203ENST00000462700 OLFM4Q6UX06 510 aa24.11■■□□□ 1.45
COL9A3-203ENST00000462700 ZBTB38Q8NAP3 1195 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-203ENST00000462700 ZNF526Q8TF50 670 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-203ENST00000462700 CDCA7LQ96GN5 454 aa24.11■■□□□ 1.45
COL9A3-203ENST00000462700 TAOK3Q9H2K8 898 aa24.11■■□□□ 1.45
COL9A3-203ENST00000462700 CWC25Q9NXE8 425 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-203ENST00000462700 FER1L6Q2WGJ9 1857 aa24.11■■□□□ 1.45
COL9A3-203ENST00000462700 IGKV5-2P06315 115 aa24.1■■□□□ 1.45
COL9A3-203ENST00000462700 DDX60Q8IY21 1712 aaKnown RBP24.1■■□□□ 1.45
COL9A3-203ENST00000462700 ABCC4O15439 1325 aa24.1■■□□□ 1.45
COL9A3-203ENST00000462700 SBF1O95248 1867 aa24.09■■□□□ 1.45
COL9A3-203ENST00000462700 LAMB2P55268 1798 aa24.09■■□□□ 1.45
COL9A3-203ENST00000462700 NEXNQ0ZGT2 675 aa24.09■■□□□ 1.45
COL9A3-203ENST00000462700 GPBP1L1Q9HC44 474 aaPredicted RBP24.09■■□□□ 1.45
COL9A3-203ENST00000462700 IRS4O14654 1257 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-203ENST00000462700 PPEF1O14829 653 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-203ENST00000462700 PCCAP05165 728 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-203ENST00000462700 RTKN2Q8IZC4 609 aa24.08■■□□□ 1.45
COL9A3-203ENST00000462700 SNED1Q8TER0 1413 aa24.08■■□□□ 1.44
COL9A3-203ENST00000462700 ZC3H4Q9UPT8 1303 aaKnown RBP24.08■■□□□ 1.44
COL9A3-203ENST00000462700 TRMT2AQ8IZ69 625 aaKnown RBP24.07■■□□□ 1.44
COL9A3-203ENST00000462700 DNAAF4Q8WXU2 420 aa24.07■■□□□ 1.44
COL9A3-203ENST00000462700 FKBP4Q02790 459 aaKnown RBP eCLIP24.06■■□□□ 1.44
COL9A3-203ENST00000462700 SF3B3Q15393 1217 aaKnown RBP24.06■■□□□ 1.44
COL9A3-203ENST00000462700 CWF19L2Q2TBE0 894 aaKnown RBP24.06■■□□□ 1.44
COL9A3-203ENST00000462700 CC2D2BQ6DHV5 1058 aa24.06■■□□□ 1.44
COL9A3-203ENST00000462700 DDX46Q7L014 1031 aaKnown RBP24.06■■□□□ 1.44
COL9A3-203ENST00000462700 NEURL1BA8MQ27 555 aa24.05■■□□□ 1.44
COL9A3-203ENST00000462700 CACNA1FO60840 1977 aa24.04■■□□□ 1.44
COL9A3-203ENST00000462700 HSP90B1P14625 803 aaKnown RBP24.04■■□□□ 1.44
COL9A3-203ENST00000462700 GRAPQ13588 217 aa24.04■■□□□ 1.44
COL9A3-203ENST00000462700 SLC51AQ86UW1 340 aa24.04■■□□□ 1.44
COL9A3-203ENST00000462700 GRAPLQ8TC17 118 aaPredicted RBP24.04■■□□□ 1.44
COL9A3-203ENST00000462700 JARID2Q92833 1246 aaPredicted RBP24.04■■□□□ 1.44
COL9A3-203ENST00000462700 TIAM2Q8IVF5 1701 aa24.04■■□□□ 1.44
COL9A3-203ENST00000462700 CDHR2Q9BYE9 1310 aa24.03■■□□□ 1.44
COL9A3-203ENST00000462700 BBOX1O75936 387 aa24.02■■□□□ 1.44
COL9A3-203ENST00000462700 GRIPAP1Q4V328 841 aa24.02■■□□□ 1.44
COL9A3-203ENST00000462700 LINS1Q8NG48 757 aa24.02■■□□□ 1.44
COL9A3-203ENST00000462700 PSMD1Q99460 953 aa24.02■■□□□ 1.44
COL9A3-203ENST00000462700 ATP6V0A2Q9Y487 856 aa24.02■■□□□ 1.44
COL9A3-203ENST00000462700 F6X3S4 739 aa24.01■■□□□ 1.43
COL9A3-203ENST00000462700 PDE8AO60658 829 aa24.01■■□□□ 1.43
COL9A3-203ENST00000462700 ZNF277Q9NRM2 450 aaPredicted RBP24.01■■□□□ 1.43
COL9A3-203ENST00000462700 GCKRQ14397 625 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms