RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 RUFY3Q7L099 469 aa15.36■□□□□ 0.05
HCG18-236ENST00000438412 CHMP4AQ9BY43 222 aa15.36■□□□□ 0.05
HCG18-236ENST00000438412 TCHHQ07283 1943 aa15.36■□□□□ 0.05
HCG18-236ENST00000438412 ANAPC15P60006 121 aa15.35■□□□□ 0.05
HCG18-236ENST00000438412 CLEC17AQ6ZS10 378 aa15.35■□□□□ 0.05
HCG18-236ENST00000438412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.35■□□□□ 0.05
HCG18-236ENST00000438412 SLAIN2Q9P270 581 aa15.35■□□□□ 0.05
HCG18-236ENST00000438412 PKD1L3Q7Z443 1732 aa15.35■□□□□ 0.05
HCG18-236ENST00000438412 ARFGEF2Q9Y6D5 1785 aa15.35■□□□□ 0.05
HCG18-236ENST00000438412 PTPN12Q05209 780 aaKnown RBP15.35■□□□□ 0.05
HCG18-236ENST00000438412 CUL4AQ13619 759 aa15.35■□□□□ 0.05
HCG18-236ENST00000438412 KIAA1211Q6ZU35 1233 aa15.35■□□□□ 0.05
HCG18-236ENST00000438412 ZNF589Q86UQ0 364 aaPredicted RBP15.35■□□□□ 0.05
HCG18-236ENST00000438412 ZCRB1Q8TBF4 217 aaKnown RBP15.35■□□□□ 0.05
HCG18-236ENST00000438412 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
HCG18-236ENST00000438412 DBNLQ9UJU6 430 aaKnown RBP15.35■□□□□ 0.05
HCG18-236ENST00000438412 WDR17Q8IZU2 1322 aa15.34■□□□□ 0.05
HCG18-236ENST00000438412 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
HCG18-236ENST00000438412 RFX5P48382 616 aaPredicted RBP15.34■□□□□ 0.05
HCG18-236ENST00000438412 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
HCG18-236ENST00000438412 MRC1P22897 1456 aa15.34■□□□□ 0.05
HCG18-236ENST00000438412 JAKMIP1Q96N16 626 aaKnown RBP15.34■□□□□ 0.05
HCG18-236ENST00000438412 TTC14Q96N46 770 aa15.34■□□□□ 0.05
HCG18-236ENST00000438412 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
HCG18-236ENST00000438412 CPDO75976 1380 aa15.33■□□□□ 0.05
HCG18-236ENST00000438412 KLHL40Q2TBA0 621 aa15.33■□□□□ 0.04
HCG18-236ENST00000438412 ZNF594Q96JF6 807 aaPredicted RBP15.33■□□□□ 0.04
HCG18-236ENST00000438412 FSD1Q9BTV5 496 aa15.33■□□□□ 0.04
HCG18-236ENST00000438412 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.04
HCG18-236ENST00000438412 LMBR1LQ6UX01 489 aa15.33■□□□□ 0.04
HCG18-236ENST00000438412 CCDC129Q6ZRS4 1044 aa15.33■□□□□ 0.04
HCG18-236ENST00000438412 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
HCG18-236ENST00000438412 DBNDD2Q9BQY9 259 aa15.33■□□□□ 0.04
HCG18-236ENST00000438412 BRD1O95696 1058 aa15.32■□□□□ 0.04
HCG18-236ENST00000438412 MRE11P49959 708 aa15.32■□□□□ 0.04
HCG18-236ENST00000438412 SEC62Q99442 399 aaKnown RBP15.32■□□□□ 0.04
HCG18-236ENST00000438412 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
HCG18-236ENST00000438412 STRCQ7RTU9 1775 aa15.32■□□□□ 0.04
HCG18-236ENST00000438412 EVI5LQ96CN4 794 aa15.32■□□□□ 0.04
HCG18-236ENST00000438412 GPATCH3Q96I76 525 aa15.32■□□□□ 0.04
HCG18-236ENST00000438412 DNAJC2Q99543 621 aaKnown RBP15.32■□□□□ 0.04
HCG18-236ENST00000438412 COL15A1P39059 1388 aa15.31■□□□□ 0.04
HCG18-236ENST00000438412 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
HCG18-236ENST00000438412 CASP7P55210 303 aa15.31■□□□□ 0.04
HCG18-236ENST00000438412 SKOR2Q2VWA4 1001 aaPredicted RBP15.31■□□□□ 0.04
HCG18-236ENST00000438412 ZSCAN23Q3MJ62 389 aa15.31■□□□□ 0.04
HCG18-236ENST00000438412 NECAB1Q8N987 351 aa15.31■□□□□ 0.04
HCG18-236ENST00000438412 TMEM63CQ9P1W3 806 aa15.31■□□□□ 0.04
HCG18-236ENST00000438412 RBM8AQ9Y5S9 174 aaKnown RBP15.31■□□□□ 0.04
HCG18-236ENST00000438412 KDM4FA0A1W2PPD8 638 aa15.31■□□□□ 0.04
HCG18-236ENST00000438412 GADD45BO75293 160 aaPredicted RBP15.31■□□□□ 0.04
HCG18-236ENST00000438412 CCDC83Q8IWF9 413 aa15.31■□□□□ 0.04
HCG18-236ENST00000438412 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
HCG18-236ENST00000438412 LMTK3Q96Q04 1460 aa15.3■□□□□ 0.04
HCG18-236ENST00000438412 KCNJ4P48050 445 aa15.3■□□□□ 0.04
HCG18-236ENST00000438412 ST3GAL1Q11201 340 aa15.3■□□□□ 0.04
HCG18-236ENST00000438412 TNNI3KQ59H18 835 aa15.3■□□□□ 0.04
HCG18-236ENST00000438412 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
HCG18-236ENST00000438412 FPGT-TNNI3KV9GXZ4 949 aa15.3■□□□□ 0.04
HCG18-236ENST00000438412 PCDH11XQ9BZA7 1347 aa15.3■□□□□ 0.04
HCG18-236ENST00000438412 PCDH11YQ9BZA8 1340 aa15.3■□□□□ 0.04
HCG18-236ENST00000438412 SOS2Q07890 1332 aaPredicted RBP15.29■□□□□ 0.04
HCG18-236ENST00000438412 IL2RBP14784 551 aa15.29■□□□□ 0.04
HCG18-236ENST00000438412 MCM2P49736 904 aa15.29■□□□□ 0.04
HCG18-236ENST00000438412 EVA1CP58658 441 aa15.29■□□□□ 0.04
HCG18-236ENST00000438412 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
HCG18-236ENST00000438412 PLBD2Q8NHP8 589 aa15.29■□□□□ 0.04
HCG18-236ENST00000438412 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
HCG18-236ENST00000438412 TIMM10P62072 90 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 FOXO4P98177 505 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 NECTIN1Q15223 517 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 LRRC24Q50LG9 513 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 CREB3L3Q68CJ9 461 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 IL17RAQ96F46 866 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 ERBB4Q15303 1308 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 SYCE3A1L190 88 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
HCG18-236ENST00000438412 PUS3Q9BZE2 481 aaKnown RBP15.28■□□□□ 0.04
HCG18-236ENST00000438412 COPRSQ9NQ92 184 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 SHANK3Q9BYB0 1731 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 KCPQ6ZWJ8 1503 aa15.28■□□□□ 0.04
HCG18-236ENST00000438412 RABL6Q3YEC7 729 aaPredicted RBP15.27■□□□□ 0.03
HCG18-236ENST00000438412 NEUROD6Q96NK8 337 aa15.27■□□□□ 0.03
HCG18-236ENST00000438412 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.03
HCG18-236ENST00000438412 A0A0G2JLW4 131 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 SLC27A2O14975 620 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 ME3Q16798 604 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 RUFY2Q8WXA3 655 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 INTS4Q96HW7 963 aaKnown RBP15.26■□□□□ 0.03
HCG18-236ENST00000438412 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 TOGARAM1Q9Y4F4 1720 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 BTG4Q9NY30 223 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 TPCN1Q9ULQ1 816 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 CNPY2Q9Y2B0 182 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
HCG18-236ENST00000438412 PARP4Q9UKK3 1724 aaKnown RBP15.25■□□□□ 0.03
HCG18-236ENST00000438412 SYT1P21579 422 aa15.25■□□□□ 0.03
HCG18-236ENST00000438412 ATG9AQ7Z3C6 839 aa15.25■□□□□ 0.03
HCG18-236ENST00000438412 MAP4K1Q92918 833 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms