RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 QTRT2Q9H974 415 aaKnown RBP31.35■■■□□ 2.61
CPNE1-216ENST00000437340 ATG3Q9NT62 314 aa31.35■■■□□ 2.61
CPNE1-216ENST00000437340 ECHDC1Q9NTX5 307 aa31.35■■■□□ 2.61
CPNE1-216ENST00000437340 H7C1W4 665 aa31.35■■■□□ 2.61
CPNE1-216ENST00000437340 PRIM1P49642 420 aaKnown RBP31.35■■■□□ 2.61
CPNE1-216ENST00000437340 SYTL4Q96C24 671 aaPredicted RBP31.35■■■□□ 2.61
CPNE1-216ENST00000437340 ASAP1Q9ULH1 1129 aa31.35■■■□□ 2.61
CPNE1-216ENST00000437340 CWC25Q9NXE8 425 aaPredicted RBP31.34■■■□□ 2.61
CPNE1-216ENST00000437340 CCDC191Q8NCU4 936 aa31.33■■■□□ 2.61
CPNE1-216ENST00000437340 ACSBG1Q96GR2 724 aa31.33■■■□□ 2.61
CPNE1-216ENST00000437340 CD2BP2O95400 341 aaKnown RBP31.32■■■□□ 2.6
CPNE1-216ENST00000437340 STARD3NLO95772 234 aa31.32■■■□□ 2.6
CPNE1-216ENST00000437340 RFX5P48382 616 aaPredicted RBP31.32■■■□□ 2.6
CPNE1-216ENST00000437340 AACSQ86V21 672 aa31.32■■■□□ 2.6
CPNE1-216ENST00000437340 SPRYD3Q8NCJ5 442 aa31.32■■■□□ 2.6
CPNE1-216ENST00000437340 MCCP23508 829 aa31.31■■■□□ 2.6
CPNE1-216ENST00000437340 ONECUT3O60422 494 aaPredicted RBP31.3■■■□□ 2.6
CPNE1-216ENST00000437340 FRAT2O75474 233 aaPredicted RBP31.3■■■□□ 2.6
CPNE1-216ENST00000437340 DDIT3P35638 169 aa31.3■■■□□ 2.6
CPNE1-216ENST00000437340 CIZ1Q9ULV3 898 aaPredicted RBP31.29■■■□□ 2.6
CPNE1-216ENST00000437340 AK9Q5TCS8 1911 aa31.29■■■□□ 2.6
CPNE1-216ENST00000437340 ANAPC15P60006 121 aa31.28■■■□□ 2.6
CPNE1-216ENST00000437340 PTPN12Q05209 780 aaKnown RBP31.28■■■□□ 2.6
CPNE1-216ENST00000437340 DNAJC10Q8IXB1 793 aa31.28■■■□□ 2.6
CPNE1-216ENST00000437340 EAF2Q96CJ1 260 aaPredicted RBP31.28■■■□□ 2.6
CPNE1-216ENST00000437340 IL17RAQ96F46 866 aa31.28■■■□□ 2.6
CPNE1-216ENST00000437340 BRWD3Q6RI45 1802 aa31.27■■■□□ 2.6
CPNE1-216ENST00000437340 SIL1Q9H173 461 aa31.27■■■□□ 2.6
CPNE1-216ENST00000437340 ZBTB3Q9H5J0 574 aa31.27■■■□□ 2.6
CPNE1-216ENST00000437340 ST18O60284 1047 aa31.26■■■□□ 2.59
CPNE1-216ENST00000437340 SEPT12Q8IYM1 358 aa31.26■■■□□ 2.59
CPNE1-216ENST00000437340 JARID2Q92833 1246 aaPredicted RBP31.26■■■□□ 2.59
CPNE1-216ENST00000437340 ANO2Q9NQ90 1003 aa31.26■■■□□ 2.59
CPNE1-216ENST00000437340 MAP4K4O95819 1239 aaPredicted RBP31.25■■■□□ 2.59
CPNE1-216ENST00000437340 TRIM28Q13263 835 aaKnown RBP31.25■■■□□ 2.59
CPNE1-216ENST00000437340 ISCA1Q9BUE6 129 aa31.25■■■□□ 2.59
CPNE1-216ENST00000437340 FOXO4P98177 505 aa31.25■■■□□ 2.59
CPNE1-216ENST00000437340 IL27Q8NEV9 243 aa31.25■■■□□ 2.59
CPNE1-216ENST00000437340 TJP1Q07157 1748 aa31.24■■■□□ 2.59
CPNE1-216ENST00000437340 SBF2Q86WG5 1849 aa31.24■■■□□ 2.59
CPNE1-216ENST00000437340 NHSQ6T4R5 1651 aa31.24■■■□□ 2.59
CPNE1-216ENST00000437340 SGSM2O43147 1006 aa31.24■■■□□ 2.59
CPNE1-216ENST00000437340 KLHDC4Q8TBB5 520 aa31.24■■■□□ 2.59
CPNE1-216ENST00000437340 EVI5LQ96CN4 794 aa31.24■■■□□ 2.59
CPNE1-216ENST00000437340 TCIRG1Q13488 830 aa31.23■■■□□ 2.59
CPNE1-216ENST00000437340 KIF6Q6ZMV9 814 aa31.23■■■□□ 2.59
CPNE1-216ENST00000437340 KCNQ2O43526 872 aa31.22■■■□□ 2.59
CPNE1-216ENST00000437340 LMBR1LQ6UX01 489 aa31.22■■■□□ 2.59
CPNE1-216ENST00000437340 HSP90AA1P07900 732 aaKnown RBP31.22■■■□□ 2.59
CPNE1-216ENST00000437340 ZNF772Q68DY9 489 aaPredicted RBP31.22■■■□□ 2.59
CPNE1-216ENST00000437340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.22■■■□□ 2.59
CPNE1-216ENST00000437340 FAM182BQ5T319 152 aa31.21■■■□□ 2.59
CPNE1-216ENST00000437340 RUFY2Q8WXA3 655 aa31.2■■■□□ 2.59
CPNE1-216ENST00000437340 CCDC8Q9H0W5 538 aaPredicted RBP31.2■■■□□ 2.59
CPNE1-216ENST00000437340 BTAF1O14981 1849 aa31.2■■■□□ 2.58
CPNE1-216ENST00000437340 CYP19A1P11511 503 aaPredicted RBP31.19■■■□□ 2.58
CPNE1-216ENST00000437340 SLC4A9Q96Q91 983 aa31.19■■■□□ 2.58
CPNE1-216ENST00000437340 HIP1O00291 1037 aa31.17■■■□□ 2.58
CPNE1-216ENST00000437340 IL25Q9H293 177 aa31.17■■■□□ 2.58
CPNE1-216ENST00000437340 DIAPH3Q9NSV4 1193 aa31.17■■■□□ 2.58
CPNE1-216ENST00000437340 MAP3K15Q6ZN16 1313 aa31.17■■■□□ 2.58
CPNE1-216ENST00000437340 RAD50Q92878 1312 aa31.17■■■□□ 2.58
CPNE1-216ENST00000437340 DEKP35659 375 aaKnown RBP31.17■■■□□ 2.58
CPNE1-216ENST00000437340 TNNI3KQ59H18 835 aa31.17■■■□□ 2.58
CPNE1-216ENST00000437340 FPGT-TNNI3KV9GXZ4 949 aa31.17■■■□□ 2.58
CPNE1-216ENST00000437340 HSPA4P34932 840 aa31.16■■■□□ 2.58
CPNE1-216ENST00000437340 TLR7Q9NYK1 1049 aaKnown RBP31.16■■■□□ 2.58
CPNE1-216ENST00000437340 CICQ96RK0 1608 aaPredicted RBP31.16■■■□□ 2.58
CPNE1-216ENST00000437340 MCM2P49736 904 aa31.15■■■□□ 2.58
CPNE1-216ENST00000437340 TFCP2Q12800 502 aa31.15■■■□□ 2.58
CPNE1-216ENST00000437340 GIGYF2Q6Y7W6 1299 aaKnown RBP31.15■■■□□ 2.58
CPNE1-216ENST00000437340 ZNF330Q9Y3S2 320 aaPredicted RBP31.15■■■□□ 2.58
CPNE1-216ENST00000437340 HSP90AB3PQ58FF7 597 aa31.14■■■□□ 2.58
CPNE1-216ENST00000437340 CWC27Q6UX04 472 aaKnown RBP31.14■■■□□ 2.58
CPNE1-216ENST00000437340 KIAA1211Q6ZU35 1233 aa31.14■■■□□ 2.58
CPNE1-216ENST00000437340 PTF1AQ7RTS3 328 aa31.14■■■□□ 2.58
CPNE1-216ENST00000437340 LSG1Q9H089 658 aaKnown RBP31.14■■■□□ 2.58
CPNE1-216ENST00000437340 PALLDQ8WX93 1383 aa31.13■■■□□ 2.57
CPNE1-216ENST00000437340 PCCAP05165 728 aaPredicted RBP31.13■■■□□ 2.57
CPNE1-216ENST00000437340 RBM6P78332 1123 aaKnown RBP31.13■■■□□ 2.57
CPNE1-216ENST00000437340 GPR108Q9NPR9 543 aa31.13■■■□□ 2.57
CPNE1-216ENST00000437340 PALD1Q9ULE6 856 aa31.13■■■□□ 2.57
CPNE1-216ENST00000437340 PLA2G12BQ9BX93 195 aa31.12■■■□□ 2.57
CPNE1-216ENST00000437340 CHMP3Q9Y3E7 222 aa31.12■■■□□ 2.57
CPNE1-216ENST00000437340 ATP5JP18859 108 aa31.12■■■□□ 2.57
CPNE1-216ENST00000437340 IL15P40933 162 aaPredicted RBP31.11■■■□□ 2.57
CPNE1-216ENST00000437340 NEK4P51957 841 aa31.11■■■□□ 2.57
CPNE1-216ENST00000437340 DBNLQ9UJU6 430 aaKnown RBP31.11■■■□□ 2.57
CPNE1-216ENST00000437340 IL6STP40189 918 aaPredicted RBP31.1■■■□□ 2.57
CPNE1-216ENST00000437340 RAB3GAP1Q15042 981 aa31.1■■■□□ 2.57
CPNE1-216ENST00000437340 ZNF831Q5JPB2 1677 aa31.1■■■□□ 2.57
CPNE1-216ENST00000437340 CIAO1O76071 339 aa31.1■■■□□ 2.57
CPNE1-216ENST00000437340 MCM4P33991 863 aa31.1■■■□□ 2.57
CPNE1-216ENST00000437340 ATG9AQ7Z3C6 839 aa31.1■■■□□ 2.57
CPNE1-216ENST00000437340 ZBTB38Q8NAP3 1195 aaPredicted RBP31.1■■■□□ 2.57
CPNE1-216ENST00000437340 BOLA2Q9H3K6 86 aa31.1■■■□□ 2.57
CPNE1-216ENST00000437340 SNRKQ9NRH2 765 aa31.09■■■□□ 2.57
CPNE1-216ENST00000437340 FBXO3Q9UK99 471 aa31.09■■■□□ 2.57
CPNE1-216ENST00000437340 ZBTB1Q9Y2K1 713 aa31.09■■■□□ 2.57
CPNE1-216ENST00000437340 SMARCC1Q92922 1105 aaPredicted RBP31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms