RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 NBPF10Q6P3W6 841 aaKnown RBP9.66□□□□□ -0.86
ABCA4-202ENST00000460514 NBPF15Q8N660 670 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 BCL2L13Q9BXK5 485 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 API5Q9BZZ5 524 aaKnown RBP9.66□□□□□ -0.86
ABCA4-202ENST00000460514 TFCP2L1Q9NZI6 479 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 COL15A1P39059 1388 aa9.65□□□□□ -0.86
ABCA4-202ENST00000460514 RGL2O15211 777 aa9.65□□□□□ -0.86
ABCA4-202ENST00000460514 ZKSCAN2Q63HK3 967 aa9.65□□□□□ -0.86
ABCA4-202ENST00000460514 COPS6Q7L5N1 327 aa9.65□□□□□ -0.86
ABCA4-202ENST00000460514 XAGE3Q8WTP9 111 aa9.65□□□□□ -0.86
ABCA4-202ENST00000460514 FRAT1Q92837 279 aaPredicted RBP9.65□□□□□ -0.86
ABCA4-202ENST00000460514 ARXQ96QS3 562 aa9.65□□□□□ -0.86
ABCA4-202ENST00000460514 ZNF652Q9Y2D9 606 aa9.65□□□□□ -0.86
ABCA4-202ENST00000460514 NUP188Q5SRE5 1749 aa9.65□□□□□ -0.87
ABCA4-202ENST00000460514 MYH14Q7Z406 1995 aaKnown RBP9.64□□□□□ -0.87
ABCA4-202ENST00000460514 ERVV-1B6SEH8 477 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 ZPR1O75312 459 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 BCAR3O75815 825 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 ANXA1P04083 346 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 RFC4P35249 363 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 PIP4K2AP48426 406 aaPredicted RBP9.64□□□□□ -0.87
ABCA4-202ENST00000460514 AIMP1Q12904 312 aaKnown RBP9.64□□□□□ -0.87
ABCA4-202ENST00000460514 SLC15A2Q16348 729 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 PROSER3Q2NL68 480 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 RIC3Q7Z5B4 369 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
ABCA4-202ENST00000460514 PLBD2Q8NHP8 589 aa9.64□□□□□ -0.87
ABCA4-202ENST00000460514 CIZ1Q9ULV3 898 aaPredicted RBP9.64□□□□□ -0.87
ABCA4-202ENST00000460514 NOB1Q9ULX3 412 aaKnown RBP9.64□□□□□ -0.87
ABCA4-202ENST00000460514 MAP3K15Q6ZN16 1313 aa9.63□□□□□ -0.87
ABCA4-202ENST00000460514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
ABCA4-202ENST00000460514 PHF14O94880 888 aa9.63□□□□□ -0.87
ABCA4-202ENST00000460514 NEXNQ0ZGT2 675 aa9.63□□□□□ -0.87
ABCA4-202ENST00000460514 KSR2Q6VAB6 950 aa9.63□□□□□ -0.87
ABCA4-202ENST00000460514 ATF7IPQ6VMQ6 1270 aa9.63□□□□□ -0.87
ABCA4-202ENST00000460514 LRP10Q7Z4F1 713 aa9.63□□□□□ -0.87
ABCA4-202ENST00000460514 FTSJ3Q8IY81 847 aaKnown RBP9.63□□□□□ -0.87
ABCA4-202ENST00000460514 ZNF687Q8N1G0 1237 aa9.63□□□□□ -0.87
ABCA4-202ENST00000460514 PHAXQ9H814 394 aaKnown RBP9.63□□□□□ -0.87
ABCA4-202ENST00000460514 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
ABCA4-202ENST00000460514 RRP1P56182 461 aaKnown RBP9.62□□□□□ -0.87
ABCA4-202ENST00000460514 ZNF827Q17R98 1081 aa9.62□□□□□ -0.87
ABCA4-202ENST00000460514 CLEC4GQ6UXB4 293 aa9.62□□□□□ -0.87
ABCA4-202ENST00000460514 G2E3Q7L622 706 aa9.62□□□□□ -0.87
ABCA4-202ENST00000460514 DNAAF4Q8WXU2 420 aa9.62□□□□□ -0.87
ABCA4-202ENST00000460514 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
ABCA4-202ENST00000460514 NARFQ9UHQ1 456 aa9.62□□□□□ -0.87
ABCA4-202ENST00000460514 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
ABCA4-202ENST00000460514 QSER1Q2KHR3 1735 aa9.62□□□□□ -0.87
ABCA4-202ENST00000460514 PI4KAP2A4QPH2 592 aa9.61□□□□□ -0.87
ABCA4-202ENST00000460514 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
ABCA4-202ENST00000460514 TTLL7Q6ZT98 887 aa9.61□□□□□ -0.87
ABCA4-202ENST00000460514 DZIP1LQ8IYY4 767 aaKnown RBP9.61□□□□□ -0.87
ABCA4-202ENST00000460514 PI4KAP1Q8N8J0 262 aa9.61□□□□□ -0.87
ABCA4-202ENST00000460514 CHMP4BQ9H444 224 aaKnown RBP9.61□□□□□ -0.87
ABCA4-202ENST00000460514 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
ABCA4-202ENST00000460514 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
ABCA4-202ENST00000460514 MAP3K2Q9Y2U5 619 aa9.61□□□□□ -0.87
ABCA4-202ENST00000460514 SUPT16HQ9Y5B9 1047 aaKnown RBP9.61□□□□□ -0.87
ABCA4-202ENST00000460514 PXDNLA1KZ92 1463 aa9.6□□□□□ -0.87
ABCA4-202ENST00000460514 USP42Q9H9J4 1324 aaKnown RBP9.6□□□□□ -0.87
ABCA4-202ENST00000460514 SOCS7O14512 581 aa9.6□□□□□ -0.87
ABCA4-202ENST00000460514 CAMTA2O94983 1202 aa9.6□□□□□ -0.87
ABCA4-202ENST00000460514 TRIM27P14373 513 aa9.6□□□□□ -0.87
ABCA4-202ENST00000460514 CCT4P50991 539 aaKnown RBP9.6□□□□□ -0.87
ABCA4-202ENST00000460514 SLC4A10Q6U841 1118 aa9.6□□□□□ -0.87
ABCA4-202ENST00000460514 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
ABCA4-202ENST00000460514 SLC16A10Q8TF71 515 aa9.6□□□□□ -0.87
ABCA4-202ENST00000460514 METTL22Q9BUU2 404 aaPredicted RBP9.6□□□□□ -0.87
ABCA4-202ENST00000460514 ADCY9O60503 1353 aa9.6□□□□□ -0.87
ABCA4-202ENST00000460514 RNF123Q5XPI4 1314 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 PNPLA7Q6ZV29 1317 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 NEFLP07196 543 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 TCIRG1Q13488 830 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 DOK7Q18PE1 504 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 PARP10Q53GL7 1025 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 USPL1Q5W0Q7 1092 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
ABCA4-202ENST00000460514 NLGN1Q8N2Q7 840 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 LINS1Q8NG48 757 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 SRCIN1Q9C0H9 1055 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 C4AP0C0L4 1744 aa9.59□□□□□ -0.87
ABCA4-202ENST00000460514 ABCC4O15439 1325 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 SCN7AQ01118 1682 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 ATP10DQ9P241 1426 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 BCORQ6W2J9 1755 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 F6X3S4 739 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 ALDH1L1O75891 902 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
ABCA4-202ENST00000460514 CCDC191Q8NCU4 936 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 CLUAP1Q96AJ1 413 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 MYD88Q99836 296 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 SRP68Q9UHB9 627 aaKnown RBP9.58□□□□□ -0.88
ABCA4-202ENST00000460514 HDAC5Q9UQL6 1122 aa9.58□□□□□ -0.88
ABCA4-202ENST00000460514 TUBGCP6Q96RT7 1819 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms