RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ATG3Q9NT62 314 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 TMOD3Q9NYL9 352 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 UBR3Q6ZT12 1888 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 ANKRD26Q9UPS8 1709 aa6.42□□□□□ -1.38
GTF3C3-208ENST00000455546 SH3D19Q5HYK7 790 aa6.41□□□□□ -1.38
GTF3C3-208ENST00000455546 MYSM1Q5VVJ2 828 aa6.41□□□□□ -1.38
GTF3C3-208ENST00000455546 RDH13Q8NBN7 331 aa6.41□□□□□ -1.38
GTF3C3-208ENST00000455546 SLC4A9Q96Q91 983 aa6.41□□□□□ -1.38
GTF3C3-208ENST00000455546 HS3ST6Q96QI5 342 aa6.41□□□□□ -1.38
GTF3C3-208ENST00000455546 TMEM134Q9H6X4 195 aa6.41□□□□□ -1.38
GTF3C3-208ENST00000455546 C4BP0C0L5 1744 aa6.41□□□□□ -1.38
GTF3C3-208ENST00000455546 MAP3K5Q99683 1374 aa6.41□□□□□ -1.38
GTF3C3-208ENST00000455546 MYH14Q7Z406 1995 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-208ENST00000455546 CD46P15529 392 aa6.4□□□□□ -1.38
GTF3C3-208ENST00000455546 CABP4P57796 275 aa6.4□□□□□ -1.38
GTF3C3-208ENST00000455546 PLEKHO1Q53GL0 409 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-208ENST00000455546 SULT6B1Q6IMI4 303 aa6.4□□□□□ -1.38
GTF3C3-208ENST00000455546 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.38
GTF3C3-208ENST00000455546 TBC1D2Q9BYX2 928 aa6.4□□□□□ -1.38
GTF3C3-208ENST00000455546 KNSTRNQ9Y448 316 aa6.4□□□□□ -1.38
GTF3C3-208ENST00000455546 NCAPD2Q15021 1401 aa6.4□□□□□ -1.39
GTF3C3-208ENST00000455546 PTCD1O75127 700 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 IL13P35225 146 aa6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 MTHFSP49914 203 aa6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 CC2D1BQ5T0F9 858 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 TRAPPC3LQ5T215 181 aa6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 SWT1Q5T5J6 900 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 ZNF530Q6P9A1 599 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 NFATC2IPQ8NCF5 419 aa6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 CD2APQ9Y5K6 639 aa6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 IGSF1Q8N6C5 1336 aa6.39□□□□□ -1.39
GTF3C3-208ENST00000455546 ERVV-2B6SEH9 535 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 GRIN3BO60391 1043 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 RNF40O75150 1001 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 HMOX1P09601 288 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 SSFA2P28290 1259 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 C1QTNF8P60827 252 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 SKIV2LQ15477 1246 aaKnown RBP6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 CSPP1Q1MSJ5 1256 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 AMOTQ4VCS5 1084 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 ZNF687Q8N1G0 1237 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 SPIRE2Q8WWL2 714 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 DCAF5Q96JK2 942 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 LGR6Q9HBX8 967 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 RABGEF1Q9UJ41 708 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 KIF7Q2M1P5 1343 aa6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 VIRMAQ69YN4 1812 aaKnown RBP6.38□□□□□ -1.39
GTF3C3-208ENST00000455546 N4BP2Q86UW6 1770 aaPredicted RBP6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 PER1O15534 1290 aaPredicted RBP6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 HSP90AB1P08238 724 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 MMP10P09238 476 aa6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 HMGB2P26583 209 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 CLK2P49760 499 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 C1orf141Q5JVX7 400 aa6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 NUTM1Q86Y26 1132 aa6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 SULF1Q8IWU6 871 aa6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 ZNF526Q8TF50 670 aaPredicted RBP6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 RSPH6AQ9H0K4 717 aa6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 GOPCQ9HD26 462 aa6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 LIMD1Q9UGP4 676 aa6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 VPS9D1Q9Y2B5 631 aa6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 RTCBQ9Y3I0 505 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-208ENST00000455546 KDM6AO15550 1401 aaPredicted RBP6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 GOLGB1Q14789 3259 aaKnown RBP6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 SENP3-EIF4A1A0A087X0R7 540 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 A0A0G2JLW4 131 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 RPS6KA4O75676 772 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 NDUFV2P19404 249 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 RFC4P35249 363 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 PBX2P40425 430 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 SLC39A6Q13433 755 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 ERICH6Q7L0X2 663 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 SRP68Q9UHB9 627 aaKnown RBP6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 SCN11AQ9UI33 1791 aa6.36□□□□□ -1.39
GTF3C3-208ENST00000455546 MOXD2PA6NHM9 499 aa6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 RNMTO43148 476 aaKnown RBP6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 GIGYF1O75420 1035 aaPredicted RBP6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 SLC10A3P09131 477 aa6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 GYS1P13807 737 aa6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 CRKLP46109 303 aaKnown RBP6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 MTHFSDQ2M296 383 aaKnown RBP6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 RC3H1Q5TC82 1133 aaKnown RBP6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 SAMD7Q7Z3H4 446 aa6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 NLGN1Q8N2Q7 840 aa6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 HLA-CQ95604 372 aa6.35□□□□□ -1.39
GTF3C3-208ENST00000455546 KDRP35968 1356 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 COL5A3P25940 1745 aaPredicted RBP6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 DIAPH1O60610 1272 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 DPEP1P16444 411 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 GUCA2AQ02747 115 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 AKAP4Q5JQC9 854 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 INTS5Q6P9B9 1019 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 RIC3Q7Z5B4 369 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 DNAJC10Q8IXB1 793 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 SLC4A5Q9BY07 1137 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 SLC52A2Q9HAB3 445 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 BCS1LQ9Y276 419 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 PARP3Q9Y6F1 533 aa6.34□□□□□ -1.39
GTF3C3-208ENST00000455546 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms