RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 RRAGCQ9HB90 399 aa21.9■■□□□ 1.1
LIME1-202ENST00000444951 CACNA1SQ13698 1873 aa21.9■■□□□ 1.1
LIME1-202ENST00000444951 PLIN1O60240 522 aa21.89■■□□□ 1.09
LIME1-202ENST00000444951 ANKRD13DQ6ZTN6 518 aa21.89■■□□□ 1.09
LIME1-202ENST00000444951 ZNF622Q969S3 477 aaKnown RBP eCLIP21.89■■□□□ 1.09
LIME1-202ENST00000444951 BRIP1Q9BX63 1249 aa21.89■■□□□ 1.09
LIME1-202ENST00000444951 ZNF219Q9P2Y4 722 aaPredicted RBP21.89■■□□□ 1.09
LIME1-202ENST00000444951 CACNA1FO60840 1977 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 KDM2BQ8NHM5 1336 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 SLX4Q8IY92 1834 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 PI4KAP2A4QPH2 592 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 F6X3S4 739 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 LMNB1P20700 586 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 PI4KAP1Q8N8J0 262 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 RBM46Q8TBY0 533 aaKnown RBP21.88■■□□□ 1.09
LIME1-202ENST00000444951 SETDB2Q96T68 719 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 FER1L6Q2WGJ9 1857 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 MAP3K15Q6ZN16 1313 aa21.87■■□□□ 1.09
LIME1-202ENST00000444951 IPO8O15397 1037 aaKnown RBP21.87■■□□□ 1.09
LIME1-202ENST00000444951 CNBD1Q8NA66 436 aa21.87■■□□□ 1.09
LIME1-202ENST00000444951 TNNQ9UQP3 1299 aa21.87■■□□□ 1.09
LIME1-202ENST00000444951 MAP3K2Q9Y2U5 619 aa21.87■■□□□ 1.09
LIME1-202ENST00000444951 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
LIME1-202ENST00000444951 WDR90Q96KV7 1748 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 PTPRCP08575 1304 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 C21orf2O43822 256 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 PDE6BP35913 854 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 APLP1P51693 650 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 BRPF1P55201 1214 aaPredicted RBP21.86■■□□□ 1.09
LIME1-202ENST00000444951 HTRA3P83110 453 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 HLFQ16534 295 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 ZKSCAN2Q63HK3 967 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 SLC4A10Q6U841 1118 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 KSR2Q6VAB6 950 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 PLBD2Q8NHP8 589 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 CLUAP1Q96AJ1 413 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 DNAJC5GQ8N7S2 189 aa21.85■■□□□ 1.09
LIME1-202ENST00000444951 C16orf71Q8IYS4 520 aaPredicted RBP21.84■■□□□ 1.09
LIME1-202ENST00000444951 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.84■■□□□ 1.09
LIME1-202ENST00000444951 MYD88Q99836 296 aa21.84■■□□□ 1.09
LIME1-202ENST00000444951 API5Q9BZZ5 524 aaKnown RBP21.84■■□□□ 1.09
LIME1-202ENST00000444951 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
LIME1-202ENST00000444951 ZC3H4Q9UPT8 1303 aaKnown RBP21.83■■□□□ 1.09
LIME1-202ENST00000444951 ERVV-1B6SEH8 477 aa21.83■■□□□ 1.09
LIME1-202ENST00000444951 TRIM27P14373 513 aa21.83■■□□□ 1.09
LIME1-202ENST00000444951 ATF7IPQ6VMQ6 1270 aa21.83■■□□□ 1.09
LIME1-202ENST00000444951 DNAAF4Q8WXU2 420 aa21.83■■□□□ 1.09
LIME1-202ENST00000444951 DICER1Q9UPY3 1922 aaKnown RBP21.82■■□□□ 1.08
LIME1-202ENST00000444951 GLTPD2A6NH11 291 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 SRGNP10124 158 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 GPTP24298 496 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 RRP1P56182 461 aaKnown RBP21.82■■□□□ 1.08
LIME1-202ENST00000444951 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 PDZRN3Q9UPQ7 1066 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 ZNF652Q9Y2D9 606 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
LIME1-202ENST00000444951 NPHP1O15259 732 aa21.81■■□□□ 1.08
LIME1-202ENST00000444951 ST5P78524 1137 aa21.81■■□□□ 1.08
LIME1-202ENST00000444951 CLEC4GQ6UXB4 293 aa21.81■■□□□ 1.08
LIME1-202ENST00000444951 GIGYF2Q6Y7W6 1299 aaKnown RBP21.81■■□□□ 1.08
LIME1-202ENST00000444951 FTSJ3Q8IY81 847 aaKnown RBP21.81■■□□□ 1.08
LIME1-202ENST00000444951 NEXNQ0ZGT2 675 aa21.8■■□□□ 1.08
LIME1-202ENST00000444951 FSTL1Q12841 308 aa21.8■■□□□ 1.08
LIME1-202ENST00000444951 STYK1Q6J9G0 422 aa21.8■■□□□ 1.08
LIME1-202ENST00000444951 PRPF40BQ6NWY9 871 aaKnown RBP21.8■■□□□ 1.08
LIME1-202ENST00000444951 NBPF5PQ86XG9 351 aaPredicted RBP21.8■■□□□ 1.08
LIME1-202ENST00000444951 METTL22Q9BUU2 404 aaPredicted RBP21.8■■□□□ 1.08
LIME1-202ENST00000444951 NUP98P52948 1817 aa21.79■■□□□ 1.08
LIME1-202ENST00000444951 FAM177BA6PVY3 158 aa21.79■■□□□ 1.08
LIME1-202ENST00000444951 POTECB2RU33 542 aa21.79■■□□□ 1.08
LIME1-202ENST00000444951 PANK1Q8TE04 598 aa21.79■■□□□ 1.08
LIME1-202ENST00000444951 TCIRG1Q13488 830 aa21.78■■□□□ 1.08
LIME1-202ENST00000444951 C20orf194Q5TEA3 1177 aa21.78■■□□□ 1.08
LIME1-202ENST00000444951 DZIP1LQ8IYY4 767 aaKnown RBP21.78■■□□□ 1.08
LIME1-202ENST00000444951 MASTLQ96GX5 879 aa21.78■■□□□ 1.08
LIME1-202ENST00000444951 NIP7Q9Y221 180 aaKnown RBP eCLIP21.78■■□□□ 1.08
LIME1-202ENST00000444951 CWF19L2Q2TBE0 894 aaKnown RBP21.77■■□□□ 1.08
LIME1-202ENST00000444951 HSP90AB3PQ58FF7 597 aa21.77■■□□□ 1.08
LIME1-202ENST00000444951 CNKSR1Q969H4 720 aa21.77■■□□□ 1.08
LIME1-202ENST00000444951 RLBP1P12271 317 aa21.76■■□□□ 1.07
LIME1-202ENST00000444951 C7orf43Q8WVR3 580 aa21.76■■□□□ 1.07
LIME1-202ENST00000444951 ABCC4O15439 1325 aa21.76■■□□□ 1.07
LIME1-202ENST00000444951 LTBP3Q9NS15 1303 aa21.76■■□□□ 1.07
LIME1-202ENST00000444951 IGKV5-2P06315 115 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 VEGFAP15692 232 aaPredicted RBP21.75■■□□□ 1.07
LIME1-202ENST00000444951 ERFEQ4G0M1 354 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 BEND3Q5T5X7 828 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 OLFM4Q6UX06 510 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 TMEM57Q8N5G2 664 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 SMC1BQ8NDV3 1235 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 SRCIN1Q9C0H9 1055 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 TAOK3Q9H2K8 898 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 PCNTO95613 3336 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 KLRG2A4D1S0 409 aaPredicted RBP21.74■■□□□ 1.07
LIME1-202ENST00000444951 MS4A1P11836 297 aa21.74■■□□□ 1.07
LIME1-202ENST00000444951 IRX6P78412 446 aaPredicted RBP21.74■■□□□ 1.07
LIME1-202ENST00000444951 ZNF34Q8IZ26 560 aa21.74■■□□□ 1.07
LIME1-202ENST00000444951 LINS1Q8NG48 757 aa21.74■■□□□ 1.07
LIME1-202ENST00000444951 UBN2Q6ZU65 1347 aa21.74■■□□□ 1.07
LIME1-202ENST00000444951 ANKRD36CQ5JPF3 1778 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms