RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 BBXQ8WY36 941 aaPredicted RBP16.95■□□□□ 0.3
NCL-207ENST00000461347 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
NCL-207ENST00000461347 TEX35Q5T0J7 233 aa16.95■□□□□ 0.3
NCL-207ENST00000461347 PHF8Q9UPP1 1060 aa16.95■□□□□ 0.3
NCL-207ENST00000461347 CCAR1Q8IX12 1150 aaKnown RBP16.95■□□□□ 0.3
NCL-207ENST00000461347 KIF18AQ8NI77 898 aa16.95■□□□□ 0.3
NCL-207ENST00000461347 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.95■□□□□ 0.33e-76■□□□□ 9.1
NCL-207ENST00000461347 V9GYY5 206 aaPredicted RBP16.95■□□□□ 0.3
NCL-207ENST00000461347 FAM227BQ96M60 508 aa16.94■□□□□ 0.3
NCL-207ENST00000461347 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
NCL-207ENST00000461347 QRICH2Q9H0J4 1663 aa16.94■□□□□ 0.3
NCL-207ENST00000461347 SFPQP23246 707 aaKnown RBP eCLIP16.94■□□□□ 0.3
NCL-207ENST00000461347 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
NCL-207ENST00000461347 CLEC17AQ6ZS10 378 aa16.94■□□□□ 0.3
NCL-207ENST00000461347 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
NCL-207ENST00000461347 GRM8O00222 908 aa16.94■□□□□ 0.3
NCL-207ENST00000461347 RIOK3O14730 519 aaKnown RBP16.93■□□□□ 0.3
NCL-207ENST00000461347 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
NCL-207ENST00000461347 UBE3BQ7Z3V4 1068 aa16.93■□□□□ 0.3
NCL-207ENST00000461347 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
NCL-207ENST00000461347 ERICH4A6NGS2 130 aa16.93■□□□□ 0.3
NCL-207ENST00000461347 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
NCL-207ENST00000461347 PTCD1O75127 700 aaKnown RBP16.93■□□□□ 0.3
NCL-207ENST00000461347 SAFBQ15424 915 aaKnown RBP eCLIP16.93■□□□□ 0.3
NCL-207ENST00000461347 SSH3Q8TE77 659 aa16.93■□□□□ 0.3
NCL-207ENST00000461347 HOOK1Q9UJC3 728 aaKnown RBP16.93■□□□□ 0.3
NCL-207ENST00000461347 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 CEP135Q66GS9 1140 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 LRRC59Q96AG4 307 aaKnown RBP16.92■□□□□ 0.3
NCL-207ENST00000461347 LRRC7Q96NW7 1537 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 STX1AQ16623 288 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 RAB11FIP4Q86YS3 637 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 HMG20BQ9P0W2 317 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 GOLIM4O00461 696 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 SKILP12757 684 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 CDC37L1Q7L3B6 337 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 RGS12O14924 1447 aa16.92■□□□□ 0.3
NCL-207ENST00000461347 AOX1Q06278 1338 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 A0A087WZG4 1122 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 HOXC9P31274 260 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 PTH1RQ03431 593 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 ISM2Q6H9L7 571 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 Q6ZUG5 572 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 CTAGE5O15320 804 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 CYP2E1P05181 493 aaPredicted RBP16.91■□□□□ 0.3
NCL-207ENST00000461347 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 TTC39AQ5SRH9 613 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 KCNH5Q8NCM2 988 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 KLHDC4Q8TBB5 520 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 AATKQ6ZMQ8 1374 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 CCDC66A2RUB6 948 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 POLR3DP05423 398 aaPredicted RBP16.91■□□□□ 0.3
NCL-207ENST00000461347 PIP4K2AP48426 406 aaPredicted RBP16.91■□□□□ 0.3
NCL-207ENST00000461347 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 CCDC158Q5M9N0 1113 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 PDLIM2Q96JY6 352 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
NCL-207ENST00000461347 ALDH1L1O75891 902 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 ME3Q16798 604 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 TTLL5Q6EMB2 1281 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 CEP126Q9P2H0 1117 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 TNRQ92752 1358 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 TPM1P09493 284 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 C8orf76Q96K31 380 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 MTMR6Q9Y217 621 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 CGNQ9P2M7 1197 aaKnown RBP16.9■□□□□ 0.3
NCL-207ENST00000461347 STAP2Q9UGK3 403 aa16.9■□□□□ 0.3
NCL-207ENST00000461347 AGLP35573 1532 aa16.89■□□□□ 0.3
NCL-207ENST00000461347 HAND2P61296 217 aa16.89■□□□□ 0.3
NCL-207ENST00000461347 UBXN4Q92575 508 aa16.89■□□□□ 0.3
NCL-207ENST00000461347 TSPOAP1O95153 1857 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 LIG1P18858 919 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 CABP4P57796 275 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 TMC6Q7Z403 805 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 GOLGA6L1Q8N7Z2 621 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 JMYQ8N9B5 988 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 LINS1Q8NG48 757 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 KIAA1210Q9ULL0 1709 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 IFIT1P09914 478 aaKnown RBP16.89■□□□□ 0.29
NCL-207ENST00000461347 ADCK5Q3MIX3 580 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 RRP12Q5JTH9 1297 aaKnown RBP16.89■□□□□ 0.29
NCL-207ENST00000461347 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
NCL-207ENST00000461347 ADGRB3O60242 1522 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 SSH2Q76I76 1423 aa16.89■□□□□ 0.29
NCL-207ENST00000461347 METP08581 1390 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 CBX8Q9HC52 389 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 SLC27A2O14975 620 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 U2AF2P26368 475 aaKnown RBP eCLIP16.88■□□□□ 0.291e-8■■■□□ 17.1
NCL-207ENST00000461347 GPS2Q13227 327 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 BCL2L12Q9HB09 334 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 SNRKQ9NRH2 765 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 PAXBP1Q9Y5B6 917 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms