RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 CNKSR1Q969H4 720 aa15.36■□□□□ 0.05
TMEM56-202ENST00000455656 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
TMEM56-202ENST00000455656 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
TMEM56-202ENST00000455656 CACNA1FO60840 1977 aa15.36■□□□□ 0.05
TMEM56-202ENST00000455656 TAF1P21675 1872 aa15.35■□□□□ 0.05
TMEM56-202ENST00000455656 WDR63Q8IWG1 891 aa15.35■□□□□ 0.05
TMEM56-202ENST00000455656 ISCA1Q9BUE6 129 aa15.35■□□□□ 0.05
TMEM56-202ENST00000455656 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
TMEM56-202ENST00000455656 ZNF521Q96K83 1311 aa15.35■□□□□ 0.05
TMEM56-202ENST00000455656 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
TMEM56-202ENST00000455656 HSP90AB3PQ58FF7 597 aa15.34■□□□□ 0.05
TMEM56-202ENST00000455656 SLC10A5Q5PT55 438 aa15.34■□□□□ 0.05
TMEM56-202ENST00000455656 ANKRD13DQ6ZTN6 518 aa15.34■□□□□ 0.05
TMEM56-202ENST00000455656 PPP1R42Q7Z4L9 355 aa15.34■□□□□ 0.05
TMEM56-202ENST00000455656 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
TMEM56-202ENST00000455656 LTBP3Q9NS15 1303 aa15.34■□□□□ 0.05
TMEM56-202ENST00000455656 GTF2E1P29083 439 aaPredicted RBP15.33■□□□□ 0.04
TMEM56-202ENST00000455656 HOXA10P31260 410 aaPredicted RBP15.33■□□□□ 0.04
TMEM56-202ENST00000455656 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
TMEM56-202ENST00000455656 SYNE4Q8N205 404 aa15.33■□□□□ 0.04
TMEM56-202ENST00000455656 UTP14AQ9BVJ6 771 aaKnown RBP15.33■□□□□ 0.04
TMEM56-202ENST00000455656 RNF181Q9P0P0 153 aa15.33■□□□□ 0.04
TMEM56-202ENST00000455656 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
TMEM56-202ENST00000455656 COL4A1P02462 1669 aa15.32■□□□□ 0.04
TMEM56-202ENST00000455656 TWISTNBQ3B726 338 aaPredicted RBP15.32■□□□□ 0.04
TMEM56-202ENST00000455656 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
TMEM56-202ENST00000455656 ZNF526Q8TF50 670 aaPredicted RBP15.32■□□□□ 0.04
TMEM56-202ENST00000455656 KIF3CO14782 793 aa15.31■□□□□ 0.04
TMEM56-202ENST00000455656 LMNB1P20700 586 aa15.31■□□□□ 0.04
TMEM56-202ENST00000455656 CCDC30Q5VVM6 783 aa15.31■□□□□ 0.04
TMEM56-202ENST00000455656 GPBP1L1Q9HC44 474 aaPredicted RBP15.31■□□□□ 0.04
TMEM56-202ENST00000455656 LRRC37AA6NMS7 1700 aa15.3■□□□□ 0.04
TMEM56-202ENST00000455656 VAMP4O75379 141 aa15.3■□□□□ 0.04
TMEM56-202ENST00000455656 TRIM28Q13263 835 aaKnown RBP15.3■□□□□ 0.04
TMEM56-202ENST00000455656 ZNF428Q96B54 188 aa15.3■□□□□ 0.04
TMEM56-202ENST00000455656 SH3TC1Q8TE82 1336 aa15.29■□□□□ 0.04
TMEM56-202ENST00000455656 ZC3H4Q9UPT8 1303 aaKnown RBP15.29■□□□□ 0.04
TMEM56-202ENST00000455656 ATP5J2-PTCD1G3V325 749 aa15.29■□□□□ 0.04
TMEM56-202ENST00000455656 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
TMEM56-202ENST00000455656 ALDH1B1P30837 517 aa15.29■□□□□ 0.04
TMEM56-202ENST00000455656 C1QTNF8P60827 252 aa15.29■□□□□ 0.04
TMEM56-202ENST00000455656 G2E3Q7L622 706 aa15.29■□□□□ 0.04
TMEM56-202ENST00000455656 CRAMP1Q96RY5 1269 aa15.29■□□□□ 0.04
TMEM56-202ENST00000455656 CCER2I3L3R5 266 aa15.28■□□□□ 0.04
TMEM56-202ENST00000455656 HCLS1P14317 486 aaPredicted RBP15.28■□□□□ 0.04
TMEM56-202ENST00000455656 EXOSC9Q06265 439 aaKnown RBP15.28■□□□□ 0.04
TMEM56-202ENST00000455656 CCDC93Q567U6 631 aa15.28■□□□□ 0.04
TMEM56-202ENST00000455656 SOGA3Q5TF21 947 aa15.28■□□□□ 0.04
TMEM56-202ENST00000455656 NLRP3Q96P20 1036 aa15.28■□□□□ 0.04
TMEM56-202ENST00000455656 TAOK3Q9H2K8 898 aa15.28■□□□□ 0.04
TMEM56-202ENST00000455656 TRMT112Q9UI30 125 aaKnown RBP15.28■□□□□ 0.04
TMEM56-202ENST00000455656 WDR90Q96KV7 1748 aa15.28■□□□□ 0.04
TMEM56-202ENST00000455656 COL4A5P29400 1685 aa15.28■□□□□ 0.04
TMEM56-202ENST00000455656 GOLGA2Q08379 1002 aa15.27■□□□□ 0.04
TMEM56-202ENST00000455656 RIC3Q7Z5B4 369 aa15.27■□□□□ 0.04
TMEM56-202ENST00000455656 RPGRQ92834 1020 aaKnown RBP15.27■□□□□ 0.04
TMEM56-202ENST00000455656 NMRK2Q9NPI5 230 aa15.27■□□□□ 0.04
TMEM56-202ENST00000455656 ABCC4O15439 1325 aa15.26■□□□□ 0.03
TMEM56-202ENST00000455656 MYH3P11055 1940 aa15.26■□□□□ 0.03
TMEM56-202ENST00000455656 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
TMEM56-202ENST00000455656 MYD88Q99836 296 aa15.26■□□□□ 0.03
TMEM56-202ENST00000455656 METTL22Q9BUU2 404 aaPredicted RBP15.26■□□□□ 0.03
TMEM56-202ENST00000455656 CHMP4AQ9BY43 222 aa15.26■□□□□ 0.03
TMEM56-202ENST00000455656 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
TMEM56-202ENST00000455656 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
TMEM56-202ENST00000455656 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
TMEM56-202ENST00000455656 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
TMEM56-202ENST00000455656 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
TMEM56-202ENST00000455656 RBM17Q96I25 401 aaKnown RBP15.25■□□□□ 0.03
TMEM56-202ENST00000455656 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
TMEM56-202ENST00000455656 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
TMEM56-202ENST00000455656 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
TMEM56-202ENST00000455656 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
TMEM56-202ENST00000455656 MAP3K2Q9Y2U5 619 aa15.24■□□□□ 0.03
TMEM56-202ENST00000455656 GLTPD2A6NH11 291 aa15.23■□□□□ 0.03
TMEM56-202ENST00000455656 POTECB2RU33 542 aa15.23■□□□□ 0.03
TMEM56-202ENST00000455656 PPEF1O14829 653 aaPredicted RBP15.23■□□□□ 0.03
TMEM56-202ENST00000455656 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
TMEM56-202ENST00000455656 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
TMEM56-202ENST00000455656 RTKN2Q8IZC4 609 aa15.23■□□□□ 0.03
TMEM56-202ENST00000455656 ZBTB38Q8NAP3 1195 aaPredicted RBP15.23■□□□□ 0.03
TMEM56-202ENST00000455656 CCDC191Q8NCU4 936 aa15.23■□□□□ 0.03
TMEM56-202ENST00000455656 PSMD1Q99460 953 aa15.23■□□□□ 0.03
TMEM56-202ENST00000455656 MYH16Q9H6N6 1097 aa15.23■□□□□ 0.03
TMEM56-202ENST00000455656 PCCAP05165 728 aaPredicted RBP15.22■□□□□ 0.03
TMEM56-202ENST00000455656 FLIIQ13045 1269 aa15.22■□□□□ 0.03
TMEM56-202ENST00000455656 RTL5Q5HYW3 569 aaPredicted RBP15.22■□□□□ 0.03
TMEM56-202ENST00000455656 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
TMEM56-202ENST00000455656 ZNF277Q9NRM2 450 aaPredicted RBP15.22■□□□□ 0.03
TMEM56-202ENST00000455656 KDM2BQ8NHM5 1336 aa15.21■□□□□ 0.03
TMEM56-202ENST00000455656 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
TMEM56-202ENST00000455656 GRAPQ13588 217 aa15.21■□□□□ 0.03
TMEM56-202ENST00000455656 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.03
TMEM56-202ENST00000455656 CWC25Q9NXE8 425 aaPredicted RBP15.21■□□□□ 0.03
TMEM56-202ENST00000455656 ATP6V0A2Q9Y487 856 aa15.21■□□□□ 0.03
TMEM56-202ENST00000455656 SPEF2Q9C093 1822 aa15.2■□□□□ 0.02
TMEM56-202ENST00000455656 NEURL1BA8MQ27 555 aa15.2■□□□□ 0.02
TMEM56-202ENST00000455656 IARSP41252 1262 aaKnown RBP15.2■□□□□ 0.02
TMEM56-202ENST00000455656 SLFN5Q08AF3 891 aa15.2■□□□□ 0.02
TMEM56-202ENST00000455656 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms