RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
SSBP3-208ENST00000444533 NUTM1Q86Y26 1132 aa17.88■□□□□ 0.45
SSBP3-208ENST00000444533 C2CD5Q86YS7 1000 aa17.88■□□□□ 0.45
SSBP3-208ENST00000444533 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
SSBP3-208ENST00000444533 LINS1Q8NG48 757 aa17.88■□□□□ 0.45
SSBP3-208ENST00000444533 API5Q9BZZ5 524 aaKnown RBP17.88■□□□□ 0.45
SSBP3-208ENST00000444533 ANKRD36CQ5JPF3 1778 aa17.88■□□□□ 0.45
SSBP3-208ENST00000444533 NRXN2Q9P2S2 1712 aa17.87■□□□□ 0.45
SSBP3-208ENST00000444533 AFDNP55196 1824 aaKnown RBP17.87■□□□□ 0.45
SSBP3-208ENST00000444533 NTSR2O95665 410 aa17.87■□□□□ 0.45
SSBP3-208ENST00000444533 BRPF1P55201 1214 aaPredicted RBP17.87■□□□□ 0.45
SSBP3-208ENST00000444533 ERFEQ4G0M1 354 aa17.87■□□□□ 0.45
SSBP3-208ENST00000444533 CCDC24Q8N4L8 307 aa17.87■□□□□ 0.45
SSBP3-208ENST00000444533 NLGN2Q8NFZ4 835 aa17.87■□□□□ 0.45
SSBP3-208ENST00000444533 NLRP3Q96P20 1036 aa17.87■□□□□ 0.45
SSBP3-208ENST00000444533 PIM2Q9P1W9 311 aa17.87■□□□□ 0.45
SSBP3-208ENST00000444533 A0A0G2JLW4 131 aa17.86■□□□□ 0.45
SSBP3-208ENST00000444533 F6X3S4 739 aa17.86■□□□□ 0.45
SSBP3-208ENST00000444533 GPR162Q16538 588 aa17.86■□□□□ 0.45
SSBP3-208ENST00000444533 ZBTB38Q8NAP3 1195 aaPredicted RBP17.86■□□□□ 0.45
SSBP3-208ENST00000444533 FRAT1Q92837 279 aaPredicted RBP17.86■□□□□ 0.45
SSBP3-208ENST00000444533 NOB1Q9ULX3 412 aaKnown RBP17.86■□□□□ 0.45
SSBP3-208ENST00000444533 DPEP1P16444 411 aa17.85■□□□□ 0.45
SSBP3-208ENST00000444533 ARHGAP45Q92619 1136 aa17.85■□□□□ 0.45
SSBP3-208ENST00000444533 RPGRQ92834 1020 aaKnown RBP17.85■□□□□ 0.45
SSBP3-208ENST00000444533 ZNF622Q969S3 477 aaKnown RBP eCLIP17.85■□□□□ 0.45
SSBP3-208ENST00000444533 SRCIN1Q9C0H9 1055 aa17.85■□□□□ 0.45
SSBP3-208ENST00000444533 NEURL1BA8MQ27 555 aa17.84■□□□□ 0.45
SSBP3-208ENST00000444533 PCCAP05165 728 aaPredicted RBP17.84■□□□□ 0.45
SSBP3-208ENST00000444533 FAM89AQ96GI7 184 aa17.84■□□□□ 0.45
SSBP3-208ENST00000444533 MASTLQ96GX5 879 aa17.84■□□□□ 0.45
SSBP3-208ENST00000444533 KIF13BQ9NQT8 1826 aa17.84■□□□□ 0.45
SSBP3-208ENST00000444533 PXDNLA1KZ92 1463 aa17.83■□□□□ 0.45
SSBP3-208ENST00000444533 ALDH1L1O75891 902 aa17.83■□□□□ 0.44
SSBP3-208ENST00000444533 NPR1P16066 1061 aa17.83■□□□□ 0.44
SSBP3-208ENST00000444533 CHRNA5P30532 468 aa17.83■□□□□ 0.44
SSBP3-208ENST00000444533 CWF19L2Q2TBE0 894 aaKnown RBP17.83■□□□□ 0.44
SSBP3-208ENST00000444533 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.44
SSBP3-208ENST00000444533 RTL5Q5HYW3 569 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-208ENST00000444533 CNKSR1Q969H4 720 aa17.83■□□□□ 0.44
SSBP3-208ENST00000444533 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-208ENST00000444533 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
SSBP3-208ENST00000444533 IGKV5-2P06315 115 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 ALDH1B1P30837 517 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 CCT4P50991 539 aaKnown RBP17.82■□□□□ 0.44
SSBP3-208ENST00000444533 GCKRQ14397 625 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 SLC10A5Q5PT55 438 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 BEND3Q5T5X7 828 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 STYK1Q6J9G0 422 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 TTLL6Q8N841 843 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 RBM17Q96I25 401 aaKnown RBP17.82■□□□□ 0.44
SSBP3-208ENST00000444533 TMX4Q9H1E5 349 aaPredicted RBP17.82■□□□□ 0.44
SSBP3-208ENST00000444533 RCAN3Q9UKA8 241 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 BCS1LQ9Y276 419 aa17.82■□□□□ 0.44
SSBP3-208ENST00000444533 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
SSBP3-208ENST00000444533 GRIN3BO60391 1043 aa17.81■□□□□ 0.44
SSBP3-208ENST00000444533 BCAR3O75815 825 aa17.81■□□□□ 0.44
SSBP3-208ENST00000444533 SRGNP10124 158 aa17.81■□□□□ 0.44
SSBP3-208ENST00000444533 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-208ENST00000444533 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
SSBP3-208ENST00000444533 FTSJ3Q8IY81 847 aaKnown RBP17.81■□□□□ 0.44
SSBP3-208ENST00000444533 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-208ENST00000444533 ABCC12Q96J65 1359 aa17.8■□□□□ 0.44
SSBP3-208ENST00000444533 MS4A1P11836 297 aa17.8■□□□□ 0.44
SSBP3-208ENST00000444533 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
SSBP3-208ENST00000444533 UBE3BQ7Z3V4 1068 aa17.8■□□□□ 0.44
SSBP3-208ENST00000444533 WWC3Q9ULE0 1092 aa17.8■□□□□ 0.44
SSBP3-208ENST00000444533 HDAC5Q9UQL6 1122 aa17.8■□□□□ 0.44
SSBP3-208ENST00000444533 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
SSBP3-208ENST00000444533 PDE8AO60658 829 aa17.79■□□□□ 0.44
SSBP3-208ENST00000444533 DDX46Q7L014 1031 aaKnown RBP17.79■□□□□ 0.44
SSBP3-208ENST00000444533 CDHR2Q9BYE9 1310 aa17.78■□□□□ 0.44
SSBP3-208ENST00000444533 GRM8O00222 908 aa17.78■□□□□ 0.44
SSBP3-208ENST00000444533 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
SSBP3-208ENST00000444533 N4BP2Q86UW6 1770 aaPredicted RBP17.78■□□□□ 0.44
SSBP3-208ENST00000444533 H7C1W4 665 aa17.77■□□□□ 0.44
SSBP3-208ENST00000444533 KCNA3P22001 575 aa17.77■□□□□ 0.44
SSBP3-208ENST00000444533 CRY2Q49AN0 593 aa17.77■□□□□ 0.44
SSBP3-208ENST00000444533 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
SSBP3-208ENST00000444533 SYNE4Q8N205 404 aa17.77■□□□□ 0.44
SSBP3-208ENST00000444533 ANKRD31Q8N7Z5 1873 aa17.75■□□□□ 0.43
SSBP3-208ENST00000444533 TRIM27P14373 513 aa17.75■□□□□ 0.43
SSBP3-208ENST00000444533 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
SSBP3-208ENST00000444533 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
SSBP3-208ENST00000444533 CRAMP1Q96RY5 1269 aa17.75■□□□□ 0.43
SSBP3-208ENST00000444533 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
SSBP3-208ENST00000444533 CTSWP56202 376 aa17.74■□□□□ 0.43
SSBP3-208ENST00000444533 SF3B3Q15393 1217 aaKnown RBP17.74■□□□□ 0.43
SSBP3-208ENST00000444533 DZIP1LQ8IYY4 767 aaKnown RBP17.74■□□□□ 0.43
SSBP3-208ENST00000444533 CLUAP1Q96AJ1 413 aa17.74■□□□□ 0.43
SSBP3-208ENST00000444533 BBOX1O75936 387 aa17.73■□□□□ 0.43
SSBP3-208ENST00000444533 TMC4Q7Z404 712 aa17.73■□□□□ 0.43
SSBP3-208ENST00000444533 ABCC4O15439 1325 aa17.72■□□□□ 0.43
SSBP3-208ENST00000444533 DLEC1Q9Y238 1755 aa17.72■□□□□ 0.43
SSBP3-208ENST00000444533 UBTFL1P0CB47 393 aaPredicted RBP17.72■□□□□ 0.43
SSBP3-208ENST00000444533 YBX3P16989 372 aaKnown RBP eCLIP17.72■□□□□ 0.43
SSBP3-208ENST00000444533 GRIPAP1Q4V328 841 aa17.72■□□□□ 0.43
SSBP3-208ENST00000444533 INTS3Q68E01 1043 aaKnown RBP17.72■□□□□ 0.43
SSBP3-208ENST00000444533 ARHGAP27Q6ZUM4 889 aa17.72■□□□□ 0.43
SSBP3-208ENST00000444533 CDC5LQ99459 802 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms