RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 CC2D2BQ6DHV5 1058 aa16.98■□□□□ 0.31
PHF1-206ENST00000459809 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
PHF1-206ENST00000459809 NLRP3Q96P20 1036 aa16.98■□□□□ 0.31
PHF1-206ENST00000459809 CHPF2Q9P2E5 772 aa16.98■□□□□ 0.31
PHF1-206ENST00000459809 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
PHF1-206ENST00000459809 RIC1Q4ADV7 1423 aa16.97■□□□□ 0.31
PHF1-206ENST00000459809 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
PHF1-206ENST00000459809 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
PHF1-206ENST00000459809 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
PHF1-206ENST00000459809 ANKRD13DQ6ZTN6 518 aa16.97■□□□□ 0.31
PHF1-206ENST00000459809 RBM17Q96I25 401 aaKnown RBP16.97■□□□□ 0.31
PHF1-206ENST00000459809 CRAMP1Q96RY5 1269 aa16.97■□□□□ 0.31
PHF1-206ENST00000459809 ANKRD31Q8N7Z5 1873 aa16.97■□□□□ 0.31
PHF1-206ENST00000459809 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.31
PHF1-206ENST00000459809 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
PHF1-206ENST00000459809 FSTL1Q12841 308 aa16.95■□□□□ 0.3
PHF1-206ENST00000459809 NLRP10Q86W26 655 aa16.95■□□□□ 0.3
PHF1-206ENST00000459809 MRS2Q9HD23 443 aa16.95■□□□□ 0.3
PHF1-206ENST00000459809 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
PHF1-206ENST00000459809 PSMD1Q99460 953 aa16.93■□□□□ 0.3
PHF1-206ENST00000459809 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
PHF1-206ENST00000459809 TRMT112Q9UI30 125 aaKnown RBP16.93■□□□□ 0.3
PHF1-206ENST00000459809 APLP1P51693 650 aa16.92■□□□□ 0.3
PHF1-206ENST00000459809 TRIM28Q13263 835 aaKnown RBP16.92■□□□□ 0.3
PHF1-206ENST00000459809 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
PHF1-206ENST00000459809 SYNE4Q8N205 404 aa16.92■□□□□ 0.3
PHF1-206ENST00000459809 SH3TC1Q8TE82 1336 aa16.92■□□□□ 0.3
PHF1-206ENST00000459809 ELL2O00472 640 aaPredicted RBP16.91■□□□□ 0.3
PHF1-206ENST00000459809 BBOX1O75936 387 aa16.91■□□□□ 0.3
PHF1-206ENST00000459809 CCDC30Q5VVM6 783 aa16.91■□□□□ 0.3
PHF1-206ENST00000459809 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
PHF1-206ENST00000459809 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
PHF1-206ENST00000459809 SBF1O95248 1867 aa16.9■□□□□ 0.3
PHF1-206ENST00000459809 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
PHF1-206ENST00000459809 ZNF277Q9NRM2 450 aaPredicted RBP16.9■□□□□ 0.3
PHF1-206ENST00000459809 SLX4Q8IY92 1834 aa16.9■□□□□ 0.3
PHF1-206ENST00000459809 IL16Q14005 1332 aa16.9■□□□□ 0.3
PHF1-206ENST00000459809 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
PHF1-206ENST00000459809 NUP98P52948 1817 aa16.89■□□□□ 0.29
PHF1-206ENST00000459809 POTECB2RU33 542 aa16.89■□□□□ 0.29
PHF1-206ENST00000459809 IARSP41252 1262 aaKnown RBP16.89■□□□□ 0.29
PHF1-206ENST00000459809 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
PHF1-206ENST00000459809 OLFM4Q6UX06 510 aa16.89■□□□□ 0.29
PHF1-206ENST00000459809 C3orf67Q6ZVT6 689 aa16.89■□□□□ 0.29
PHF1-206ENST00000459809 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
PHF1-206ENST00000459809 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
PHF1-206ENST00000459809 PPEF1O14829 653 aaPredicted RBP16.88■□□□□ 0.29
PHF1-206ENST00000459809 HCLS1P14317 486 aaPredicted RBP16.88■□□□□ 0.29
PHF1-206ENST00000459809 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
PHF1-206ENST00000459809 JDP2Q8WYK2 163 aa16.88■□□□□ 0.29
PHF1-206ENST00000459809 ATP6V0A2Q9Y487 856 aa16.88■□□□□ 0.29
PHF1-206ENST00000459809 IQCA1LA6NCM1 817 aa16.87■□□□□ 0.29
PHF1-206ENST00000459809 FZD9O00144 591 aa16.87■□□□□ 0.29
PHF1-206ENST00000459809 DDNO94850 711 aaPredicted RBP16.87■□□□□ 0.29
PHF1-206ENST00000459809 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
PHF1-206ENST00000459809 DDX46Q7L014 1031 aaKnown RBP16.87■□□□□ 0.29
PHF1-206ENST00000459809 WDR63Q8IWG1 891 aa16.87■□□□□ 0.29
PHF1-206ENST00000459809 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
PHF1-206ENST00000459809 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
PHF1-206ENST00000459809 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
PHF1-206ENST00000459809 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
PHF1-206ENST00000459809 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
PHF1-206ENST00000459809 PHAXQ9H814 394 aaKnown RBP16.86■□□□□ 0.29
PHF1-206ENST00000459809 SF3B3Q15393 1217 aaKnown RBP16.85■□□□□ 0.29
PHF1-206ENST00000459809 TSPYL6Q8N831 410 aa16.85■□□□□ 0.29
PHF1-206ENST00000459809 SUPT20HQ8NEM7 779 aa16.85■□□□□ 0.29
PHF1-206ENST00000459809 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
PHF1-206ENST00000459809 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
PHF1-206ENST00000459809 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
PHF1-206ENST00000459809 ABCC4O15439 1325 aa16.85■□□□□ 0.29
PHF1-206ENST00000459809 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
PHF1-206ENST00000459809 GRAPQ13588 217 aa16.84■□□□□ 0.29
PHF1-206ENST00000459809 ZBTB38Q8NAP3 1195 aaPredicted RBP16.84■□□□□ 0.29
PHF1-206ENST00000459809 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
PHF1-206ENST00000459809 GRAPLQ8TC17 118 aaPredicted RBP16.84■□□□□ 0.29
PHF1-206ENST00000459809 ARFGEF2Q9Y6D5 1785 aa16.84■□□□□ 0.29
PHF1-206ENST00000459809 TWISTNBQ3B726 338 aaPredicted RBP16.83■□□□□ 0.28
PHF1-206ENST00000459809 GPC2Q8N158 579 aa16.83■□□□□ 0.28
PHF1-206ENST00000459809 LARGE2Q8N3Y3 721 aa16.83■□□□□ 0.28
PHF1-206ENST00000459809 SNED1Q8TER0 1413 aa16.83■□□□□ 0.28
PHF1-206ENST00000459809 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
PHF1-206ENST00000459809 RTFDC1Q9BY42 306 aaPredicted RBP16.83■□□□□ 0.28
PHF1-206ENST00000459809 TNRC6CQ9HCJ0 1690 aaKnown RBP16.82■□□□□ 0.28
PHF1-206ENST00000459809 IRS4O14654 1257 aaPredicted RBP16.82■□□□□ 0.28
PHF1-206ENST00000459809 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
PHF1-206ENST00000459809 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
PHF1-206ENST00000459809 DNAJC5GQ8N7S2 189 aa16.82■□□□□ 0.28
PHF1-206ENST00000459809 CHADLQ6NUI6 762 aa16.81■□□□□ 0.28
PHF1-206ENST00000459809 DPP8Q6V1X1 898 aaPredicted RBP16.81■□□□□ 0.28
PHF1-206ENST00000459809 MPNDQ8N594 471 aa16.81■□□□□ 0.28
PHF1-206ENST00000459809 MYD88Q99836 296 aa16.81■□□□□ 0.28
PHF1-206ENST00000459809 WDR90Q96KV7 1748 aa16.8■□□□□ 0.28
PHF1-206ENST00000459809 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
PHF1-206ENST00000459809 PCCAP05165 728 aaPredicted RBP16.8■□□□□ 0.28
PHF1-206ENST00000459809 PNMA8AQ86V59 439 aaPredicted RBP16.8■□□□□ 0.28
PHF1-206ENST00000459809 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
PHF1-206ENST00000459809 TAF1DQ9H5J8 278 aaPredicted RBP16.8■□□□□ 0.28
PHF1-206ENST00000459809 CWC25Q9NXE8 425 aaPredicted RBP16.8■□□□□ 0.28
PHF1-206ENST00000459809 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
PHF1-206ENST00000459809 ZNF541Q9H0D2 1346 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms