RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
RFC4-210ENST00000449502 NIP7Q9Y221 180 aaKnown RBP eCLIP11.95□□□□□ -0.5
RFC4-210ENST00000449502 ITGB4P16144 1822 aa11.95□□□□□ -0.5
RFC4-210ENST00000449502 CACNA1FO60840 1977 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
RFC4-210ENST00000449502 NPHP1O15259 732 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 PHF14O94880 888 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 ADRA2BP18089 450 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 GTF2E1P29083 439 aaPredicted RBP11.94□□□□□ -0.5
RFC4-210ENST00000449502 CASP7P55210 303 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
RFC4-210ENST00000449502 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 RABL6Q3YEC7 729 aaPredicted RBP11.94□□□□□ -0.5
RFC4-210ENST00000449502 ZNF34Q8IZ26 560 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 CLASRPQ8N2M8 674 aaKnown RBP11.94□□□□□ -0.5
RFC4-210ENST00000449502 FAM89AQ96GI7 184 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 RGS17Q9UGC6 210 aaPredicted RBP11.94□□□□□ -0.5
RFC4-210ENST00000449502 NOP58Q9Y2X3 529 aaKnown RBP11.94□□□□□ -0.5
RFC4-210ENST00000449502 NHSQ6T4R5 1651 aa11.94□□□□□ -0.5
RFC4-210ENST00000449502 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
RFC4-210ENST00000449502 EPHA10Q5JZY3 1008 aa11.93□□□□□ -0.5
RFC4-210ENST00000449502 RHPN1Q8TCX5 695 aa11.93□□□□□ -0.5
RFC4-210ENST00000449502 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
RFC4-210ENST00000449502 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
RFC4-210ENST00000449502 NARFQ9UHQ1 456 aa11.93□□□□□ -0.5
RFC4-210ENST00000449502 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 CDHR2Q9BYE9 1310 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 IFIT2P09913 472 aaKnown RBP11.92□□□□□ -0.5
RFC4-210ENST00000449502 FOXO4P98177 505 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 SUSD4Q5VX71 490 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 USPL1Q5W0Q7 1092 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 BICDL1Q6ZP65 573 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 SETDB2Q96T68 719 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 PLA2G12BQ9BX93 195 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 NYXQ9GZU5 481 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 SIL1Q9H173 461 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 IL1RAPL2Q9NP60 686 aa11.92□□□□□ -0.5
RFC4-210ENST00000449502 PA2G4Q9UQ80 394 aaKnown RBP11.92□□□□□ -0.5
RFC4-210ENST00000449502 PLSCR1O15162 318 aa11.91□□□□□ -0.5
RFC4-210ENST00000449502 PDE8AO60658 829 aa11.91□□□□□ -0.5
RFC4-210ENST00000449502 EIF5BO60841 1220 aaKnown RBP11.91□□□□□ -0.5
RFC4-210ENST00000449502 IFIT5Q13325 482 aaKnown RBP11.91□□□□□ -0.5
RFC4-210ENST00000449502 CASC1Q6TDU7 716 aa11.91□□□□□ -0.5
RFC4-210ENST00000449502 PLEKHM2Q8IWE5 1019 aa11.91□□□□□ -0.5
RFC4-210ENST00000449502 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
RFC4-210ENST00000449502 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
RFC4-210ENST00000449502 BACH2Q9BYV9 841 aa11.91□□□□□ -0.5
RFC4-210ENST00000449502 UPF2Q9HAU5 1272 aaKnown RBP11.91□□□□□ -0.5
RFC4-210ENST00000449502 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
RFC4-210ENST00000449502 LRRC4BQ9NT99 713 aa11.91□□□□□ -0.5
RFC4-210ENST00000449502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
RFC4-210ENST00000449502 ANKRD18BA2A2Z9 1011 aa11.9□□□□□ -0.5
RFC4-210ENST00000449502 MSH5O43196 834 aa11.9□□□□□ -0.5
RFC4-210ENST00000449502 MX1P20591 662 aa11.9□□□□□ -0.5
RFC4-210ENST00000449502 SSFA2P28290 1259 aa11.9□□□□□ -0.5
RFC4-210ENST00000449502 CTSWP56202 376 aa11.9□□□□□ -0.5
RFC4-210ENST00000449502 TJP1Q07157 1748 aa11.9□□□□□ -0.5
RFC4-210ENST00000449502 BMP2KLQ5H9B9 411 aa11.9□□□□□ -0.5
RFC4-210ENST00000449502 CCDC85AQ96PX6 553 aaPredicted RBP11.9□□□□□ -0.5
RFC4-210ENST00000449502 SRP68Q9UHB9 627 aaKnown RBP11.9□□□□□ -0.5
RFC4-210ENST00000449502 UBN2Q6ZU65 1347 aa11.89□□□□□ -0.51
RFC4-210ENST00000449502 TTC22Q5TAA0 569 aa11.89□□□□□ -0.51
RFC4-210ENST00000449502 AACSQ86V21 672 aa11.89□□□□□ -0.51
RFC4-210ENST00000449502 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
RFC4-210ENST00000449502 TFCP2L1Q9NZI6 479 aa11.89□□□□□ -0.51
RFC4-210ENST00000449502 USP42Q9H9J4 1324 aaKnown RBP11.88□□□□□ -0.51
RFC4-210ENST00000449502 KAT6BQ8WYB5 2073 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 ERC2O15083 957 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 IL15P40933 162 aaPredicted RBP11.88□□□□□ -0.51
RFC4-210ENST00000449502 RFX5P48382 616 aaPredicted RBP11.88□□□□□ -0.51
RFC4-210ENST00000449502 PDE1AP54750 535 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 PTPN12Q05209 780 aaKnown RBP11.88□□□□□ -0.51
RFC4-210ENST00000449502 CCDC152Q4G0S7 254 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 SMIM5Q71RC9 77 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 NUTM1Q86Y26 1132 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 FLAD1Q8NFF5 587 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
RFC4-210ENST00000449502 EYA2O00167 538 aa11.87□□□□□ -0.51
RFC4-210ENST00000449502 CIAO1O76071 339 aa11.87□□□□□ -0.51
RFC4-210ENST00000449502 NTSR2O95665 410 aa11.87□□□□□ -0.51
RFC4-210ENST00000449502 CSF1RP07333 972 aa11.87□□□□□ -0.51
RFC4-210ENST00000449502 HCLS1P14317 486 aaPredicted RBP11.87□□□□□ -0.51
RFC4-210ENST00000449502 ITGA6P23229 1130 aa11.87□□□□□ -0.51
RFC4-210ENST00000449502 C8orf34Q49A92 452 aa11.87□□□□□ -0.51
RFC4-210ENST00000449502 TTLL11Q8NHH1 800 aa11.87□□□□□ -0.51
RFC4-210ENST00000449502 OTUD7AQ8TE49 926 aaPredicted RBP11.87□□□□□ -0.51
RFC4-210ENST00000449502 CEP126Q9P2H0 1117 aa11.87□□□□□ -0.51
RFC4-210ENST00000449502 RBM19Q9Y4C8 960 aaKnown RBP11.87□□□□□ -0.51
RFC4-210ENST00000449502 N4BP2Q86UW6 1770 aaPredicted RBP11.87□□□□□ -0.51
RFC4-210ENST00000449502 AOX1Q06278 1338 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
RFC4-210ENST00000449502 BTAF1O14981 1849 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 IGHMBP2P38935 993 aaKnown RBP11.86□□□□□ -0.51
RFC4-210ENST00000449502 BAG6P46379 1132 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms