RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 FLT3P36888 993 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 TKFCQ3LXA3 575 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 DALRD3Q5D0E6 543 aaKnown RBP4.88□□□□□ -1.63
UBR3-206ENST00000444475 ANKRD13BQ86YJ7 626 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 MPNDQ8N594 471 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 ZNF408Q9H9D4 720 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 SLC26A4O43511 780 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 CD46P15529 392 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 RASA1P20936 1047 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 ERFEQ4G0M1 354 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 CCDC92Q53HC0 331 aaPredicted RBP4.88□□□□□ -1.63
UBR3-206ENST00000444475 SLC10A5Q5PT55 438 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 DUSP27Q5VZP5 1158 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 ILDR1Q86SU0 546 aaPredicted RBP4.88□□□□□ -1.63
UBR3-206ENST00000444475 RELL1Q8IUW5 271 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 CKAP2LQ8IYA6 745 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 GTF3C2Q8WUA4 911 aaPredicted RBP4.88□□□□□ -1.63
UBR3-206ENST00000444475 APPBP2Q92624 585 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 KAT6BQ8WYB5 2073 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 A0A1W2PRQ8 180 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 SHTN1A0MZ66 631 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 IQCEQ6IPM2 695 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 CXorf56Q9H5V9 222 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 PPCSQ9HAB8 311 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 WASHC2CQ9Y4E1 1318 aa4.88□□□□□ -1.63
UBR3-206ENST00000444475 USP31Q70CQ4 1352 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 DYTNA2CJ06 578 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 CHL1O00533 1208 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 LDHBP07195 334 aaKnown RBP4.87□□□□□ -1.63
UBR3-206ENST00000444475 HOXC13P31276 330 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 ST13P50502 369 aaKnown RBP4.87□□□□□ -1.63
UBR3-206ENST00000444475 ZBED6P86452 979 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 FKBP4Q02790 459 aaKnown RBP eCLIP4.87□□□□□ -1.63
UBR3-206ENST00000444475 CNGB1Q14028 1251 aaPredicted RBP4.87□□□□□ -1.63
UBR3-206ENST00000444475 ALFQ53S48 1182 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 SRPK1Q96SB4 655 aaKnown RBP4.87□□□□□ -1.63
UBR3-206ENST00000444475 PMLP29590 882 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 DSG3P32926 999 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 SQSTM1Q13501 440 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 BRD3Q15059 726 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 TMEM87BQ96K49 555 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 SETDB2Q96T68 719 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 SMAPO00193 183 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 CLDN10P78369 228 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 CCDC70Q6NSX1 233 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 POTEHQ6S545 545 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 JMYQ8N9B5 988 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 ZNF830Q96NB3 372 aaPredicted RBP4.87□□□□□ -1.63
UBR3-206ENST00000444475 FEZ1Q99689 392 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 SLKQ9H2G2 1235 aaPredicted RBP4.87□□□□□ -1.63
UBR3-206ENST00000444475 MRS2Q9HD23 443 aa4.87□□□□□ -1.63
UBR3-206ENST00000444475 PSMC1P62191 440 aaKnown RBP4.86□□□□□ -1.63
UBR3-206ENST00000444475 RAB33AQ14088 237 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 DACT2Q5SW24 774 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 KIAA1614Q5VZ46 1190 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 NXNQ6DKJ4 435 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 SKAP1Q86WV1 359 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 TRPM4Q8TD43 1214 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 DEPDC7Q96QD5 511 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 ADGRG1Q9Y653 693 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 TCERG1O14776 1098 aaKnown RBP4.86□□□□□ -1.63
UBR3-206ENST00000444475 PIP5K1CO60331 668 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 SARSP49591 514 aaKnown RBP4.86□□□□□ -1.63
UBR3-206ENST00000444475 EIF5P55010 431 aaKnown RBP4.86□□□□□ -1.63
UBR3-206ENST00000444475 MTMR3Q13615 1198 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 TAF11Q15544 211 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 MYO1HQ8N1T3 1032 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 VPS37AQ8NEZ2 397 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 LRRN4Q8WUT4 740 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 CDHR1Q96JP9 859 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 KMT5AQ9NQR1 393 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 IPPQ9Y573 584 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 ORC4O43929 436 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 TYRP1P17643 537 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 WASHC5Q12768 1159 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 NFX1Q12986 1120 aaKnown RBP4.86□□□□□ -1.63
UBR3-206ENST00000444475 PSMD2Q13200 908 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 RGL3Q3MIN7 710 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 ARMC3Q5W041 872 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 RPAINQ86UA6 219 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 THNSL2Q86YJ6 484 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 LMNTD2Q8IXW0 634 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 TBC1D20Q96BZ9 403 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 SLX1AQ9BQ83 275 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 CFHR5Q9BXR6 569 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 VTI1BQ9UEU0 232 aa4.86□□□□□ -1.63
UBR3-206ENST00000444475 GEMIN4P57678 1058 aaKnown RBP4.85□□□□□ -1.63
UBR3-206ENST00000444475 DPYDQ12882 1025 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 PLBD1Q6P4A8 553 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 LVRNQ6Q4G3 990 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 PAF1Q8N7H5 531 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 ALKBH8Q96BT7 664 aaKnown RBP4.85□□□□□ -1.63
UBR3-206ENST00000444475 ABCB7O75027 752 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 OATP04181 439 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 PSMA3P25788 255 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 PGBD4Q96DM1 585 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 KIF12Q96FN5 646 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 ZSWIM6Q9HCJ5 1215 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 RIC8AQ9NPQ8 531 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 CYLDQ9NQC7 956 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms