RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 UTP14AQ9BVJ6 771 aaKnown RBP28.84■■■□□ 2.21
LMBR1-211ENST00000444719 PLBD2Q8NHP8 589 aa28.83■■■□□ 2.21
LMBR1-211ENST00000444719 NLRP10Q86W26 655 aa28.82■■■□□ 2.2
LMBR1-211ENST00000444719 PHAXQ9H814 394 aaKnown RBP28.82■■■□□ 2.2
LMBR1-211ENST00000444719 NCBP3Q53F19 620 aaKnown RBP28.81■■■□□ 2.2
LMBR1-211ENST00000444719 ALDH1B1P30837 517 aa28.8■■■□□ 2.2
LMBR1-211ENST00000444719 CRY2Q49AN0 593 aa28.8■■■□□ 2.2
LMBR1-211ENST00000444719 RPGRQ92834 1020 aaKnown RBP28.8■■■□□ 2.2
LMBR1-211ENST00000444719 IL16Q14005 1332 aa28.79■■■□□ 2.2
LMBR1-211ENST00000444719 CCDC30Q5VVM6 783 aa28.79■■■□□ 2.2
LMBR1-211ENST00000444719 OLFM4Q6UX06 510 aa28.79■■■□□ 2.2
LMBR1-211ENST00000444719 C3orf67Q6ZVT6 689 aa28.79■■■□□ 2.2
LMBR1-211ENST00000444719 SYNE4Q8N205 404 aa28.79■■■□□ 2.2
LMBR1-211ENST00000444719 C7orf43Q8WVR3 580 aa28.79■■■□□ 2.2
LMBR1-211ENST00000444719 ATP5J2-PTCD1G3V325 749 aa28.78■■■□□ 2.2
LMBR1-211ENST00000444719 TCERG1O14776 1098 aaKnown RBP28.78■■■□□ 2.2
LMBR1-211ENST00000444719 TRMT112Q9UI30 125 aaKnown RBP28.78■■■□□ 2.2
LMBR1-211ENST00000444719 DICER1Q9UPY3 1922 aaKnown RBP28.78■■■□□ 2.2
LMBR1-211ENST00000444719 TIAM2Q8IVF5 1701 aa28.77■■■□□ 2.2
LMBR1-211ENST00000444719 SOGA3Q5TF21 947 aa28.77■■■□□ 2.2
LMBR1-211ENST00000444719 RIC3Q7Z5B4 369 aa28.77■■■□□ 2.2
LMBR1-211ENST00000444719 NLRP3Q96P20 1036 aa28.77■■■□□ 2.2
LMBR1-211ENST00000444719 TAOK3Q9H2K8 898 aa28.77■■■□□ 2.2
LMBR1-211ENST00000444719 NMRK2Q9NPI5 230 aa28.77■■■□□ 2.2
LMBR1-211ENST00000444719 RIC1Q4ADV7 1423 aa28.77■■■□□ 2.2
LMBR1-211ENST00000444719 LAMB2P55268 1798 aa28.76■■■□□ 2.19
LMBR1-211ENST00000444719 KIF3CO14782 793 aa28.76■■■□□ 2.19
LMBR1-211ENST00000444719 HCLS1P14317 486 aaPredicted RBP28.76■■■□□ 2.19
LMBR1-211ENST00000444719 WDR63Q8IWG1 891 aa28.76■■■□□ 2.19
LMBR1-211ENST00000444719 GOLGA2Q08379 1002 aa28.75■■■□□ 2.19
LMBR1-211ENST00000444719 TWISTNBQ3B726 338 aaPredicted RBP28.75■■■□□ 2.19
LMBR1-211ENST00000444719 CCDC93Q567U6 631 aa28.75■■■□□ 2.19
LMBR1-211ENST00000444719 SLC10A5Q5PT55 438 aa28.75■■■□□ 2.19
LMBR1-211ENST00000444719 RBM17Q96I25 401 aaKnown RBP28.74■■■□□ 2.19
LMBR1-211ENST00000444719 ISCA1Q9BUE6 129 aa28.74■■■□□ 2.19
LMBR1-211ENST00000444719 CHMP4AQ9BY43 222 aa28.74■■■□□ 2.19
LMBR1-211ENST00000444719 FANCIQ9NVI1 1328 aa28.73■■■□□ 2.19
LMBR1-211ENST00000444719 HOXA10P31260 410 aaPredicted RBP28.73■■■□□ 2.19
LMBR1-211ENST00000444719 KDM2BQ8NHM5 1336 aa28.72■■■□□ 2.19
LMBR1-211ENST00000444719 SH3TC1Q8TE82 1336 aa28.72■■■□□ 2.19
LMBR1-211ENST00000444719 LTBP3Q9NS15 1303 aa28.72■■■□□ 2.19
LMBR1-211ENST00000444719 RNF123Q5XPI4 1314 aa28.71■■■□□ 2.19
LMBR1-211ENST00000444719 RTL5Q5HYW3 569 aaPredicted RBP28.71■■■□□ 2.19
LMBR1-211ENST00000444719 STK31Q9BXU1 1019 aa28.71■■■□□ 2.19
LMBR1-211ENST00000444719 SPINK5Q9NQ38 1064 aaPredicted RBP28.71■■■□□ 2.19
LMBR1-211ENST00000444719 FAM89AQ96GI7 184 aa28.7■■■□□ 2.18
LMBR1-211ENST00000444719 CRAMP1Q96RY5 1269 aa28.7■■■□□ 2.18
LMBR1-211ENST00000444719 RRAGCQ9HB90 399 aa28.7■■■□□ 2.18
LMBR1-211ENST00000444719 TAF1P21675 1872 aa28.7■■■□□ 2.18
LMBR1-211ENST00000444719 ZC3H4Q9UPT8 1303 aaKnown RBP28.69■■■□□ 2.18
LMBR1-211ENST00000444719 SLC51AQ86UW1 340 aa28.69■■■□□ 2.18
LMBR1-211ENST00000444719 RTKN2Q8IZC4 609 aa28.69■■■□□ 2.18
LMBR1-211ENST00000444719 MYD88Q99836 296 aa28.69■■■□□ 2.18
LMBR1-211ENST00000444719 ZNF277Q9NRM2 450 aaPredicted RBP28.69■■■□□ 2.18
LMBR1-211ENST00000444719 DDX60Q8IY21 1712 aaKnown RBP28.69■■■□□ 2.18
LMBR1-211ENST00000444719 FKBP4Q02790 459 aaKnown RBP eCLIP28.68■■■□□ 2.18
LMBR1-211ENST00000444719 GLTPD2A6NH11 291 aa28.67■■■□□ 2.18
LMBR1-211ENST00000444719 DDX58O95786 925 aaKnown RBP28.67■■■□□ 2.18
LMBR1-211ENST00000444719 EXOSC9Q06265 439 aaKnown RBP28.67■■■□□ 2.18
LMBR1-211ENST00000444719 PPEF1O14829 653 aaPredicted RBP28.66■■■□□ 2.18
LMBR1-211ENST00000444719 SLC4A2P04920 1241 aa28.66■■■□□ 2.18
LMBR1-211ENST00000444719 TRIM28Q13263 835 aaKnown RBP28.66■■■□□ 2.18
LMBR1-211ENST00000444719 G2E3Q7L622 706 aa28.66■■■□□ 2.18
LMBR1-211ENST00000444719 MAP3K2Q9Y2U5 619 aa28.65■■■□□ 2.18
LMBR1-211ENST00000444719 ABCC4O15439 1325 aa28.65■■■□□ 2.18
LMBR1-211ENST00000444719 METTL22Q9BUU2 404 aaPredicted RBP28.64■■■□□ 2.18
LMBR1-211ENST00000444719 CACNA1FO60840 1977 aa28.63■■■□□ 2.17
LMBR1-211ENST00000444719 PI4KAP2A4QPH2 592 aa28.63■■■□□ 2.17
LMBR1-211ENST00000444719 VAMP4O75379 141 aa28.63■■■□□ 2.17
LMBR1-211ENST00000444719 DPY19L2Q6NUT2 758 aa28.63■■■□□ 2.17
LMBR1-211ENST00000444719 PI4KAP1Q8N8J0 262 aa28.63■■■□□ 2.17
LMBR1-211ENST00000444719 CC2D2BQ6DHV5 1058 aa28.62■■■□□ 2.17
LMBR1-211ENST00000444719 KSR2Q6VAB6 950 aa28.62■■■□□ 2.17
LMBR1-211ENST00000444719 DDX46Q7L014 1031 aaKnown RBP28.62■■■□□ 2.17
LMBR1-211ENST00000444719 C16orf71Q8IYS4 520 aaPredicted RBP28.62■■■□□ 2.17
LMBR1-211ENST00000444719 JARID2Q92833 1246 aaPredicted RBP28.62■■■□□ 2.17
LMBR1-211ENST00000444719 MYH16Q9H6N6 1097 aa28.62■■■□□ 2.17
LMBR1-211ENST00000444719 TOMM70O94826 608 aa28.61■■■□□ 2.17
LMBR1-211ENST00000444719 IRS4O14654 1257 aaPredicted RBP28.6■■■□□ 2.17
LMBR1-211ENST00000444719 ZBTB38Q8NAP3 1195 aaPredicted RBP28.6■■■□□ 2.17
LMBR1-211ENST00000444719 SNED1Q8TER0 1413 aa28.6■■■□□ 2.17
LMBR1-211ENST00000444719 IARSP41252 1262 aaKnown RBP28.59■■■□□ 2.17
LMBR1-211ENST00000444719 CCDC191Q8NCU4 936 aa28.59■■■□□ 2.17
LMBR1-211ENST00000444719 TMX4Q9H1E5 349 aaPredicted RBP28.59■■■□□ 2.17
LMBR1-211ENST00000444719 CWC25Q9NXE8 425 aaPredicted RBP28.59■■■□□ 2.17
LMBR1-211ENST00000444719 ATP6V0A2Q9Y487 856 aa28.59■■■□□ 2.17
LMBR1-211ENST00000444719 BBOX1O75936 387 aa28.58■■■□□ 2.17
LMBR1-211ENST00000444719 DDNO94850 711 aaPredicted RBP28.58■■■□□ 2.17
LMBR1-211ENST00000444719 PSMD1Q99460 953 aa28.58■■■□□ 2.17
LMBR1-211ENST00000444719 VEGFAP15692 232 aaPredicted RBP28.57■■■□□ 2.16
LMBR1-211ENST00000444719 GRAPQ13588 217 aa28.57■■■□□ 2.16
LMBR1-211ENST00000444719 GRAPLQ8TC17 118 aaPredicted RBP28.57■■■□□ 2.16
LMBR1-211ENST00000444719 ZNF521Q96K83 1311 aa28.57■■■□□ 2.16
LMBR1-211ENST00000444719 IGKV5-2P06315 115 aa28.56■■■□□ 2.16
LMBR1-211ENST00000444719 FLIIQ13045 1269 aa28.56■■■□□ 2.16
LMBR1-211ENST00000444719 CCER2I3L3R5 266 aa28.55■■■□□ 2.16
LMBR1-211ENST00000444719 PCCAP05165 728 aaPredicted RBP28.55■■■□□ 2.16
LMBR1-211ENST00000444719 NEXNQ0ZGT2 675 aa28.55■■■□□ 2.16
LMBR1-211ENST00000444719 SF3B3Q15393 1217 aaKnown RBP28.55■■■□□ 2.16
LMBR1-211ENST00000444719 GRIPAP1Q4V328 841 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms