RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ATP5J2-PTCD1G3V325 749 aa15.16■□□□□ 0.02
COL4A6-204ENST00000461897 STARD3NLO95772 234 aa15.16■□□□□ 0.02
COL4A6-204ENST00000461897 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
COL4A6-204ENST00000461897 HDAC5Q9UQL6 1122 aa15.16■□□□□ 0.02
COL4A6-204ENST00000461897 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
COL4A6-204ENST00000461897 SALL3Q9BXA9 1300 aa15.15■□□□□ 0.02
COL4A6-204ENST00000461897 REC8O95072 547 aa15.15■□□□□ 0.02
COL4A6-204ENST00000461897 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
COL4A6-204ENST00000461897 ZBTB3Q9H5J0 574 aa15.15■□□□□ 0.02
COL4A6-204ENST00000461897 SURF6O75683 361 aaKnown RBP15.14■□□□□ 0.01
COL4A6-204ENST00000461897 A0A0G2JS52 829 aa15.14■□□□□ 0.01
COL4A6-204ENST00000461897 COL15A1P39059 1388 aa15.13■□□□□ 0.01
COL4A6-204ENST00000461897 KCNQ2O43526 872 aa15.13■□□□□ 0.01
COL4A6-204ENST00000461897 CASP7P55210 303 aa15.13■□□□□ 0.01
COL4A6-204ENST00000461897 EPHA10Q5JZY3 1008 aa15.13■□□□□ 0.01
COL4A6-204ENST00000461897 MEX3CQ5U5Q3 659 aaKnown RBP15.13■□□□□ 0.01
COL4A6-204ENST00000461897 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
COL4A6-204ENST00000461897 ZBTB1Q9Y2K1 713 aa15.13■□□□□ 0.01
COL4A6-204ENST00000461897 ZNF330Q9Y3S2 320 aaPredicted RBP15.13■□□□□ 0.01
COL4A6-204ENST00000461897 RREB1Q92766 1687 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 ERC2O15083 957 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 ST18O60284 1047 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 RAB11FIP3O75154 756 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 ZNF445P59923 1031 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 UBE3BQ7Z3V4 1068 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 JARID2Q92833 1246 aaPredicted RBP15.12■□□□□ 0.01
COL4A6-204ENST00000461897 ARXQ96QS3 562 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 AFF2P51816 1311 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 A0A087WZG4 1122 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 PDE1AP54750 535 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 PPP1R9BQ96SB3 815 aa15.12■□□□□ 0.01
COL4A6-204ENST00000461897 PALLDQ8WX93 1383 aa15.11■□□□□ 0.01
COL4A6-204ENST00000461897 ESPNB1AK53 854 aa15.11■□□□□ 0.01
COL4A6-204ENST00000461897 IL1RAPL2Q9NP60 686 aa15.11■□□□□ 0.01
COL4A6-204ENST00000461897 PA2G4Q9UQ80 394 aaKnown RBP15.11■□□□□ 0.01
COL4A6-204ENST00000461897 ATRNO75882 1429 aa15.11■□□□□ 0.01
COL4A6-204ENST00000461897 COL5A3P25940 1745 aaPredicted RBP15.1■□□□□ 0.01
COL4A6-204ENST00000461897 ANKRD36CQ5JPF3 1778 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 KIF1BPQ96EK5 621 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
COL4A6-204ENST00000461897 ZNF831Q5JPB2 1677 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 MYH14Q7Z406 1995 aaKnown RBP15.1■□□□□ 0.01
COL4A6-204ENST00000461897 LOC102724428A0A0B4J2F2 783 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 H7C1W4 665 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 MX1P20591 662 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 SIK1P57059 783 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 CCDC173Q0VFZ6 552 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 RABL6Q3YEC7 729 aaPredicted RBP15.1■□□□□ 0.01
COL4A6-204ENST00000461897 HSP90AB4PQ58FF6 505 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 TSHZ3Q63HK5 1081 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 KIF6Q6ZMV9 814 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 CCDC191Q8NCU4 936 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
COL4A6-204ENST00000461897 ISCA1Q9BUE6 129 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 LMBRD1Q9NUN5 540 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 MAP3K15Q6ZN16 1313 aa15.1■□□□□ 0.01
COL4A6-204ENST00000461897 NHSQ6T4R5 1651 aa15.09■□□□□ 0.01
COL4A6-204ENST00000461897 EPB41L2O43491 1005 aaKnown RBP15.09■□□□□ 0.01
COL4A6-204ENST00000461897 TCIRG1Q13488 830 aa15.09■□□□□ 0.01
COL4A6-204ENST00000461897 ITPK1Q13572 414 aa15.09■□□□□ 0.01
COL4A6-204ENST00000461897 DDX49Q9Y6V7 483 aaKnown RBP15.09■□□□□ 0.01
COL4A6-204ENST00000461897 ATP6V1AP38606 617 aa15.08■□□□□ 0.01
COL4A6-204ENST00000461897 MCM2P49736 904 aa15.08■□□□□ 0.01
COL4A6-204ENST00000461897 STAP2Q9UGK3 403 aa15.08■□□□□ 0.01
COL4A6-204ENST00000461897 BTAF1O14981 1849 aa15.08■□□□□ 0
COL4A6-204ENST00000461897 NUP98P52948 1817 aa15.08■□□□□ 0
COL4A6-204ENST00000461897 EP400Q96L91 3159 aa15.08■□□□□ 0
COL4A6-204ENST00000461897 IL6STP40189 918 aaPredicted RBP15.08■□□□□ 0
COL4A6-204ENST00000461897 INTS5Q6P9B9 1019 aaKnown RBP15.08■□□□□ 0
COL4A6-204ENST00000461897 AOX1Q06278 1338 aa15.07■□□□□ 0
COL4A6-204ENST00000461897 ANAPC15P60006 121 aa15.07■□□□□ 0
COL4A6-204ENST00000461897 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
COL4A6-204ENST00000461897 HLFQ16534 295 aa15.07■□□□□ 0
COL4A6-204ENST00000461897 GIGYF2Q6Y7W6 1299 aaKnown RBP15.07■□□□□ 0
COL4A6-204ENST00000461897 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
COL4A6-204ENST00000461897 KLHDC4Q8TBB5 520 aa15.07■□□□□ 0
COL4A6-204ENST00000461897 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
COL4A6-204ENST00000461897 CRKLP46109 303 aaKnown RBP15.06■□□□□ 0
COL4A6-204ENST00000461897 RFX5P48382 616 aaPredicted RBP15.06■□□□□ 0
COL4A6-204ENST00000461897 FOXO4P98177 505 aa15.06■□□□□ 0
COL4A6-204ENST00000461897 TRIM28Q13263 835 aaKnown RBP15.06■□□□□ 0
COL4A6-204ENST00000461897 NUTM1Q86Y26 1132 aa15.06■□□□□ 0
COL4A6-204ENST00000461897 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
COL4A6-204ENST00000461897 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
COL4A6-204ENST00000461897 AK9Q5TCS8 1911 aa15.06■□□□□ 0
COL4A6-204ENST00000461897 SASH1O94885 1247 aa15.06■□□□□ 0
COL4A6-204ENST00000461897 NASPP49321 788 aaPredicted RBP15.06■□□□□ 0
COL4A6-204ENST00000461897 EIF5P55010 431 aaKnown RBP15.06■□□□□ 0
COL4A6-204ENST00000461897 ERC1Q8IUD2 1116 aa15.06■□□□□ 0
COL4A6-204ENST00000461897 TRIM44Q96DX7 344 aaPredicted RBP15.06■□□□□ 0
COL4A6-204ENST00000461897 TRPC5Q9UL62 973 aaPredicted RBP15.06■□□□□ 0
COL4A6-204ENST00000461897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.06■□□□□ 0
COL4A6-204ENST00000461897 SBF2Q86WG5 1849 aa15.05■□□□□ 0
COL4A6-204ENST00000461897 ONECUT3O60422 494 aaPredicted RBP15.05■□□□□ -0
COL4A6-204ENST00000461897 CUL4AQ13619 759 aa15.05■□□□□ -0
COL4A6-204ENST00000461897 FAM182BQ5T319 152 aa15.05■□□□□ -0
COL4A6-204ENST00000461897 ESYT1Q9BSJ8 1104 aa15.05■□□□□ -0
COL4A6-204ENST00000461897 COPRSQ9NQ92 184 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms