RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 SOGA3Q5TF21 947 aa24.35■■□□□ 1.49
LRRC42-204ENST00000444987 NLRP10Q86W26 655 aa24.35■■□□□ 1.49
LRRC42-204ENST00000444987 ABCC12Q96J65 1359 aa24.34■■□□□ 1.49
LRRC42-204ENST00000444987 ALDH1B1P30837 517 aa24.34■■□□□ 1.49
LRRC42-204ENST00000444987 TRIM28Q13263 835 aaKnown RBP24.34■■□□□ 1.49
LRRC42-204ENST00000444987 NUTM1Q86Y26 1132 aa24.34■■□□□ 1.49
LRRC42-204ENST00000444987 TNRC6CQ9HCJ0 1690 aaKnown RBP24.34■■□□□ 1.49
LRRC42-204ENST00000444987 RIC3Q7Z5B4 369 aa24.33■■□□□ 1.49
LRRC42-204ENST00000444987 ISCA1Q9BUE6 129 aa24.33■■□□□ 1.49
LRRC42-204ENST00000444987 PHAXQ9H814 394 aaKnown RBP24.33■■□□□ 1.49
LRRC42-204ENST00000444987 CACNA1SQ13698 1873 aa24.32■■□□□ 1.48
LRRC42-204ENST00000444987 SLX4Q8IY92 1834 aa24.32■■□□□ 1.48
LRRC42-204ENST00000444987 SBF1O95248 1867 aa24.32■■□□□ 1.48
LRRC42-204ENST00000444987 VAMP4O75379 141 aa24.31■■□□□ 1.48
LRRC42-204ENST00000444987 PRPF40BQ6NWY9 871 aaKnown RBP24.31■■□□□ 1.48
LRRC42-204ENST00000444987 NLRP3Q96P20 1036 aa24.31■■□□□ 1.48
LRRC42-204ENST00000444987 FER1L6Q2WGJ9 1857 aa24.3■■□□□ 1.48
LRRC42-204ENST00000444987 HOXA10P31260 410 aaPredicted RBP24.3■■□□□ 1.48
LRRC42-204ENST00000444987 EXOSC9Q06265 439 aaKnown RBP24.3■■□□□ 1.48
LRRC42-204ENST00000444987 SPINK5Q9NQ38 1064 aaPredicted RBP24.3■■□□□ 1.48
LRRC42-204ENST00000444987 SH3TC1Q8TE82 1336 aa24.3■■□□□ 1.48
LRRC42-204ENST00000444987 TRMT112Q9UI30 125 aaKnown RBP24.29■■□□□ 1.48
LRRC42-204ENST00000444987 C21orf2O43822 256 aa24.28■■□□□ 1.48
LRRC42-204ENST00000444987 SLC4A2P04920 1241 aa24.28■■□□□ 1.48
LRRC42-204ENST00000444987 RPGRQ92834 1020 aaKnown RBP24.28■■□□□ 1.48
LRRC42-204ENST00000444987 LTBP3Q9NS15 1303 aa24.28■■□□□ 1.48
LRRC42-204ENST00000444987 ZC3H4Q9UPT8 1303 aaKnown RBP24.28■■□□□ 1.48
LRRC42-204ENST00000444987 E9PSI1 815 aa24.27■■□□□ 1.48
LRRC42-204ENST00000444987 KSR2Q6VAB6 950 aa24.27■■□□□ 1.48
LRRC42-204ENST00000444987 C7orf43Q8WVR3 580 aa24.27■■□□□ 1.48
LRRC42-204ENST00000444987 RBM17Q96I25 401 aaKnown RBP24.27■■□□□ 1.48
LRRC42-204ENST00000444987 CRAMP1Q96RY5 1269 aa24.27■■□□□ 1.48
LRRC42-204ENST00000444987 LMNB1P20700 586 aa24.26■■□□□ 1.47
LRRC42-204ENST00000444987 C9orf131Q5VYM1 1079 aa24.26■■□□□ 1.47
LRRC42-204ENST00000444987 CCDC191Q8NCU4 936 aa24.26■■□□□ 1.47
LRRC42-204ENST00000444987 METTL22Q9BUU2 404 aaPredicted RBP24.26■■□□□ 1.47
LRRC42-204ENST00000444987 HSP90B1P14625 803 aaKnown RBP24.25■■□□□ 1.47
LRRC42-204ENST00000444987 GRIPAP1Q4V328 841 aa24.25■■□□□ 1.47
LRRC42-204ENST00000444987 LAMB2P55268 1798 aa24.24■■□□□ 1.47
LRRC42-204ENST00000444987 ATP5J2-PTCD1G3V325 749 aa24.24■■□□□ 1.47
LRRC42-204ENST00000444987 NFKBIEO00221 500 aa24.24■■□□□ 1.47
LRRC42-204ENST00000444987 CCDC93Q567U6 631 aa24.24■■□□□ 1.47
LRRC42-204ENST00000444987 CC2D2BQ6DHV5 1058 aa24.24■■□□□ 1.47
LRRC42-204ENST00000444987 RNF181Q9P0P0 153 aa24.24■■□□□ 1.47
LRRC42-204ENST00000444987 RTKN2Q8IZC4 609 aa24.23■■□□□ 1.47
LRRC42-204ENST00000444987 MIER1Q8N108 512 aa24.23■■□□□ 1.47
LRRC42-204ENST00000444987 MYD88Q99836 296 aa24.23■■□□□ 1.47
LRRC42-204ENST00000444987 DDX60Q8IY21 1712 aaKnown RBP24.23■■□□□ 1.47
LRRC42-204ENST00000444987 CCDC88AQ3V6T2 1871 aa24.22■■□□□ 1.47
LRRC42-204ENST00000444987 PI4KAP2A4QPH2 592 aa24.22■■□□□ 1.47
LRRC42-204ENST00000444987 RASSF7Q02833 373 aa24.22■■□□□ 1.47
LRRC42-204ENST00000444987 NEXNQ0ZGT2 675 aa24.22■■□□□ 1.47
LRRC42-204ENST00000444987 FLIIQ13045 1269 aa24.22■■□□□ 1.47
LRRC42-204ENST00000444987 PI4KAP1Q8N8J0 262 aa24.22■■□□□ 1.47
LRRC42-204ENST00000444987 ZBTB38Q8NAP3 1195 aaPredicted RBP24.22■■□□□ 1.47
LRRC42-204ENST00000444987 TAOK3Q9H2K8 898 aa24.22■■□□□ 1.47
LRRC42-204ENST00000444987 MAP3K2Q9Y2U5 619 aa24.22■■□□□ 1.47
LRRC42-204ENST00000444987 DICER1Q9UPY3 1922 aaKnown RBP24.22■■□□□ 1.47
LRRC42-204ENST00000444987 SLFN5Q08AF3 891 aa24.21■■□□□ 1.47
LRRC42-204ENST00000444987 GPBP1L1Q9HC44 474 aaPredicted RBP24.21■■□□□ 1.47
LRRC42-204ENST00000444987 CWC25Q9NXE8 425 aaPredicted RBP24.21■■□□□ 1.47
LRRC42-204ENST00000444987 ZNF219Q9P2Y4 722 aaPredicted RBP24.21■■□□□ 1.47
LRRC42-204ENST00000444987 TCERG1O14776 1098 aaKnown RBP24.2■■□□□ 1.46
LRRC42-204ENST00000444987 ZNF428Q96B54 188 aa24.2■■□□□ 1.46
LRRC42-204ENST00000444987 FAM89AQ96GI7 184 aa24.2■■□□□ 1.46
LRRC42-204ENST00000444987 PCCAP05165 728 aaPredicted RBP24.19■■□□□ 1.46
LRRC42-204ENST00000444987 HCLS1P14317 486 aaPredicted RBP24.19■■□□□ 1.46
LRRC42-204ENST00000444987 C3orf67Q6ZVT6 689 aa24.19■■□□□ 1.46
LRRC42-204ENST00000444987 G2E3Q7L622 706 aa24.19■■□□□ 1.46
LRRC42-204ENST00000444987 FKBP4Q02790 459 aaKnown RBP eCLIP24.18■■□□□ 1.46
LRRC42-204ENST00000444987 FKBP5Q13451 457 aaPredicted RBP24.18■■□□□ 1.46
LRRC42-204ENST00000444987 SF3B3Q15393 1217 aaKnown RBP24.18■■□□□ 1.46
LRRC42-204ENST00000444987 SYNE4Q8N205 404 aa24.18■■□□□ 1.46
LRRC42-204ENST00000444987 TIAM2Q8IVF5 1701 aa24.18■■□□□ 1.46
LRRC42-204ENST00000444987 BBOX1O75936 387 aa24.17■■□□□ 1.46
LRRC42-204ENST00000444987 DDX46Q7L014 1031 aaKnown RBP24.17■■□□□ 1.46
LRRC42-204ENST00000444987 TMC4Q7Z404 712 aa24.17■■□□□ 1.46
LRRC42-204ENST00000444987 TMX4Q9H1E5 349 aaPredicted RBP24.17■■□□□ 1.46
LRRC42-204ENST00000444987 IRS4O14654 1257 aaPredicted RBP24.16■■□□□ 1.46
LRRC42-204ENST00000444987 PPEF1O14829 653 aaPredicted RBP24.16■■□□□ 1.46
LRRC42-204ENST00000444987 PRELPP51888 382 aa24.16■■□□□ 1.46
LRRC42-204ENST00000444987 TRMT2AQ8IZ69 625 aaKnown RBP24.16■■□□□ 1.46
LRRC42-204ENST00000444987 PSMD1Q99460 953 aa24.16■■□□□ 1.46
LRRC42-204ENST00000444987 SNED1Q8TER0 1413 aa24.16■■□□□ 1.46
LRRC42-204ENST00000444987 KDM2BQ8NHM5 1336 aa24.15■■□□□ 1.46
LRRC42-204ENST00000444987 CDHR2Q9BYE9 1310 aa24.15■■□□□ 1.46
LRRC42-204ENST00000444987 IGKV5-2P06315 115 aa24.15■■□□□ 1.46
LRRC42-204ENST00000444987 DNAAF4Q8WXU2 420 aa24.15■■□□□ 1.46
LRRC42-204ENST00000444987 ABCC4O15439 1325 aa24.14■■□□□ 1.46
LRRC42-204ENST00000444987 GRAPQ13588 217 aa24.14■■□□□ 1.45
LRRC42-204ENST00000444987 GRAPLQ8TC17 118 aaPredicted RBP24.14■■□□□ 1.45
LRRC42-204ENST00000444987 ATP6V0A2Q9Y487 856 aa24.14■■□□□ 1.45
LRRC42-204ENST00000444987 NEURL1BA8MQ27 555 aa24.13■■□□□ 1.45
LRRC42-204ENST00000444987 CT47B1P0C2W7 299 aaPredicted RBP24.13■■□□□ 1.45
LRRC42-204ENST00000444987 LINS1Q8NG48 757 aa24.13■■□□□ 1.45
LRRC42-204ENST00000444987 PDE8AO60658 829 aa24.12■■□□□ 1.45
LRRC42-204ENST00000444987 SP8Q8IXZ3 490 aa24.12■■□□□ 1.45
LRRC42-204ENST00000444987 ZNF526Q8TF50 670 aaPredicted RBP24.12■■□□□ 1.45
LRRC42-204ENST00000444987 VPS33BQ9H267 617 aa24.11■■□□□ 1.45
LRRC42-204ENST00000444987 GLTPD2A6NH11 291 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms