RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 NTSR2O95665 410 aa17.67■□□□□ 0.42
GARNL3-206ENST00000439286 TAF1DQ9H5J8 278 aaPredicted RBP17.67■□□□□ 0.42
GARNL3-206ENST00000439286 BCORQ6W2J9 1755 aa17.66■□□□□ 0.42
GARNL3-206ENST00000439286 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
GARNL3-206ENST00000439286 PPEF1O14829 653 aaPredicted RBP17.66■□□□□ 0.42
GARNL3-206ENST00000439286 PDIA6Q15084 440 aa17.66■□□□□ 0.42
GARNL3-206ENST00000439286 COPS6Q7L5N1 327 aa17.66■□□□□ 0.42
GARNL3-206ENST00000439286 SBF1O95248 1867 aa17.65■□□□□ 0.42
GARNL3-206ENST00000439286 COL11A2P13942 1736 aaPredicted RBP17.65■□□□□ 0.42
GARNL3-206ENST00000439286 FZD9O00144 591 aa17.65■□□□□ 0.42
GARNL3-206ENST00000439286 ANXA1P04083 346 aa17.65■□□□□ 0.42
GARNL3-206ENST00000439286 PNMA8AQ86V59 439 aaPredicted RBP17.65■□□□□ 0.42
GARNL3-206ENST00000439286 GPC2Q8N158 579 aa17.65■□□□□ 0.42
GARNL3-206ENST00000439286 LARGE2Q8N3Y3 721 aa17.65■□□□□ 0.42
GARNL3-206ENST00000439286 XAGE3Q8WTP9 111 aa17.65■□□□□ 0.42
GARNL3-206ENST00000439286 CREBZFQ9NS37 354 aa17.65■□□□□ 0.42
GARNL3-206ENST00000439286 ZNF541Q9H0D2 1346 aa17.65■□□□□ 0.42
GARNL3-206ENST00000439286 CHL1O00533 1208 aa17.64■□□□□ 0.41
GARNL3-206ENST00000439286 LMOD1P29536 600 aaPredicted RBP17.64■□□□□ 0.41
GARNL3-206ENST00000439286 EPHX2P34913 555 aa17.64■□□□□ 0.41
GARNL3-206ENST00000439286 PROSER3Q2NL68 480 aa17.64■□□□□ 0.41
GARNL3-206ENST00000439286 SLC10A5Q5PT55 438 aa17.64■□□□□ 0.41
GARNL3-206ENST00000439286 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
GARNL3-206ENST00000439286 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
GARNL3-206ENST00000439286 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
GARNL3-206ENST00000439286 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
GARNL3-206ENST00000439286 POTEJP0CG39 1038 aa17.63■□□□□ 0.41
GARNL3-206ENST00000439286 LRP10Q7Z4F1 713 aa17.63■□□□□ 0.41
GARNL3-206ENST00000439286 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
GARNL3-206ENST00000439286 ADAMTS8Q9UP79 889 aa17.63■□□□□ 0.41
GARNL3-206ENST00000439286 WDR90Q96KV7 1748 aa17.63■□□□□ 0.41
GARNL3-206ENST00000439286 SLX4Q8IY92 1834 aa17.63■□□□□ 0.41
GARNL3-206ENST00000439286 RIC1Q4ADV7 1423 aa17.63■□□□□ 0.41
GARNL3-206ENST00000439286 TCIRG1Q13488 830 aa17.62■□□□□ 0.41
GARNL3-206ENST00000439286 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
GARNL3-206ENST00000439286 NIM1KQ8IY84 436 aa17.62■□□□□ 0.41
GARNL3-206ENST00000439286 SUPT20HQ8NEM7 779 aa17.62■□□□□ 0.41
GARNL3-206ENST00000439286 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
GARNL3-206ENST00000439286 BBOX1O75936 387 aa17.61■□□□□ 0.41
GARNL3-206ENST00000439286 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
GARNL3-206ENST00000439286 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
GARNL3-206ENST00000439286 VPS33BQ9H267 617 aa17.61■□□□□ 0.41
GARNL3-206ENST00000439286 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
GARNL3-206ENST00000439286 TRIM35Q9UPQ4 493 aa17.61■□□□□ 0.41
GARNL3-206ENST00000439286 HOXB7P09629 217 aa17.6■□□□□ 0.41
GARNL3-206ENST00000439286 C3orf67Q6ZVT6 689 aa17.6■□□□□ 0.41
GARNL3-206ENST00000439286 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
GARNL3-206ENST00000439286 DBF4Q9UBU7 674 aaPredicted RBP17.6■□□□□ 0.41
GARNL3-206ENST00000439286 ATP6V0A2Q9Y487 856 aa17.6■□□□□ 0.41
GARNL3-206ENST00000439286 FER1L6Q2WGJ9 1857 aa17.59■□□□□ 0.41
GARNL3-206ENST00000439286 KDM3BQ7LBC6 1761 aa17.59■□□□□ 0.41
GARNL3-206ENST00000439286 SH3TC1Q8TE82 1336 aa17.59■□□□□ 0.41
GARNL3-206ENST00000439286 TMEM88BA6NKF7 163 aa17.59■□□□□ 0.41
GARNL3-206ENST00000439286 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
GARNL3-206ENST00000439286 HSPA1AP0DMV8 641 aaKnown RBP17.59■□□□□ 0.41
GARNL3-206ENST00000439286 HSPA1BP0DMV9 641 aaKnown RBP17.59■□□□□ 0.41
GARNL3-206ENST00000439286 HCLS1P14317 486 aaPredicted RBP17.59■□□□□ 0.41
GARNL3-206ENST00000439286 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
GARNL3-206ENST00000439286 KRT24Q2M2I5 525 aa17.59■□□□□ 0.41
GARNL3-206ENST00000439286 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
GARNL3-206ENST00000439286 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
GARNL3-206ENST00000439286 LAMB4A4D0S4 1761 aa17.58■□□□□ 0.41
GARNL3-206ENST00000439286 DPP8Q6V1X1 898 aaPredicted RBP17.58■□□□□ 0.4
GARNL3-206ENST00000439286 CNTROBQ8N137 903 aa17.58■□□□□ 0.4
GARNL3-206ENST00000439286 MPNDQ8N594 471 aa17.58■□□□□ 0.4
GARNL3-206ENST00000439286 PLBD2Q8NHP8 589 aa17.58■□□□□ 0.4
GARNL3-206ENST00000439286 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.4
GARNL3-206ENST00000439286 HYPKQ9NX55 129 aa17.58■□□□□ 0.4
GARNL3-206ENST00000439286 ABCC4O15439 1325 aa17.57■□□□□ 0.4
GARNL3-206ENST00000439286 COL13A1Q5TAT6 717 aaPredicted RBP17.57■□□□□ 0.4
GARNL3-206ENST00000439286 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
GARNL3-206ENST00000439286 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
GARNL3-206ENST00000439286 ITGBL1O95965 494 aaPredicted RBP17.56■□□□□ 0.4
GARNL3-206ENST00000439286 AOC3Q16853 763 aa17.56■□□□□ 0.4
GARNL3-206ENST00000439286 DUSP27Q5VZP5 1158 aa17.56■□□□□ 0.4
GARNL3-206ENST00000439286 CHMP4AQ9BY43 222 aa17.56■□□□□ 0.4
GARNL3-206ENST00000439286 GRAPQ13588 217 aa17.55■□□□□ 0.4
GARNL3-206ENST00000439286 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-206ENST00000439286 TMC4Q7Z404 712 aa17.55■□□□□ 0.4
GARNL3-206ENST00000439286 TNS4Q8IZW8 715 aa17.55■□□□□ 0.4
GARNL3-206ENST00000439286 GRAPLQ8TC17 118 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-206ENST00000439286 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
GARNL3-206ENST00000439286 GNAI1P63096 354 aa17.54■□□□□ 0.4
GARNL3-206ENST00000439286 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
GARNL3-206ENST00000439286 USP50Q70EL3 339 aaPredicted RBP17.54■□□□□ 0.4
GARNL3-206ENST00000439286 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
GARNL3-206ENST00000439286 ATP5J2-PTCD1G3V325 749 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 APAF1O14727 1248 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 HSP90B1P14625 803 aaKnown RBP17.53■□□□□ 0.4
GARNL3-206ENST00000439286 EPS15P42566 896 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 AIDAQ96BJ3 306 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 RTFDC1Q9BY42 306 aaPredicted RBP17.53■□□□□ 0.4
GARNL3-206ENST00000439286 IFT57Q9NWB7 429 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 SNED1Q8TER0 1413 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
GARNL3-206ENST00000439286 TNIP1Q15025 636 aa17.52■□□□□ 0.4
GARNL3-206ENST00000439286 DEFB115Q30KQ5 88 aa17.52■□□□□ 0.4
GARNL3-206ENST00000439286 ZNF428Q96B54 188 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms