RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
CSTF3-203ENST00000438862 C7orf43Q8WVR3 580 aa15.28■□□□□ 0.04
CSTF3-203ENST00000438862 SETDB2Q96T68 719 aa15.28■□□□□ 0.04
CSTF3-203ENST00000438862 TNRC18O15417 2968 aaPredicted RBP15.27■□□□□ 0.04
CSTF3-203ENST00000438862 CACNA1SQ13698 1873 aa15.27■□□□□ 0.04
CSTF3-203ENST00000438862 ZNF541Q9H0D2 1346 aa15.27■□□□□ 0.04
CSTF3-203ENST00000438862 SEC24BO95487 1268 aa15.27■□□□□ 0.04
CSTF3-203ENST00000438862 IER5LQ5T953 404 aa15.27■□□□□ 0.04
CSTF3-203ENST00000438862 GPC2Q8N158 579 aa15.27■□□□□ 0.04
CSTF3-203ENST00000438862 CNBD1Q8NA66 436 aa15.27■□□□□ 0.04
CSTF3-203ENST00000438862 LGR6Q9HBX8 967 aa15.27■□□□□ 0.04
CSTF3-203ENST00000438862 RNF123Q5XPI4 1314 aa15.26■□□□□ 0.03
CSTF3-203ENST00000438862 FZD9O00144 591 aa15.26■□□□□ 0.03
CSTF3-203ENST00000438862 SULT6B1Q6IMI4 303 aa15.26■□□□□ 0.03
CSTF3-203ENST00000438862 CYP4F22Q6NT55 531 aa15.26■□□□□ 0.03
CSTF3-203ENST00000438862 RTKN2Q8IZC4 609 aa15.26■□□□□ 0.03
CSTF3-203ENST00000438862 FAM163AQ96GL9 167 aaPredicted RBP15.26■□□□□ 0.03
CSTF3-203ENST00000438862 PDE4DIPQ5VU43 2346 aa15.26■□□□□ 0.03
CSTF3-203ENST00000438862 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
CSTF3-203ENST00000438862 TEX13AQ9BXU3 409 aaPredicted RBP15.25■□□□□ 0.03
CSTF3-203ENST00000438862 ZNF277Q9NRM2 450 aaPredicted RBP15.25■□□□□ 0.03
CSTF3-203ENST00000438862 GRM1Q13255 1194 aa15.24■□□□□ 0.03
CSTF3-203ENST00000438862 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
CSTF3-203ENST00000438862 TSKSQ9UJT2 592 aa15.24■□□□□ 0.03
CSTF3-203ENST00000438862 TBC1D2BQ9UPU7 963 aa15.24■□□□□ 0.03
CSTF3-203ENST00000438862 TLL2Q9Y6L7 1015 aa15.24■□□□□ 0.03
CSTF3-203ENST00000438862 MRC1P22897 1456 aa15.23■□□□□ 0.03
CSTF3-203ENST00000438862 NPR1P16066 1061 aa15.23■□□□□ 0.03
CSTF3-203ENST00000438862 IL6STP40189 918 aaPredicted RBP15.23■□□□□ 0.03
CSTF3-203ENST00000438862 IARSP41252 1262 aaKnown RBP15.23■□□□□ 0.03
CSTF3-203ENST00000438862 DGKZQ13574 1117 aa15.23■□□□□ 0.03
CSTF3-203ENST00000438862 TMEM106CQ9BVX2 250 aa15.23■□□□□ 0.03
CSTF3-203ENST00000438862 CASP8AP2Q9UKL3 1982 aa15.23■□□□□ 0.03
CSTF3-203ENST00000438862 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
CSTF3-203ENST00000438862 LMOD1P29536 600 aaPredicted RBP15.22■□□□□ 0.03
CSTF3-203ENST00000438862 CST9Q5W186 159 aa15.22■□□□□ 0.03
CSTF3-203ENST00000438862 TTC5Q8N0Z6 440 aa15.22■□□□□ 0.03
CSTF3-203ENST00000438862 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
CSTF3-203ENST00000438862 SCN7AQ01118 1682 aa15.22■□□□□ 0.03
CSTF3-203ENST00000438862 AOC2O75106 756 aa15.21■□□□□ 0.03
CSTF3-203ENST00000438862 BRPF1P55201 1214 aaPredicted RBP15.21■□□□□ 0.03
CSTF3-203ENST00000438862 SYNE4Q8N205 404 aa15.21■□□□□ 0.03
CSTF3-203ENST00000438862 HHIPL1Q96JK4 782 aa15.21■□□□□ 0.03
CSTF3-203ENST00000438862 KLRG2A4D1S0 409 aaPredicted RBP15.2■□□□□ 0.02
CSTF3-203ENST00000438862 ALDH1B1P30837 517 aa15.2■□□□□ 0.02
CSTF3-203ENST00000438862 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
CSTF3-203ENST00000438862 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
CSTF3-203ENST00000438862 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
CSTF3-203ENST00000438862 UBR2Q8IWV8 1755 aa15.2■□□□□ 0.02
CSTF3-203ENST00000438862 LTBP1Q14766 1721 aa15.2■□□□□ 0.02
CSTF3-203ENST00000438862 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
CSTF3-203ENST00000438862 FMR1Q06787 632 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSTF3-203ENST00000438862 PRPF38BQ5VTL8 546 aaKnown RBP15.19■□□□□ 0.02
CSTF3-203ENST00000438862 IL13P35225 146 aa15.18■□□□□ 0.02
CSTF3-203ENST00000438862 CLEC4GQ6UXB4 293 aa15.18■□□□□ 0.02
CSTF3-203ENST00000438862 SAPCD2Q86UD0 394 aa15.18■□□□□ 0.02
CSTF3-203ENST00000438862 NBPF5PQ86XG9 351 aaPredicted RBP15.18■□□□□ 0.02
CSTF3-203ENST00000438862 PSMD1Q99460 953 aa15.18■□□□□ 0.02
CSTF3-203ENST00000438862 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
CSTF3-203ENST00000438862 HEG1Q9ULI3 1381 aa15.16■□□□□ 0.02
CSTF3-203ENST00000438862 TRAF5O00463 557 aa15.16■□□□□ 0.02
CSTF3-203ENST00000438862 PYGBP11216 843 aa15.16■□□□□ 0.02
CSTF3-203ENST00000438862 EPS15P42566 896 aa15.16■□□□□ 0.02
CSTF3-203ENST00000438862 SCNN1DP51172 638 aa15.16■□□□□ 0.02
CSTF3-203ENST00000438862 TPTE2Q6XPS3 522 aa15.16■□□□□ 0.02
CSTF3-203ENST00000438862 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
CSTF3-203ENST00000438862 GRIPAP1Q4V328 841 aa15.15■□□□□ 0.02
CSTF3-203ENST00000438862 DCAF8Q5TAQ9 597 aa15.15■□□□□ 0.02
CSTF3-203ENST00000438862 CC2D2BQ6DHV5 1058 aa15.15■□□□□ 0.02
CSTF3-203ENST00000438862 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
CSTF3-203ENST00000438862 OLFM4Q6UX06 510 aa15.15■□□□□ 0.02
CSTF3-203ENST00000438862 MORC1Q86VD1 984 aa15.15■□□□□ 0.02
CSTF3-203ENST00000438862 DZIP3Q86Y13 1208 aaKnown RBP15.15■□□□□ 0.02
CSTF3-203ENST00000438862 ZNF652Q9Y2D9 606 aa15.15■□□□□ 0.02
CSTF3-203ENST00000438862 CELF2O95319 508 aaKnown RBP15.14■□□□□ 0.01
CSTF3-203ENST00000438862 IRX5P78411 483 aaPredicted RBP15.14■□□□□ 0.01
CSTF3-203ENST00000438862 CIAPIN1Q6FI81 312 aa15.14■□□□□ 0.01
CSTF3-203ENST00000438862 A1BGP04217 495 aa15.13■□□□□ 0.01
CSTF3-203ENST00000438862 NOGQ13253 232 aa15.13■□□□□ 0.01
CSTF3-203ENST00000438862 MTHFSDQ2M296 383 aaKnown RBP15.13■□□□□ 0.01
CSTF3-203ENST00000438862 ADARB2Q9NS39 739 aaKnown RBP15.13■□□□□ 0.01
CSTF3-203ENST00000438862 BCORQ6W2J9 1755 aa15.12■□□□□ 0.01
CSTF3-203ENST00000438862 RGL2O15211 777 aa15.12■□□□□ 0.01
CSTF3-203ENST00000438862 SOX10P56693 466 aa15.12■□□□□ 0.01
CSTF3-203ENST00000438862 TEFQ10587 303 aa15.12■□□□□ 0.01
CSTF3-203ENST00000438862 FMNL2Q96PY5 1086 aa15.12■□□□□ 0.01
CSTF3-203ENST00000438862 POLR3GLQ9BT43 218 aa15.11■□□□□ 0.01
CSTF3-203ENST00000438862 FBXO3Q9UK99 471 aa15.11■□□□□ 0.01
CSTF3-203ENST00000438862 SNED1Q8TER0 1413 aa15.1■□□□□ 0.01
CSTF3-203ENST00000438862 HMOX1P09601 288 aa15.1■□□□□ 0.01
CSTF3-203ENST00000438862 LARGE2Q8N3Y3 721 aa15.1■□□□□ 0.01
CSTF3-203ENST00000438862 PGAP2Q9UHJ9 254 aa15.1■□□□□ 0.01
CSTF3-203ENST00000438862 PCDHB8Q9UN66 801 aa15.1■□□□□ 0.01
CSTF3-203ENST00000438862 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
CSTF3-203ENST00000438862 GCC1Q96CN9 775 aa15.09■□□□□ 0.01
CSTF3-203ENST00000438862 PANK3Q9H999 370 aa15.09■□□□□ 0.01
CSTF3-203ENST00000438862 SAGE1Q9NXZ1 904 aa15.09■□□□□ 0.01
CSTF3-203ENST00000438862 GPRC5DQ9NZD1 345 aa15.09■□□□□ 0.01
CSTF3-203ENST00000438862 NIP7Q9Y221 180 aaKnown RBP eCLIP15.09■□□□□ 0.01
CSTF3-203ENST00000438862 GTF2E1P29083 439 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms