RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CCDC102AQ96A19 550 aa17.18■□□□□ 0.34
AC004540.1-204ENST00000449537 ZNF652Q9Y2D9 606 aa17.18■□□□□ 0.34
AC004540.1-204ENST00000449537 PKN2Q16513 984 aaKnown RBP17.17■□□□□ 0.34
AC004540.1-204ENST00000449537 COL4A5P29400 1685 aa17.16■□□□□ 0.34
AC004540.1-204ENST00000449537 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
AC004540.1-204ENST00000449537 FAM155AB1AL88 458 aaPredicted RBP17.16■□□□□ 0.34
AC004540.1-204ENST00000449537 GTF2E1P29083 439 aaPredicted RBP17.16■□□□□ 0.34
AC004540.1-204ENST00000449537 IL13P35225 146 aa17.16■□□□□ 0.34
AC004540.1-204ENST00000449537 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
AC004540.1-204ENST00000449537 BCORQ6W2J9 1755 aa17.15■□□□□ 0.34
AC004540.1-204ENST00000449537 SNED1Q8TER0 1413 aa17.15■□□□□ 0.34
AC004540.1-204ENST00000449537 NIP7Q9Y221 180 aaKnown RBP eCLIP17.15■□□□□ 0.34
AC004540.1-204ENST00000449537 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.33
AC004540.1-204ENST00000449537 HIRAP54198 1017 aaPredicted RBP17.14■□□□□ 0.33
AC004540.1-204ENST00000449537 CXCL9Q07325 125 aa17.14■□□□□ 0.33
AC004540.1-204ENST00000449537 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
AC004540.1-204ENST00000449537 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
AC004540.1-204ENST00000449537 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
AC004540.1-204ENST00000449537 UBR2Q8IWV8 1755 aa17.14■□□□□ 0.33
AC004540.1-204ENST00000449537 PPIP5K2O43314 1243 aa17.13■□□□□ 0.33
AC004540.1-204ENST00000449537 ZNF157P51786 506 aaPredicted RBP17.13■□□□□ 0.33
AC004540.1-204ENST00000449537 C2orf69Q8N8R5 385 aa17.13■□□□□ 0.33
AC004540.1-204ENST00000449537 AKAP11Q9UKA4 1901 aa17.13■□□□□ 0.33
AC004540.1-204ENST00000449537 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
AC004540.1-204ENST00000449537 FXR1P51114 621 aaKnown RBP eCLIP17.12■□□□□ 0.33
AC004540.1-204ENST00000449537 TEFQ10587 303 aa17.12■□□□□ 0.33
AC004540.1-204ENST00000449537 CSRNP1Q96S65 589 aa17.12■□□□□ 0.33
AC004540.1-204ENST00000449537 BCL2L13Q9BXK5 485 aa17.12■□□□□ 0.33
AC004540.1-204ENST00000449537 HDAC9Q9UKV0 1011 aa17.12■□□□□ 0.33
AC004540.1-204ENST00000449537 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
AC004540.1-204ENST00000449537 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
AC004540.1-204ENST00000449537 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
AC004540.1-204ENST00000449537 VPS33BQ9H267 617 aa17.11■□□□□ 0.33
AC004540.1-204ENST00000449537 GBA2Q9HCG7 927 aaPredicted RBP17.11■□□□□ 0.33
AC004540.1-204ENST00000449537 HMOX1P09601 288 aa17.1■□□□□ 0.33
AC004540.1-204ENST00000449537 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
AC004540.1-204ENST00000449537 AOC3Q16853 763 aa17.1■□□□□ 0.33
AC004540.1-204ENST00000449537 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
AC004540.1-204ENST00000449537 RPGRQ92834 1020 aaKnown RBP17.1■□□□□ 0.33
AC004540.1-204ENST00000449537 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
AC004540.1-204ENST00000449537 RGL2O15211 777 aa17.09■□□□□ 0.33
AC004540.1-204ENST00000449537 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
AC004540.1-204ENST00000449537 DLK2Q6UY11 383 aa17.09■□□□□ 0.33
AC004540.1-204ENST00000449537 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
AC004540.1-204ENST00000449537 TMX4Q9H1E5 349 aaPredicted RBP17.09■□□□□ 0.33
AC004540.1-204ENST00000449537 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
AC004540.1-204ENST00000449537 CDHR2Q9BYE9 1310 aa17.08■□□□□ 0.32
AC004540.1-204ENST00000449537 H7C1D1 291 aa17.08■□□□□ 0.32
AC004540.1-204ENST00000449537 TNIP1Q15025 636 aa17.08■□□□□ 0.32
AC004540.1-204ENST00000449537 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
AC004540.1-204ENST00000449537 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.32
AC004540.1-204ENST00000449537 DLL1O00548 723 aa17.07■□□□□ 0.32
AC004540.1-204ENST00000449537 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
AC004540.1-204ENST00000449537 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
AC004540.1-204ENST00000449537 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
AC004540.1-204ENST00000449537 PPEF1O14829 653 aaPredicted RBP17.06■□□□□ 0.32
AC004540.1-204ENST00000449537 SLC10A3P09131 477 aa17.06■□□□□ 0.32
AC004540.1-204ENST00000449537 FBXO46Q6PJ61 603 aaPredicted RBP17.06■□□□□ 0.32
AC004540.1-204ENST00000449537 KRT26Q7Z3Y9 468 aa17.06■□□□□ 0.32
AC004540.1-204ENST00000449537 NYXQ9GZU5 481 aa17.06■□□□□ 0.32
AC004540.1-204ENST00000449537 KIF7Q2M1P5 1343 aa17.05■□□□□ 0.32
AC004540.1-204ENST00000449537 RAD17O75943 681 aa17.05■□□□□ 0.32
AC004540.1-204ENST00000449537 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
AC004540.1-204ENST00000449537 NUTM1Q86Y26 1132 aa17.05■□□□□ 0.32
AC004540.1-204ENST00000449537 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
AC004540.1-204ENST00000449537 ZNF296Q8WUU4 475 aaPredicted RBP17.05■□□□□ 0.32
AC004540.1-204ENST00000449537 KCNQ3O43525 872 aa17.04■□□□□ 0.32
AC004540.1-204ENST00000449537 HLFQ16534 295 aa17.04■□□□□ 0.32
AC004540.1-204ENST00000449537 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
AC004540.1-204ENST00000449537 SLC51AQ86UW1 340 aa17.03■□□□□ 0.32
AC004540.1-204ENST00000449537 DCPSQ96C86 337 aaKnown RBP17.03■□□□□ 0.32
AC004540.1-204ENST00000449537 PANK3Q9H999 370 aa17.03■□□□□ 0.32
AC004540.1-204ENST00000449537 SHTN1A0MZ66 631 aa17.02■□□□□ 0.32
AC004540.1-204ENST00000449537 BTBD11A6QL63 1104 aa17.02■□□□□ 0.32
AC004540.1-204ENST00000449537 MICALL2Q8IY33 904 aa17.02■□□□□ 0.32
AC004540.1-204ENST00000449537 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
AC004540.1-204ENST00000449537 POLR2AP24928 1970 aaKnown RBP17.01■□□□□ 0.31
AC004540.1-204ENST00000449537 TBC1D8O95759 1140 aa17.01■□□□□ 0.31
AC004540.1-204ENST00000449537 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
AC004540.1-204ENST00000449537 RTFDC1Q9BY42 306 aaPredicted RBP17.01■□□□□ 0.31
AC004540.1-204ENST00000449537 ABCC12Q96J65 1359 aa17.01■□□□□ 0.31
AC004540.1-204ENST00000449537 PRAMEF22A3QJZ6 481 aa17■□□□□ 0.31
AC004540.1-204ENST00000449537 NBPF26B4DH59 902 aa17■□□□□ 0.31
AC004540.1-204ENST00000449537 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
AC004540.1-204ENST00000449537 NBPF10Q6P3W6 841 aaKnown RBP17■□□□□ 0.31
AC004540.1-204ENST00000449537 DPF2Q92785 391 aa17■□□□□ 0.31
AC004540.1-204ENST00000449537 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
AC004540.1-204ENST00000449537 GPR25O00155 361 aa16.99■□□□□ 0.31
AC004540.1-204ENST00000449537 KIAA2012Q0VF49 1180 aa16.99■□□□□ 0.31
AC004540.1-204ENST00000449537 TBC1D10BQ4KMP7 808 aaPredicted RBP16.98■□□□□ 0.31
AC004540.1-204ENST00000449537 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
AC004540.1-204ENST00000449537 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
AC004540.1-204ENST00000449537 RASAL3Q86YV0 1011 aa16.98■□□□□ 0.31
AC004540.1-204ENST00000449537 SLC17A8Q8NDX2 589 aa16.98■□□□□ 0.31
AC004540.1-204ENST00000449537 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
AC004540.1-204ENST00000449537 COLQQ9Y215 455 aaPredicted RBP16.98■□□□□ 0.31
AC004540.1-204ENST00000449537 NOM1Q5C9Z4 860 aaKnown RBP16.97■□□□□ 0.31
AC004540.1-204ENST00000449537 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
AC004540.1-204ENST00000449537 MPNDQ8N594 471 aa16.97■□□□□ 0.31
AC004540.1-204ENST00000449537 ZBTB12Q9Y330 459 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms