RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 RIC3Q7Z5B4 369 aa32.06■■■□□ 2.72
MSH2-203ENST00000454849 RNF181Q9P0P0 153 aa32.06■■■□□ 2.72
MSH2-203ENST00000454849 ADCY9O60503 1353 aa32.06■■■□□ 2.72
MSH2-203ENST00000454849 TNRC6CQ9HCJ0 1690 aaKnown RBP32.05■■■□□ 2.72
MSH2-203ENST00000454849 SLX4Q8IY92 1834 aa32.05■■■□□ 2.72
MSH2-203ENST00000454849 HCLS1P14317 486 aaPredicted RBP32.04■■■□□ 2.72
MSH2-203ENST00000454849 PRELPP51888 382 aa32.04■■■□□ 2.72
MSH2-203ENST00000454849 GOLGA2Q08379 1002 aa32.04■■■□□ 2.72
MSH2-203ENST00000454849 DIEXFQ68CQ4 756 aaKnown RBP32.04■■■□□ 2.72
MSH2-203ENST00000454849 OLFM4Q6UX06 510 aa32.04■■■□□ 2.72
MSH2-203ENST00000454849 TRMT112Q9UI30 125 aaKnown RBP32.04■■■□□ 2.72
MSH2-203ENST00000454849 CCER2I3L3R5 266 aa32.03■■■□□ 2.72
MSH2-203ENST00000454849 NFKBIEO00221 500 aa32.02■■■□□ 2.72
MSH2-203ENST00000454849 RTL5Q5HYW3 569 aaPredicted RBP32.02■■■□□ 2.72
MSH2-203ENST00000454849 IBTKQ9P2D0 1353 aaPredicted RBP32.02■■■□□ 2.72
MSH2-203ENST00000454849 CACNA1SQ13698 1873 aa32.01■■■□□ 2.72
MSH2-203ENST00000454849 G2E3Q7L622 706 aa32.01■■■□□ 2.71
MSH2-203ENST00000454849 MIER1Q8N108 512 aa32.01■■■□□ 2.71
MSH2-203ENST00000454849 STK31Q9BXU1 1019 aa32.01■■■□□ 2.71
MSH2-203ENST00000454849 RPGRQ92834 1020 aaKnown RBP32■■■□□ 2.71
MSH2-203ENST00000454849 MYD88Q99836 296 aa32■■■□□ 2.71
MSH2-203ENST00000454849 ISCA1Q9BUE6 129 aa32■■■□□ 2.71
MSH2-203ENST00000454849 VAMP4O75379 141 aa31.99■■■□□ 2.71
MSH2-203ENST00000454849 SLC4A2P04920 1241 aa31.99■■■□□ 2.71
MSH2-203ENST00000454849 CRY2Q49AN0 593 aa31.99■■■□□ 2.71
MSH2-203ENST00000454849 SLC51AQ86UW1 340 aa31.98■■■□□ 2.71
MSH2-203ENST00000454849 FAM89AQ96GI7 184 aa31.98■■■□□ 2.71
MSH2-203ENST00000454849 MYH16Q9H6N6 1097 aa31.98■■■□□ 2.71
MSH2-203ENST00000454849 GPBP1L1Q9HC44 474 aaPredicted RBP31.98■■■□□ 2.71
MSH2-203ENST00000454849 ANKRD36CQ5JPF3 1778 aa31.97■■■□□ 2.71
MSH2-203ENST00000454849 SLC10A5Q5PT55 438 aa31.97■■■□□ 2.71
MSH2-203ENST00000454849 C7orf43Q8WVR3 580 aa31.97■■■□□ 2.71
MSH2-203ENST00000454849 NLRP3Q96P20 1036 aa31.97■■■□□ 2.71
MSH2-203ENST00000454849 CHMP4AQ9BY43 222 aa31.97■■■□□ 2.71
MSH2-203ENST00000454849 ZNF521Q96K83 1311 aa31.97■■■□□ 2.71
MSH2-203ENST00000454849 SH3TC1Q8TE82 1336 aa31.96■■■□□ 2.71
MSH2-203ENST00000454849 LMNB1P20700 586 aa31.95■■■□□ 2.71
MSH2-203ENST00000454849 ALDH1B1P30837 517 aa31.95■■■□□ 2.71
MSH2-203ENST00000454849 JARID2Q92833 1246 aaPredicted RBP31.95■■■□□ 2.71
MSH2-203ENST00000454849 MAP3K2Q9Y2U5 619 aa31.95■■■□□ 2.71
MSH2-203ENST00000454849 DDX58O95786 925 aaKnown RBP31.94■■■□□ 2.7
MSH2-203ENST00000454849 RBM17Q96I25 401 aaKnown RBP31.94■■■□□ 2.7
MSH2-203ENST00000454849 SBF1O95248 1867 aa31.93■■■□□ 2.7
MSH2-203ENST00000454849 PI4KAP2A4QPH2 592 aa31.93■■■□□ 2.7
MSH2-203ENST00000454849 PI4KAP1Q8N8J0 262 aa31.93■■■□□ 2.7
MSH2-203ENST00000454849 ARFGEF2Q9Y6D5 1785 aa31.93■■■□□ 2.7
MSH2-203ENST00000454849 HOXA10P31260 410 aaPredicted RBP31.92■■■□□ 2.7
MSH2-203ENST00000454849 KSR2Q6VAB6 950 aa31.91■■■□□ 2.7
MSH2-203ENST00000454849 METTL22Q9BUU2 404 aaPredicted RBP31.91■■■□□ 2.7
MSH2-203ENST00000454849 TAOK3Q9H2K8 898 aa31.91■■■□□ 2.7
MSH2-203ENST00000454849 RIC1Q4ADV7 1423 aa31.91■■■□□ 2.7
MSH2-203ENST00000454849 TRIM28Q13263 835 aaKnown RBP31.9■■■□□ 2.7
MSH2-203ENST00000454849 CCDC93Q567U6 631 aa31.9■■■□□ 2.7
MSH2-203ENST00000454849 RNF123Q5XPI4 1314 aa31.89■■■□□ 2.7
MSH2-203ENST00000454849 SOGA3Q5TF21 947 aa31.88■■■□□ 2.69
MSH2-203ENST00000454849 CDCA7LQ96GN5 454 aa31.88■■■□□ 2.69
MSH2-203ENST00000454849 CRAMP1Q96RY5 1269 aa31.88■■■□□ 2.69
MSH2-203ENST00000454849 FLIIQ13045 1269 aa31.87■■■□□ 2.69
MSH2-203ENST00000454849 NMRK2Q9NPI5 230 aa31.87■■■□□ 2.69
MSH2-203ENST00000454849 ABCC4O15439 1325 aa31.86■■■□□ 2.69
MSH2-203ENST00000454849 PPEF1O14829 653 aaPredicted RBP31.86■■■□□ 2.69
MSH2-203ENST00000454849 ZNF277Q9NRM2 450 aaPredicted RBP31.86■■■□□ 2.69
MSH2-203ENST00000454849 FER1L6Q2WGJ9 1857 aa31.86■■■□□ 2.69
MSH2-203ENST00000454849 CCDC88AQ3V6T2 1871 aa31.86■■■□□ 2.69
MSH2-203ENST00000454849 IRS4O14654 1257 aaPredicted RBP31.85■■■□□ 2.69
MSH2-203ENST00000454849 FKBP5Q13451 457 aaPredicted RBP31.85■■■□□ 2.69
MSH2-203ENST00000454849 CWC25Q9NXE8 425 aaPredicted RBP31.85■■■□□ 2.69
MSH2-203ENST00000454849 IGKV5-2P06315 115 aa31.84■■■□□ 2.69
MSH2-203ENST00000454849 CWF19L2Q2TBE0 894 aaKnown RBP31.84■■■□□ 2.69
MSH2-203ENST00000454849 RTKN2Q8IZC4 609 aa31.83■■■□□ 2.69
MSH2-203ENST00000454849 ZBTB38Q8NAP3 1195 aaPredicted RBP31.83■■■□□ 2.69
MSH2-203ENST00000454849 CCDC191Q8NCU4 936 aa31.83■■■□□ 2.69
MSH2-203ENST00000454849 LTBP3Q9NS15 1303 aa31.82■■■□□ 2.68
MSH2-203ENST00000454849 FKBP4Q02790 459 aaKnown RBP eCLIP31.82■■■□□ 2.68
MSH2-203ENST00000454849 SLFN5Q08AF3 891 aa31.82■■■□□ 2.68
MSH2-203ENST00000454849 DDX46Q7L014 1031 aaKnown RBP31.82■■■□□ 2.68
MSH2-203ENST00000454849 LAMB2P55268 1798 aa31.81■■■□□ 2.68
MSH2-203ENST00000454849 E9PSI1 815 aa31.81■■■□□ 2.68
MSH2-203ENST00000454849 C1QTNF8P60827 252 aa31.81■■■□□ 2.68
MSH2-203ENST00000454849 KIF3CO14782 793 aa31.8■■■□□ 2.68
MSH2-203ENST00000454849 NEXNQ0ZGT2 675 aa31.8■■■□□ 2.68
MSH2-203ENST00000454849 F6X3S4 739 aa31.79■■■□□ 2.68
MSH2-203ENST00000454849 PCCAP05165 728 aaPredicted RBP31.79■■■□□ 2.68
MSH2-203ENST00000454849 CCDC85AQ96PX6 553 aaPredicted RBP31.79■■■□□ 2.68
MSH2-203ENST00000454849 RRAGCQ9HB90 399 aa31.79■■■□□ 2.68
MSH2-203ENST00000454849 DDX60Q8IY21 1712 aaKnown RBP31.78■■■□□ 2.68
MSH2-203ENST00000454849 TAF1P21675 1872 aa31.78■■■□□ 2.68
MSH2-203ENST00000454849 NEURL1BA8MQ27 555 aa31.77■■■□□ 2.68
MSH2-203ENST00000454849 DNAAF4Q8WXU2 420 aa31.77■■■□□ 2.68
MSH2-203ENST00000454849 KDM2BQ8NHM5 1336 aa31.76■■■□□ 2.68
MSH2-203ENST00000454849 GRAPQ13588 217 aa31.76■■■□□ 2.67
MSH2-203ENST00000454849 SF3B3Q15393 1217 aaKnown RBP31.76■■■□□ 2.67
MSH2-203ENST00000454849 GRAPLQ8TC17 118 aaPredicted RBP31.76■■■□□ 2.67
MSH2-203ENST00000454849 ATP6V0A2Q9Y487 856 aa31.76■■■□□ 2.67
MSH2-203ENST00000454849 BBOX1O75936 387 aa31.75■■■□□ 2.67
MSH2-203ENST00000454849 CELF1Q92879 486 aaKnown RBP31.75■■■□□ 2.67
MSH2-203ENST00000454849 GLTPD2A6NH11 291 aa31.74■■■□□ 2.67
MSH2-203ENST00000454849 CC2D2BQ6DHV5 1058 aa31.74■■■□□ 2.67
MSH2-203ENST00000454849 TIAM2Q8IVF5 1701 aa31.74■■■□□ 2.67
MSH2-203ENST00000454849 SNED1Q8TER0 1413 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms